RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.99■□□□□ 0.63
SSH1-204ENST00000546697 SSC5DA1L4H1 1573 aa18.98■□□□□ 0.63
SSH1-204ENST00000546697 A0A1B0GUL7 405 aa18.98■□□□□ 0.63
SSH1-204ENST00000546697 F8W031 263 aaPredicted RBP18.98■□□□□ 0.63
SSH1-204ENST00000546697 PHKA1P46020 1223 aa18.98■□□□□ 0.63
SSH1-204ENST00000546697 PDE3AQ14432 1141 aa18.98■□□□□ 0.63
SSH1-204ENST00000546697 MVPQ14764 893 aaKnown RBP18.98■□□□□ 0.63
SSH1-204ENST00000546697 FKBP1CQ5VVH2 108 aa18.98■□□□□ 0.63
SSH1-204ENST00000546697 SLC10A3P09131 477 aa18.97■□□□□ 0.63
SSH1-204ENST00000546697 ADORA1P30542 326 aa18.97■□□□□ 0.63
SSH1-204ENST00000546697 TIMM10P62072 90 aa18.97■□□□□ 0.63
SSH1-204ENST00000546697 LDLRAD1Q5T700 205 aa18.97■□□□□ 0.63
SSH1-204ENST00000546697 CEP85Q6P2H3 762 aa18.97■□□□□ 0.63
SSH1-204ENST00000546697 PANK1Q8TE04 598 aa18.97■□□□□ 0.63
SSH1-204ENST00000546697 ZBTB40Q9NUA8 1239 aa18.97■□□□□ 0.63
SSH1-204ENST00000546697 FRAT2O75474 233 aaPredicted RBP18.96■□□□□ 0.63
SSH1-204ENST00000546697 CHAF1AQ13111 956 aaPredicted RBP18.96■□□□□ 0.63
SSH1-204ENST00000546697 G3BP1Q13283 466 aaKnown RBP eCLIP18.96■□□□□ 0.63
SSH1-204ENST00000546697 TNFAIP1Q13829 316 aa18.96■□□□□ 0.63
SSH1-204ENST00000546697 APOBEC3HQ6NTF7 200 aaKnown RBP18.96■□□□□ 0.63
SSH1-204ENST00000546697 TEKT1Q969V4 418 aa18.96■□□□□ 0.63
SSH1-204ENST00000546697 XAGE2Q96GT9 111 aa18.96■□□□□ 0.63
SSH1-204ENST00000546697 PRDM10Q9NQV6 1147 aa18.96■□□□□ 0.63
SSH1-204ENST00000546697 ZNF70Q9UC06 446 aaPredicted RBP18.96■□□□□ 0.63
SSH1-204ENST00000546697 DDX19BQ9UMR2 479 aa18.96■□□□□ 0.63
SSH1-204ENST00000546697 LAMB1P07942 1786 aa18.96■□□□□ 0.63
SSH1-204ENST00000546697 FOXN1O15353 648 aa18.95■□□□□ 0.62
SSH1-204ENST00000546697 CA12O43570 354 aa18.95■□□□□ 0.62
SSH1-204ENST00000546697 IGSF3O75054 1194 aa18.95■□□□□ 0.62
SSH1-204ENST00000546697 ARID4AP29374 1257 aaPredicted RBP18.95■□□□□ 0.62
SSH1-204ENST00000546697 NF2P35240 595 aa18.95■□□□□ 0.62
SSH1-204ENST00000546697 RASGRF1Q13972 1273 aa18.95■□□□□ 0.62
SSH1-204ENST00000546697 RPAP1Q9BWH6 1393 aaPredicted RBP18.94■□□□□ 0.62
SSH1-204ENST00000546697 FAM83AQ86UY5 434 aa18.94■□□□□ 0.62
SSH1-204ENST00000546697 REM2Q8IYK8 340 aaPredicted RBP18.94■□□□□ 0.62
SSH1-204ENST00000546697 ZGPATQ8N5A5 531 aaKnown RBP18.94■□□□□ 0.62
SSH1-204ENST00000546697 FAM163AQ96GL9 167 aaPredicted RBP18.94■□□□□ 0.62
SSH1-204ENST00000546697 ZNF512BQ96KM6 892 aaPredicted RBP18.94■□□□□ 0.62
SSH1-204ENST00000546697 TEPSINQ96N21 525 aa18.94■□□□□ 0.62
SSH1-204ENST00000546697 SCAF8Q9UPN6 1271 aaKnown RBP18.94■□□□□ 0.62
SSH1-204ENST00000546697 AOC2O75106 756 aa18.93■□□□□ 0.62
SSH1-204ENST00000546697 CTCFP49711 727 aaPredicted RBP18.93■□□□□ 0.62
SSH1-204ENST00000546697 RASA3Q14644 834 aa18.93■□□□□ 0.62
SSH1-204ENST00000546697 SUPT20HL1Q3ZLR7 823 aa18.93■□□□□ 0.62
SSH1-204ENST00000546697 PRAMEF18Q5VWM3 479 aa18.93■□□□□ 0.62
SSH1-204ENST00000546697 RASAL3Q86YV0 1011 aa18.93■□□□□ 0.62
SSH1-204ENST00000546697 RPAP2Q8IXW5 612 aaPredicted RBP18.93■□□□□ 0.62
SSH1-204ENST00000546697 CHMP4BQ9H444 224 aaKnown RBP18.93■□□□□ 0.62
SSH1-204ENST00000546697 TDRD3Q9H7E2 651 aaKnown RBP18.93■□□□□ 0.62
SSH1-204ENST00000546697 CLRN2A0PK11 232 aa18.92■□□□□ 0.62
SSH1-204ENST00000546697 PRDX5P30044 214 aa18.92■□□□□ 0.62
SSH1-204ENST00000546697 ZNF157P51786 506 aaPredicted RBP18.92■□□□□ 0.62
SSH1-204ENST00000546697 C1orf115Q9H7X2 142 aa18.92■□□□□ 0.62
SSH1-204ENST00000546697 GAKO14976 1311 aa18.92■□□□□ 0.62
SSH1-204ENST00000546697 SURF6O75683 361 aaKnown RBP18.91■□□□□ 0.62
SSH1-204ENST00000546697 RBM5P52756 815 aaKnown RBP eCLIP18.91■□□□□ 0.62
SSH1-204ENST00000546697 TNNI3KQ59H18 835 aa18.91■□□□□ 0.62
SSH1-204ENST00000546697 ARMC9Q7Z3E5 817 aa18.91■□□□□ 0.62
SSH1-204ENST00000546697 AIDAQ96BJ3 306 aa18.91■□□□□ 0.62
SSH1-204ENST00000546697 ZIC5Q96T25 663 aa18.91■□□□□ 0.62
SSH1-204ENST00000546697 FPGT-TNNI3KV9GXZ4 949 aa18.91■□□□□ 0.62
SSH1-204ENST00000546697 LDHBP07195 334 aaKnown RBP18.9■□□□□ 0.62
SSH1-204ENST00000546697 HSPA8P11142 646 aaKnown RBP18.9■□□□□ 0.62
SSH1-204ENST00000546697 PAXIP1Q6ZW49 1069 aaPredicted RBP18.9■□□□□ 0.62
SSH1-204ENST00000546697 MOB2Q70IA6 237 aa18.9■□□□□ 0.62
SSH1-204ENST00000546697 SAGE1Q9NXZ1 904 aa18.9■□□□□ 0.62
SSH1-204ENST00000546697 HMG20BQ9P0W2 317 aa18.9■□□□□ 0.62
SSH1-204ENST00000546697 DAGLAQ9Y4D2 1042 aa18.9■□□□□ 0.62
SSH1-204ENST00000546697 RFX7Q2KHR2 1363 aa18.9■□□□□ 0.62
SSH1-204ENST00000546697 UBE2Q2LH0YL09 131 aa18.89■□□□□ 0.61
SSH1-204ENST00000546697 TNNI2P48788 182 aa18.89■□□□□ 0.61
SSH1-204ENST00000546697 NBPF12Q5TAG4 269 aaPredicted RBP18.89■□□□□ 0.61
SSH1-204ENST00000546697 COL13A1Q5TAT6 717 aaPredicted RBP18.89■□□□□ 0.61
SSH1-204ENST00000546697 SIRT2Q8IXJ6 389 aa18.89■□□□□ 0.61
SSH1-204ENST00000546697 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.89■□□□□ 0.61
SSH1-204ENST00000546697 VEZTQ9HBM0 779 aa18.89■□□□□ 0.61
SSH1-204ENST00000546697 COG6Q9Y2V7 657 aa18.89■□□□□ 0.61
SSH1-204ENST00000546697 AKAP11Q9UKA4 1901 aa18.89■□□□□ 0.61
SSH1-204ENST00000546697 PPP1R12BO60237 982 aaPredicted RBP18.88■□□□□ 0.61
SSH1-204ENST00000546697 UQCRFS1P1P0C7P4 283 aa18.88■□□□□ 0.61
SSH1-204ENST00000546697 SPTY2D1Q68D10 685 aaPredicted RBP18.88■□□□□ 0.61
SSH1-204ENST00000546697 ERC1Q8IUD2 1116 aa18.88■□□□□ 0.61
SSH1-204ENST00000546697 USP2O75604 605 aaPredicted RBP18.87■□□□□ 0.61
SSH1-204ENST00000546697 MCAMP43121 646 aa18.87■□□□□ 0.61
SSH1-204ENST00000546697 KIF23Q02241 960 aaPredicted RBP18.87■□□□□ 0.61
SSH1-204ENST00000546697 HSP90AB4PQ58FF6 505 aa18.87■□□□□ 0.61
SSH1-204ENST00000546697 SPATA5Q8NB90 893 aa18.87■□□□□ 0.61
SSH1-204ENST00000546697 ZNF384Q8TF68 577 aa18.87■□□□□ 0.61
SSH1-204ENST00000546697 NEUROD6Q96NK8 337 aa18.87■□□□□ 0.61
SSH1-204ENST00000546697 CSRNP1Q96S65 589 aa18.87■□□□□ 0.61
SSH1-204ENST00000546697 NPM3O75607 178 aaKnown RBP18.86■□□□□ 0.61
SSH1-204ENST00000546697 MAP4K4O95819 1239 aaPredicted RBP18.86■□□□□ 0.61
SSH1-204ENST00000546697 TM4SF4P48230 202 aa18.86■□□□□ 0.61
SSH1-204ENST00000546697 DIXDC1Q155Q3 683 aa18.86■□□□□ 0.61
SSH1-204ENST00000546697 EAF2Q96CJ1 260 aaPredicted RBP18.86■□□□□ 0.61
SSH1-204ENST00000546697 BEGAINQ9BUH8 593 aa18.86■□□□□ 0.61
SSH1-204ENST00000546697 CFHR5Q9BXR6 569 aa18.86■□□□□ 0.61
SSH1-204ENST00000546697 IDI2Q9BXS1 227 aa18.86■□□□□ 0.61
SSH1-204ENST00000546697 DBNLQ9UJU6 430 aaKnown RBP18.86■□□□□ 0.61
SSH1-204ENST00000546697 MYH2Q9UKX2 1941 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms