RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 KIAA1468Q9P260 1216 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 ABCC3O15438 1527 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 ZFYVE16Q7Z3T8 1539 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 RPS6KA5O75582 802 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 ZNF396Q96N95 335 aaPredicted RBP13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 ADGRB3O60242 1522 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 NCKAP5LQ9HCH0 1330 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 CTAGE15A4D2H0 777 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 NDUFAB1O14561 156 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 ZNF202O95125 648 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 CPP00450 1065 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 CTAGE8P0CG41 777 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 GNGT1P63211 74 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 HSP90AB2PQ58FF8 381 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 CTAGE6Q86UF2 777 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 CTAGE4Q8IX94 777 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 GSPT2Q8IYD1 628 aaKnown RBP13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 FAM76AQ8TAV0 307 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 TRIM6Q9C030 488 aaPredicted RBP13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 DEPDC5O75140 1603 aa13.63□□□□□ -0.23
RBFOX1-208ENST00000547372 CAMSAP1Q5T5Y3 1602 aa13.62□□□□□ -0.23
RBFOX1-208ENST00000547372 NECTIN1Q15223 517 aa13.62□□□□□ -0.23
RBFOX1-208ENST00000547372 RAB11FIP4Q86YS3 637 aa13.62□□□□□ -0.23
RBFOX1-208ENST00000547372 SEC62Q99442 399 aaKnown RBP13.62□□□□□ -0.23
RBFOX1-208ENST00000547372 GIGYF1O75420 1035 aaPredicted RBP13.62□□□□□ -0.23
RBFOX1-208ENST00000547372 IDI1Q13907 227 aa13.62□□□□□ -0.23
RBFOX1-208ENST00000547372 OTUD7BQ6GQQ9 843 aa13.62□□□□□ -0.23
RBFOX1-208ENST00000547372 MRPS27Q92552 414 aaKnown RBP13.62□□□□□ -0.23
RBFOX1-208ENST00000547372 NEUROD6Q96NK8 337 aa13.62□□□□□ -0.23
RBFOX1-208ENST00000547372 PA2G4Q9UQ80 394 aaKnown RBP13.62□□□□□ -0.23
RBFOX1-208ENST00000547372 GOLGA6CA6NDK9 693 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 GOLGA6DP0CG33 693 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 GBP2P32456 591 aaPredicted RBP13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 LONRF3Q496Y0 759 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 OLFM4Q6UX06 510 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 CEP112Q8N8E3 955 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 GOLGA6AQ9NYA3 693 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 ADCY9O60503 1353 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 PPP1R12BO60237 982 aaPredicted RBP13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 GGCXP38435 758 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 ARMC3Q5W041 872 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 GBP3Q9H0R5 595 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 IRAK1P51617 712 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 IQCA1Q86XH1 822 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 POTEDQ86YR6 584 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 CEP120Q8N960 986 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 ECHDC1Q9NTX5 307 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 IRAK4Q9NWZ3 460 aa13.61□□□□□ -0.23
RBFOX1-208ENST00000547372 NOA1Q8NC60 698 aaKnown RBP13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 ZKSCAN4Q969J2 545 aaPredicted RBP13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 MRPL44Q9H9J2 332 aaKnown RBP13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 PCDHA7Q9UN72 937 aa13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 CFAP65Q6ZU64 1925 aaKnown RBP13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 SLC27A2O14975 620 aa13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 CBFA2T2O43439 604 aa13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 STIM1Q13586 685 aa13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 NCAPH2Q6IBW4 605 aa13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 CAPZA3Q96KX2 299 aa13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 CPSF2Q9P2I0 782 aaKnown RBP13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 ADGRL3Q9HAR2 1447 aa13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 SOWAHDA6NJG2 315 aa13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 GPTP24298 496 aa13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 ATP1A2P50993 1020 aa13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 TRDNQ13061 729 aa13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 CEP85LQ5SZL2 805 aa13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 SSH3Q8TE77 659 aa13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 CDC5LQ99459 802 aaKnown RBP13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 CDC23Q9UJX2 597 aa13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 TUBGCP6Q96RT7 1819 aa13.6□□□□□ -0.23
RBFOX1-208ENST00000547372 EFCAB6Q5THR3 1501 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 POTEB2H3BUK9 544 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 A1BGP04217 495 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 MARCKSP29966 332 aaPredicted RBP13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 CAPS2Q9BXY5 557 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 CTAGE9A4FU28 777 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 PI4KAP2A4QPH2 592 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 RPS6KB1P23443 525 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 FMNL3Q8IVF7 1028 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 PI4KAP1Q8N8J0 262 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 USP44Q9H0E7 712 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 NCOA5Q9HCD5 579 aaKnown RBP13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 ANKRD26Q9UPS8 1709 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 GOLGA6L9A6NEM1 432 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 ENO4A6NNW6 628 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 CHUKO15111 745 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 CCDC175P0C221 793 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 CCNHP51946 323 aaPredicted RBP13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 TOB2Q14106 344 aaPredicted RBP13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 TEX11Q8IYF3 940 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 RCOR1Q9UKL0 485 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 SH3BP1Q9Y3L3 701 aa13.59□□□□□ -0.23
RBFOX1-208ENST00000547372 ARHGEF28Q8N1W1 1705 aaKnown RBP13.58□□□□□ -0.23
RBFOX1-208ENST00000547372 ABCA9Q8IUA7 1624 aa13.58□□□□□ -0.24
RBFOX1-208ENST00000547372 MRPS25P82663 173 aaKnown RBP13.58□□□□□ -0.24
RBFOX1-208ENST00000547372 GRIPAP1Q4V328 841 aa13.58□□□□□ -0.24
RBFOX1-208ENST00000547372 Q6ZUG5 572 aa13.58□□□□□ -0.24
RBFOX1-208ENST00000547372 CHST3Q7LGC8 479 aa13.58□□□□□ -0.24
RBFOX1-208ENST00000547372 CCDC148Q8NFR7 591 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms