RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 MAST3O60307 1309 aa14.58□□□□□ -0.08
RAB5C-204ENST00000547517 HMMRO75330 724 aa14.57□□□□□ -0.08
RAB5C-204ENST00000547517 VEGFBP49765 207 aa14.57□□□□□ -0.08
RAB5C-204ENST00000547517 DEFB115Q30KQ5 88 aa14.57□□□□□ -0.08
RAB5C-204ENST00000547517 PRAMEF18Q5VWM3 479 aa14.57□□□□□ -0.08
RAB5C-204ENST00000547517 SAPCD2Q86UD0 394 aa14.57□□□□□ -0.08
RAB5C-204ENST00000547517 JMYQ8N9B5 988 aa14.57□□□□□ -0.08
RAB5C-204ENST00000547517 GBA2Q9HCG7 927 aaPredicted RBP14.57□□□□□ -0.08
RAB5C-204ENST00000547517 SUGT1Q9Y2Z0 365 aa14.57□□□□□ -0.08
RAB5C-204ENST00000547517 PAPPA2Q9BXP8 1791 aa14.56□□□□□ -0.08
RAB5C-204ENST00000547517 PRDX5P30044 214 aa14.56□□□□□ -0.08
RAB5C-204ENST00000547517 SIRT2Q8IXJ6 389 aa14.56□□□□□ -0.08
RAB5C-204ENST00000547517 RPAP2Q8IXW5 612 aaPredicted RBP14.56□□□□□ -0.08
RAB5C-204ENST00000547517 C2orf69Q8N8R5 385 aa14.56□□□□□ -0.08
RAB5C-204ENST00000547517 TEKT1Q969V4 418 aa14.56□□□□□ -0.08
RAB5C-204ENST00000547517 GPR108Q9NPR9 543 aa14.56□□□□□ -0.08
RAB5C-204ENST00000547517 LDHBP07195 334 aaKnown RBP14.55□□□□□ -0.08
RAB5C-204ENST00000547517 HUNKP57058 714 aa14.55□□□□□ -0.08
RAB5C-204ENST00000547517 SPDYE2Q495Y8 402 aa14.55□□□□□ -0.08
RAB5C-204ENST00000547517 CYP4F22Q6NT55 531 aa14.55□□□□□ -0.08
RAB5C-204ENST00000547517 PI16Q6UXB8 463 aa14.55□□□□□ -0.08
RAB5C-204ENST00000547517 ERC1Q8IUD2 1116 aa14.55□□□□□ -0.08
RAB5C-204ENST00000547517 CAPNS2Q96L46 248 aa14.55□□□□□ -0.08
RAB5C-204ENST00000547517 DBNDD2Q9BQY9 259 aa14.55□□□□□ -0.08
RAB5C-204ENST00000547517 TDRD3Q9H7E2 651 aaKnown RBP14.55□□□□□ -0.08
RAB5C-204ENST00000547517 TLR7Q9NYK1 1049 aaKnown RBP14.55□□□□□ -0.08
RAB5C-204ENST00000547517 PDS5AQ29RF7 1337 aaKnown RBP14.55□□□□□ -0.08
RAB5C-204ENST00000547517 SALL1Q9NSC2 1324 aa14.55□□□□□ -0.08
RAB5C-204ENST00000547517 THSD7BQ9C0I4 1608 aa14.55□□□□□ -0.08
RAB5C-204ENST00000547517 APBB1O00213 710 aa14.54□□□□□ -0.08
RAB5C-204ENST00000547517 ARID4AP29374 1257 aaPredicted RBP14.54□□□□□ -0.08
RAB5C-204ENST00000547517 HDLBPQ00341 1268 aaKnown RBP14.54□□□□□ -0.08
RAB5C-204ENST00000547517 DIXDC1Q155Q3 683 aa14.54□□□□□ -0.08
RAB5C-204ENST00000547517 HSP90AB4PQ58FF6 505 aa14.54□□□□□ -0.08
RAB5C-204ENST00000547517 TTC39AQ5SRH9 613 aa14.54□□□□□ -0.08
RAB5C-204ENST00000547517 ZGPATQ8N5A5 531 aaKnown RBP14.54□□□□□ -0.08
RAB5C-204ENST00000547517 DEFB129Q9H1M3 183 aa14.54□□□□□ -0.08
RAB5C-204ENST00000547517 ZNF70Q9UC06 446 aaPredicted RBP14.54□□□□□ -0.08
RAB5C-204ENST00000547517 ABCF2Q9UG63 623 aa14.54□□□□□ -0.08
RAB5C-204ENST00000547517 WDR33Q9C0J8 1336 aaKnown RBP14.54□□□□□ -0.08
RAB5C-204ENST00000547517 PCNTO95613 3336 aa14.53□□□□□ -0.08
RAB5C-204ENST00000547517 ZBTB22O15209 634 aa14.53□□□□□ -0.08
RAB5C-204ENST00000547517 NF2P35240 595 aa14.53□□□□□ -0.08
RAB5C-204ENST00000547517 ECE1P42892 770 aa14.53□□□□□ -0.08
RAB5C-204ENST00000547517 TTLL12Q14166 644 aaPredicted RBP14.53□□□□□ -0.08
RAB5C-204ENST00000547517 DZIP1Q86YF9 867 aaKnown RBP14.53□□□□□ -0.08
RAB5C-204ENST00000547517 SPATA5Q8NB90 893 aa14.53□□□□□ -0.08
RAB5C-204ENST00000547517 ZDHHC15Q96MV8 337 aa14.53□□□□□ -0.08
RAB5C-204ENST00000547517 CCDC8Q9H0W5 538 aaPredicted RBP14.53□□□□□ -0.08
RAB5C-204ENST00000547517 IL1RAPL2Q9NP60 686 aa14.53□□□□□ -0.08
RAB5C-204ENST00000547517 HMG20BQ9P0W2 317 aa14.53□□□□□ -0.08
RAB5C-204ENST00000547517 DBNLQ9UJU6 430 aaKnown RBP14.53□□□□□ -0.08
RAB5C-204ENST00000547517 PPP2R3BQ9Y5P8 575 aa14.53□□□□□ -0.08
RAB5C-204ENST00000547517 SSC5DA1L4H1 1573 aa14.52□□□□□ -0.08
RAB5C-204ENST00000547517 TCP10L2B9ZVM9 353 aa14.52□□□□□ -0.09
RAB5C-204ENST00000547517 UQCRFS1P1P0C7P4 283 aa14.52□□□□□ -0.09
RAB5C-204ENST00000547517 MCAMP43121 646 aa14.52□□□□□ -0.09
RAB5C-204ENST00000547517 CACNB3P54284 484 aa14.52□□□□□ -0.09
RAB5C-204ENST00000547517 TNFAIP1Q13829 316 aa14.52□□□□□ -0.09
RAB5C-204ENST00000547517 CCDC158Q5M9N0 1113 aa14.52□□□□□ -0.09
RAB5C-204ENST00000547517 HHIPL2Q6UWX4 724 aa14.52□□□□□ -0.09
RAB5C-204ENST00000547517 MOB2Q70IA6 237 aa14.52□□□□□ -0.09
RAB5C-204ENST00000547517 AACSQ86V21 672 aa14.52□□□□□ -0.09
RAB5C-204ENST00000547517 RHPN1Q8TCX5 695 aa14.52□□□□□ -0.09
RAB5C-204ENST00000547517 EAF2Q96CJ1 260 aaPredicted RBP14.52□□□□□ -0.09
RAB5C-204ENST00000547517 HHIPL1Q96JK4 782 aa14.52□□□□□ -0.09
RAB5C-204ENST00000547517 BCL11AQ9H165 835 aa14.52□□□□□ -0.09
RAB5C-204ENST00000547517 DAGLAQ9Y4D2 1042 aa14.52□□□□□ -0.09
RAB5C-204ENST00000547517 HSPA1AP0DMV8 641 aaKnown RBP14.51□□□□□ -0.09
RAB5C-204ENST00000547517 HSPA1BP0DMV9 641 aaKnown RBP14.51□□□□□ -0.09
RAB5C-204ENST00000547517 FKBP1BP68106 108 aa14.51□□□□□ -0.09
RAB5C-204ENST00000547517 PRKG1Q13976 671 aa14.51□□□□□ -0.09
RAB5C-204ENST00000547517 RASA3Q14644 834 aa14.51□□□□□ -0.09
RAB5C-204ENST00000547517 APOBEC3HQ6NTF7 200 aaKnown RBP14.51□□□□□ -0.09
RAB5C-204ENST00000547517 KIF1BPQ96EK5 621 aa14.51□□□□□ -0.09
RAB5C-204ENST00000547517 SNRKQ9NRH2 765 aa14.51□□□□□ -0.09
RAB5C-204ENST00000547517 TMOD2Q9NZR1 351 aa14.51□□□□□ -0.09
RAB5C-204ENST00000547517 MAST2Q6P0Q8 1798 aa14.5□□□□□ -0.09
RAB5C-204ENST00000547517 AOC2O75106 756 aa14.5□□□□□ -0.09
RAB5C-204ENST00000547517 SPTY2D1Q68D10 685 aaPredicted RBP14.5□□□□□ -0.09
RAB5C-204ENST00000547517 RGMBQ6NW40 437 aa14.5□□□□□ -0.09
RAB5C-204ENST00000547517 TBC1D9Q6ZT07 1266 aa14.5□□□□□ -0.09
RAB5C-204ENST00000547517 ERICH6Q7L0X2 663 aa14.5□□□□□ -0.09
RAB5C-204ENST00000547517 CRBNQ96SW2 442 aa14.5□□□□□ -0.09
RAB5C-204ENST00000547517 MRIQ9BWK5 157 aa14.5□□□□□ -0.09
RAB5C-204ENST00000547517 FZD1Q9UP38 647 aa14.5□□□□□ -0.09
RAB5C-204ENST00000547517 UBE2Q2LH0YL09 131 aa14.49□□□□□ -0.09
RAB5C-204ENST00000547517 RAB11FIP3O75154 756 aa14.49□□□□□ -0.09
RAB5C-204ENST00000547517 TNNI2P48788 182 aa14.49□□□□□ -0.09
RAB5C-204ENST00000547517 ZNF157P51786 506 aaPredicted RBP14.49□□□□□ -0.09
RAB5C-204ENST00000547517 MECOMQ03112 1051 aa14.49□□□□□ -0.09
RAB5C-204ENST00000547517 NBPF12Q5TAG4 269 aaPredicted RBP14.49□□□□□ -0.09
RAB5C-204ENST00000547517 CDAN1Q8IWY9 1227 aa14.49□□□□□ -0.09
RAB5C-204ENST00000547517 CLASRPQ8N2M8 674 aaKnown RBP14.49□□□□□ -0.09
RAB5C-204ENST00000547517 TMEM39BQ9GZU3 492 aa14.49□□□□□ -0.09
RAB5C-204ENST00000547517 MYH2Q9UKX2 1941 aa14.49□□□□□ -0.09
RAB5C-204ENST00000547517 GAKO14976 1311 aa14.48□□□□□ -0.09
RAB5C-204ENST00000547517 ARMC9Q7Z3E5 817 aa14.48□□□□□ -0.09
RAB5C-204ENST00000547517 TNS4Q8IZW8 715 aa14.48□□□□□ -0.09
RAB5C-204ENST00000547517 ZNF512BQ96KM6 892 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms