RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 SLC10A4Q96EP9 437 aa17.97■□□□□ 0.47
COL2A1-209ENST00000546974 TDRD3Q9H7E2 651 aaKnown RBP17.97■□□□□ 0.47
COL2A1-209ENST00000546974 MYH13Q9UKX3 1938 aa17.97■□□□□ 0.47
COL2A1-209ENST00000546974 SLC5A1P13866 664 aa17.96■□□□□ 0.47
COL2A1-209ENST00000546974 GRIK5Q16478 980 aa17.96■□□□□ 0.47
COL2A1-209ENST00000546974 ATG9AQ7Z3C6 839 aa17.96■□□□□ 0.47
COL2A1-209ENST00000546974 LPIN2Q92539 896 aa17.96■□□□□ 0.47
COL2A1-209ENST00000546974 MRIQ9BWK5 157 aa17.96■□□□□ 0.47
COL2A1-209ENST00000546974 SUGT1Q9Y2Z0 365 aa17.96■□□□□ 0.47
COL2A1-209ENST00000546974 USP2O75604 605 aaPredicted RBP17.95■□□□□ 0.46
COL2A1-209ENST00000546974 CIAO1O76071 339 aa17.95■□□□□ 0.46
COL2A1-209ENST00000546974 IREB2P48200 963 aaKnown RBP17.95■□□□□ 0.46
COL2A1-209ENST00000546974 LAMB1P07942 1786 aa17.94■□□□□ 0.46
COL2A1-209ENST00000546974 MANSC4A6NHS7 340 aaPredicted RBP17.94■□□□□ 0.46
COL2A1-209ENST00000546974 TBC1D8O95759 1140 aa17.94■□□□□ 0.46
COL2A1-209ENST00000546974 ZBTB48P10074 688 aaPredicted RBP17.94■□□□□ 0.46
COL2A1-209ENST00000546974 TNNI2P48788 182 aa17.94■□□□□ 0.46
COL2A1-209ENST00000546974 INHBEP58166 350 aa17.94■□□□□ 0.46
COL2A1-209ENST00000546974 NOM1Q5C9Z4 860 aaKnown RBP17.94■□□□□ 0.46
COL2A1-209ENST00000546974 TEKT1Q969V4 418 aa17.94■□□□□ 0.46
COL2A1-209ENST00000546974 CFHR5Q9BXR6 569 aa17.94■□□□□ 0.46
COL2A1-209ENST00000546974 LRRFIP2Q9Y608 721 aaKnown RBP17.94■□□□□ 0.46
COL2A1-209ENST00000546974 RGS19P49795 217 aa17.93■□□□□ 0.46
COL2A1-209ENST00000546974 INTS3Q68E01 1043 aaKnown RBP17.93■□□□□ 0.46
COL2A1-209ENST00000546974 CTU1Q7Z7A3 348 aaKnown RBP17.93■□□□□ 0.46
COL2A1-209ENST00000546974 WNK4Q96J92 1243 aa17.93■□□□□ 0.46
COL2A1-209ENST00000546974 CLMNQ96JQ2 1002 aa17.93■□□□□ 0.46
COL2A1-209ENST00000546974 SIL1Q9H173 461 aa17.93■□□□□ 0.46
COL2A1-209ENST00000546974 CEP126Q9P2H0 1117 aa17.93■□□□□ 0.46
COL2A1-209ENST00000546974 MAST3O60307 1309 aa17.93■□□□□ 0.46
COL2A1-209ENST00000546974 TCP10L2B9ZVM9 353 aa17.92■□□□□ 0.46
COL2A1-209ENST00000546974 ALDH1A1P00352 501 aa17.92■□□□□ 0.46
COL2A1-209ENST00000546974 IL15P40933 162 aaPredicted RBP17.92■□□□□ 0.46
COL2A1-209ENST00000546974 ANKRD13AQ8IZ07 590 aa17.92■□□□□ 0.46
COL2A1-209ENST00000546974 WDR66Q8TBY9 1149 aa17.92■□□□□ 0.46
COL2A1-209ENST00000546974 ZDHHC15Q96MV8 337 aa17.92■□□□□ 0.46
COL2A1-209ENST00000546974 TEPSINQ96N21 525 aa17.92■□□□□ 0.46
COL2A1-209ENST00000546974 MEIS3Q99687 375 aa17.92■□□□□ 0.46
COL2A1-209ENST00000546974 COPRSQ9NQ92 184 aa17.92■□□□□ 0.46
COL2A1-209ENST00000546974 GPR25O00155 361 aa17.91■□□□□ 0.46
COL2A1-209ENST00000546974 IPO8O15397 1037 aaKnown RBP17.91■□□□□ 0.46
COL2A1-209ENST00000546974 GNAI3P08754 354 aa17.91■□□□□ 0.46
COL2A1-209ENST00000546974 ATP2B3Q16720 1220 aa17.91■□□□□ 0.46
COL2A1-209ENST00000546974 HHIPL2Q6UWX4 724 aa17.91■□□□□ 0.46
COL2A1-209ENST00000546974 ZNF296Q8WUU4 475 aaPredicted RBP17.91■□□□□ 0.46
COL2A1-209ENST00000546974 OTOFQ9HC10 1997 aa17.9■□□□□ 0.46
COL2A1-209ENST00000546974 APOBEC3HQ6NTF7 200 aaKnown RBP17.9■□□□□ 0.46
COL2A1-209ENST00000546974 TMEM39BQ9GZU3 492 aa17.9■□□□□ 0.46
COL2A1-209ENST00000546974 GNL3LQ9NVN8 582 aaKnown RBP17.9■□□□□ 0.46
COL2A1-209ENST00000546974 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.9■□□□□ 0.46
COL2A1-209ENST00000546974 PA2G4Q9UQ80 394 aaKnown RBP17.9■□□□□ 0.46
COL2A1-209ENST00000546974 ZBTB22O15209 634 aa17.89■□□□□ 0.45
COL2A1-209ENST00000546974 PKN2Q16513 984 aaKnown RBP17.89■□□□□ 0.45
COL2A1-209ENST00000546974 FKBP1CQ5VVH2 108 aa17.89■□□□□ 0.45
COL2A1-209ENST00000546974 FAM83AQ86UY5 434 aa17.89■□□□□ 0.45
COL2A1-209ENST00000546974 IFNL1Q8IU54 200 aa17.89■□□□□ 0.45
COL2A1-209ENST00000546974 CDAN1Q8IWY9 1227 aa17.89■□□□□ 0.45
COL2A1-209ENST00000546974 TMOD2Q9NZR1 351 aa17.89■□□□□ 0.45
COL2A1-209ENST00000546974 GJA5P36382 358 aa17.88■□□□□ 0.45
COL2A1-209ENST00000546974 TESPA1A2RU30 521 aaPredicted RBP17.87■□□□□ 0.45
COL2A1-209ENST00000546974 SEMA3EO15041 775 aa17.87■□□□□ 0.45
COL2A1-209ENST00000546974 FKTNO75072 461 aa17.87■□□□□ 0.45
COL2A1-209ENST00000546974 TRIM27P14373 513 aa17.87■□□□□ 0.45
COL2A1-209ENST00000546974 CACNB3P54284 484 aa17.87■□□□□ 0.45
COL2A1-209ENST00000546974 MAP3K9P80192 1104 aa17.87■□□□□ 0.45
COL2A1-209ENST00000546974 MTX1Q13505 466 aa17.87■□□□□ 0.45
COL2A1-209ENST00000546974 ATF7IPQ6VMQ6 1270 aa17.87■□□□□ 0.45
COL2A1-209ENST00000546974 R3HDMLQ9H3Y0 253 aa17.87■□□□□ 0.45
COL2A1-209ENST00000546974 ELP3Q9H9T3 547 aa17.87■□□□□ 0.45
COL2A1-209ENST00000546974 DENND2AQ9ULE3 1009 aa17.87■□□□□ 0.45
COL2A1-209ENST00000546974 IGF2BP3O00425 579 aaKnown RBP eCLIP17.86■□□□□ 0.45
COL2A1-209ENST00000546974 SRGAP3O43295 1099 aa17.86■□□□□ 0.45
COL2A1-209ENST00000546974 BCAR3O75815 825 aa17.86■□□□□ 0.45
COL2A1-209ENST00000546974 MLLT1Q03111 559 aaPredicted RBP17.86■□□□□ 0.45
COL2A1-209ENST00000546974 OTUD7BQ6GQQ9 843 aa17.86■□□□□ 0.45
COL2A1-209ENST00000546974 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.86■□□□□ 0.45
COL2A1-209ENST00000546974 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.86■□□□□ 0.45
COL2A1-209ENST00000546974 OPTNQ96CV9 577 aa17.86■□□□□ 0.45
COL2A1-209ENST00000546974 HOOK2Q96ED9 719 aa17.86■□□□□ 0.45
COL2A1-209ENST00000546974 SALL1Q9NSC2 1324 aa17.86■□□□□ 0.45
COL2A1-209ENST00000546974 PHKA1P46020 1223 aa17.85■□□□□ 0.45
COL2A1-209ENST00000546974 FRAT1Q92837 279 aaPredicted RBP17.85■□□□□ 0.45
COL2A1-209ENST00000546974 AK9Q5TCS8 1911 aa17.84■□□□□ 0.45
COL2A1-209ENST00000546974 RPAP1Q9BWH6 1393 aaPredicted RBP17.84■□□□□ 0.45
COL2A1-209ENST00000546974 GNAI2P04899 355 aa17.84■□□□□ 0.45
COL2A1-209ENST00000546974 LDHBP07195 334 aaKnown RBP17.84■□□□□ 0.45
COL2A1-209ENST00000546974 PRDX5P30044 214 aa17.84■□□□□ 0.45
COL2A1-209ENST00000546974 ADORA1P30542 326 aa17.84■□□□□ 0.45
COL2A1-209ENST00000546974 VGLL4Q14135 290 aa17.84■□□□□ 0.45
COL2A1-209ENST00000546974 CCDC102BQ68D86 513 aa17.84■□□□□ 0.45
COL2A1-209ENST00000546974 MIER1Q8N108 512 aa17.84■□□□□ 0.45
COL2A1-209ENST00000546974 AKAP2Q9Y2D5 859 aa17.84■□□□□ 0.45
COL2A1-209ENST00000546974 DAGLAQ9Y4D2 1042 aa17.84■□□□□ 0.45
COL2A1-209ENST00000546974 CSADQ9Y600 493 aa17.84■□□□□ 0.45
COL2A1-209ENST00000546974 MYH2Q9UKX2 1941 aa17.84■□□□□ 0.45
COL2A1-209ENST00000546974 TIMM10P62072 90 aa17.83■□□□□ 0.44
COL2A1-209ENST00000546974 ZGPATQ8N5A5 531 aaKnown RBP17.83■□□□□ 0.44
COL2A1-209ENST00000546974 FAM151AQ8WW52 585 aa17.83■□□□□ 0.44
COL2A1-209ENST00000546974 MS4A4AQ96JQ5 239 aa17.83■□□□□ 0.44
COL2A1-209ENST00000546974 PTPN18Q99952 460 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms