RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 PRRT3Q5FWE3 981 aa6.9□□□□□ -1.3
CBX5-203ENST00000547872 USPL1Q5W0Q7 1092 aa6.9□□□□□ -1.3
CBX5-203ENST00000547872 DMRTC2Q8IXT2 367 aaPredicted RBP6.9□□□□□ -1.3
CBX5-203ENST00000547872 CACTIN-AS1Q8N1I8 211 aa6.9□□□□□ -1.3
CBX5-203ENST00000547872 LACRTQ9GZZ8 138 aa6.9□□□□□ -1.3
CBX5-203ENST00000547872 DZANK1Q9NVP4 752 aa6.9□□□□□ -1.3
CBX5-203ENST00000547872 KDM5CP41229 1560 aa6.9□□□□□ -1.31
CBX5-203ENST00000547872 PTPRAP18433 802 aa6.89□□□□□ -1.31
CBX5-203ENST00000547872 MAPK8P45983 427 aa6.89□□□□□ -1.31
CBX5-203ENST00000547872 TRIM28Q13263 835 aaKnown RBP6.89□□□□□ -1.31
CBX5-203ENST00000547872 ALYREFQ86V81 257 aaKnown RBP6.89□□□□□ -1.31
CBX5-203ENST00000547872 GALNT12Q8IXK2 581 aa6.89□□□□□ -1.31
CBX5-203ENST00000547872 IL22RA1Q8N6P7 574 aa6.89□□□□□ -1.31
CBX5-203ENST00000547872 ZKSCAN3Q9BRR0 538 aa6.89□□□□□ -1.31
CBX5-203ENST00000547872 PLCH2O75038 1416 aa6.89□□□□□ -1.31
CBX5-203ENST00000547872 ITSN2Q9NZM3 1697 aa6.89□□□□□ -1.31
CBX5-203ENST00000547872 MROH2AA6NES4 1674 aa6.88□□□□□ -1.31
CBX5-203ENST00000547872 PNMA6FA0A0J9YX94 578 aa6.88□□□□□ -1.31
CBX5-203ENST00000547872 PDE2AO00408 941 aaPredicted RBP6.88□□□□□ -1.31
CBX5-203ENST00000547872 TRPA1O75762 1119 aa6.88□□□□□ -1.31
CBX5-203ENST00000547872 CDC27P30260 824 aa6.88□□□□□ -1.31
CBX5-203ENST00000547872 RASSF7Q02833 373 aa6.88□□□□□ -1.31
CBX5-203ENST00000547872 DSC3Q14574 896 aa6.88□□□□□ -1.31
CBX5-203ENST00000547872 TMEM102Q8N9M5 508 aaPredicted RBP6.88□□□□□ -1.31
CBX5-203ENST00000547872 CCDC74AQ96AQ1 378 aa6.88□□□□□ -1.31
CBX5-203ENST00000547872 NPHS2Q9NP85 383 aa6.88□□□□□ -1.31
CBX5-203ENST00000547872 LATS2Q9NRM7 1088 aa6.88□□□□□ -1.31
CBX5-203ENST00000547872 PRXQ9BXM0 1461 aa6.87□□□□□ -1.31
CBX5-203ENST00000547872 FAM229AH3BQW9 127 aa6.87□□□□□ -1.31
CBX5-203ENST00000547872 GADD45BO75293 160 aaPredicted RBP6.87□□□□□ -1.31
CBX5-203ENST00000547872 COL8A1P27658 744 aa6.87□□□□□ -1.31
CBX5-203ENST00000547872 ATP2B2Q01814 1243 aa6.87□□□□□ -1.31
CBX5-203ENST00000547872 FMR1Q06787 632 aaKnown RBP eCLIP6.87□□□□□ -1.31
CBX5-203ENST00000547872 TMCO4Q5TGY1 634 aa6.87□□□□□ -1.31
CBX5-203ENST00000547872 EFCAB2Q5VUJ9 269 aa6.87□□□□□ -1.31
CBX5-203ENST00000547872 PEAR1Q5VY43 1037 aaPredicted RBP6.87□□□□□ -1.31
CBX5-203ENST00000547872 ASAP3Q8TDY4 903 aa6.87□□□□□ -1.31
CBX5-203ENST00000547872 POP1Q99575 1024 aaKnown RBP6.87□□□□□ -1.31
CBX5-203ENST00000547872 MUC3BQ9H195 1237 aa6.87□□□□□ -1.31
CBX5-203ENST00000547872 EHD4Q9H223 541 aa6.87□□□□□ -1.31
CBX5-203ENST00000547872 SETD1BQ9UPS6 1966 aaKnown RBP6.87□□□□□ -1.31
CBX5-203ENST00000547872 ALKQ9UM73 1620 aa6.87□□□□□ -1.31
CBX5-203ENST00000547872 CPS1P31327 1500 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 A0A0A0MRY4 1105 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 A0A1W2PP55 124 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 ANKRD33BA6NCL7 494 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 GDF11O95390 407 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 SPATA31C1P0DKV0 1188 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 CABP4P57796 275 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 ENOX2Q16206 610 aaKnown RBP6.86□□□□□ -1.31
CBX5-203ENST00000547872 FAM117BQ6P1L5 589 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 TMEM151AQ8N4L1 468 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 HHIPQ96QV1 700 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 LIN7BQ9HAP6 207 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 NLRP2Q9NX02 1062 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 RGS17Q9UGC6 210 aaPredicted RBP6.86□□□□□ -1.31
CBX5-203ENST00000547872 PPME1Q9Y570 386 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 KIDINS220Q9ULH0 1771 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 CDC42BPBQ9Y5S2 1711 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 RNF17Q9BXT8 1623 aaKnown RBP6.86□□□□□ -1.31
CBX5-203ENST00000547872 NEURL4Q96JN8 1562 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 REREQ9P2R6 1566 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 ABCC1P33527 1531 aa6.86□□□□□ -1.31
CBX5-203ENST00000547872 PLA2R1Q13018 1463 aa6.85□□□□□ -1.31
CBX5-203ENST00000547872 TCOF1Q13428 1488 aaKnown RBP6.85□□□□□ -1.31
CBX5-203ENST00000547872 SHANK2Q9UPX8 1470 aa6.85□□□□□ -1.31
CBX5-203ENST00000547872 CNTLNQ9NXG0 1405 aa6.85□□□□□ -1.31
CBX5-203ENST00000547872 ZMYM3Q14202 1370 aa6.85□□□□□ -1.31
CBX5-203ENST00000547872 NFKBIEO00221 500 aa6.85□□□□□ -1.31
CBX5-203ENST00000547872 APBA3O96018 575 aa6.85□□□□□ -1.31
CBX5-203ENST00000547872 CDC25BP30305 580 aa6.85□□□□□ -1.31
CBX5-203ENST00000547872 BAG6P46379 1132 aa6.85□□□□□ -1.31
CBX5-203ENST00000547872 GGT6Q6P531 493 aa6.85□□□□□ -1.31
CBX5-203ENST00000547872 DTWD1Q8N5C7 304 aa6.85□□□□□ -1.31
CBX5-203ENST00000547872 NXPE3Q969Y0 559 aa6.85□□□□□ -1.31
CBX5-203ENST00000547872 DCAF5Q96JK2 942 aa6.85□□□□□ -1.31
CBX5-203ENST00000547872 DNMT1P26358 1616 aaKnown RBP6.85□□□□□ -1.31
CBX5-203ENST00000547872 AGLP35573 1532 aa6.85□□□□□ -1.31
CBX5-203ENST00000547872 PTPRKQ15262 1439 aa6.84□□□□□ -1.31
CBX5-203ENST00000547872 LINC01387J3KSC0 135 aa6.84□□□□□ -1.31
CBX5-203ENST00000547872 P4HBP07237 508 aaKnown RBP6.84□□□□□ -1.31
CBX5-203ENST00000547872 KIAA0319Q5VV43 1072 aa6.84□□□□□ -1.31
CBX5-203ENST00000547872 ALG1LQ6GMV1 187 aa6.84□□□□□ -1.31
CBX5-203ENST00000547872 FMR1NBQ8N0W7 255 aaPredicted RBP6.84□□□□□ -1.31
CBX5-203ENST00000547872 DCAF11Q8TEB1 546 aa6.84□□□□□ -1.31
CBX5-203ENST00000547872 BSNDQ8WZ55 320 aa6.84□□□□□ -1.31
CBX5-203ENST00000547872 BHLHE41Q9C0J9 482 aaPredicted RBP6.84□□□□□ -1.31
CBX5-203ENST00000547872 ADAM19Q9H013 955 aa6.84□□□□□ -1.31
CBX5-203ENST00000547872 SRA1Q9HD15 236 aaKnown RBP6.84□□□□□ -1.31
CBX5-203ENST00000547872 SH2B1Q9NRF2 756 aaPredicted RBP6.84□□□□□ -1.31
CBX5-203ENST00000547872 NPATQ14207 1427 aa6.84□□□□□ -1.32
CBX5-203ENST00000547872 PREX2Q70Z35 1606 aa6.83□□□□□ -1.32
CBX5-203ENST00000547872 VWDEQ8N2E2 1590 aa6.83□□□□□ -1.32
CBX5-203ENST00000547872 STRCP1A6NGW2 1772 aa6.83□□□□□ -1.32
CBX5-203ENST00000547872 H3BRJ5 948 aa6.83□□□□□ -1.32
CBX5-203ENST00000547872 ELNP15502 786 aa6.83□□□□□ -1.32
CBX5-203ENST00000547872 EPHA1P21709 976 aa6.83□□□□□ -1.32
CBX5-203ENST00000547872 GSK3AP49840 483 aa6.83□□□□□ -1.32
CBX5-203ENST00000547872 TRIM26Q12899 539 aaPredicted RBP6.83□□□□□ -1.32
CBX5-203ENST00000547872 TXNDC11Q6PKC3 985 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms