RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 FERMT3Q86UX7 667 aa9.09□□□□□ -0.95
UBR1-202ENST00000546274 CCAR2Q8N163 923 aaKnown RBP9.09□□□□□ -0.95
UBR1-202ENST00000546274 EDC3Q96F86 508 aaKnown RBP9.09□□□□□ -0.95
UBR1-202ENST00000546274 MRVI1Q9Y6F6 885 aa9.09□□□□□ -0.95
UBR1-202ENST00000546274 CCDC69A6NI79 296 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 PHACTR2O75167 634 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 TAF5LO75529 589 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 CHGBP05060 677 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 G3BP1Q13283 466 aaKnown RBP eCLIP9.08□□□□□ -0.96
UBR1-202ENST00000546274 MCM6Q14566 821 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 ORAI2Q96SN7 254 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 TJP1Q07157 1748 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 NUP188Q5SRE5 1749 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 PSMA5P28066 241 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 PDE6BP35913 854 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 RFX5P48382 616 aaPredicted RBP9.08□□□□□ -0.96
UBR1-202ENST00000546274 RBM5P52756 815 aaKnown RBP eCLIP9.08□□□□□ -0.96
UBR1-202ENST00000546274 LARP1Q6PKG0 1096 aaKnown RBP9.08□□□□□ -0.96
UBR1-202ENST00000546274 JMYQ8N9B5 988 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 IQUBQ8NA54 791 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 FSD1Q9BTV5 496 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 ZNF609O15014 1411 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 PKD1L3Q7Z443 1732 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 NPHP3Q7Z494 1330 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 URI1O94763 535 aaPredicted RBP9.08□□□□□ -0.96
UBR1-202ENST00000546274 HNRNPH1P31943 449 aaKnown RBP9.08□□□□□ -0.96
UBR1-202ENST00000546274 KRT85P78386 507 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 GCKRQ14397 625 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 BLOC1S2Q6QNY1 142 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 RBM43Q6ZSC3 357 aaKnown RBP9.08□□□□□ -0.96
UBR1-202ENST00000546274 EFCAB13Q8IY85 973 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 KAT2BQ92831 832 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 BORCS6Q96GS4 357 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 CARD6Q9BX69 1037 aa9.08□□□□□ -0.96
UBR1-202ENST00000546274 SPATA31A6Q5VVP1 1343 aa9.07□□□□□ -0.96
UBR1-202ENST00000546274 ERLIN2O94905 339 aa9.07□□□□□ -0.96
UBR1-202ENST00000546274 MAP3K11Q16584 847 aa9.07□□□□□ -0.96
UBR1-202ENST00000546274 CC2D1AQ6P1N0 951 aaPredicted RBP9.07□□□□□ -0.96
UBR1-202ENST00000546274 ARFGAP3Q9NP61 516 aa9.07□□□□□ -0.96
UBR1-202ENST00000546274 DBNLQ9UJU6 430 aaKnown RBP9.07□□□□□ -0.96
UBR1-202ENST00000546274 COL22A1Q8NFW1 1626 aaPredicted RBP9.07□□□□□ -0.96
UBR1-202ENST00000546274 DDX58O95786 925 aaKnown RBP9.07□□□□□ -0.96
UBR1-202ENST00000546274 SLC39A6Q13433 755 aa9.07□□□□□ -0.96
UBR1-202ENST00000546274 ZNF790Q6PG37 636 aa9.07□□□□□ -0.96
UBR1-202ENST00000546274 CPLX2Q6PUV4 134 aaKnown RBP9.07□□□□□ -0.96
UBR1-202ENST00000546274 PLA2G4DQ86XP0 818 aa9.07□□□□□ -0.96
UBR1-202ENST00000546274 PIK3R5Q8WYR1 880 aa9.07□□□□□ -0.96
UBR1-202ENST00000546274 IRAK4Q9NWZ3 460 aa9.07□□□□□ -0.96
UBR1-202ENST00000546274 DNAI1Q9UI46 699 aa9.07□□□□□ -0.96
UBR1-202ENST00000546274 DDX60Q8IY21 1712 aaKnown RBP9.07□□□□□ -0.96
UBR1-202ENST00000546274 ZNF165P49910 485 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 EVCP57679 992 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 TRDNQ13061 729 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 ANKRD1Q15327 319 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 NBPF9Q3BBW0 867 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 UBXN6Q9BZV1 441 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 DNAJC25Q9H1X3 360 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 PSD3Q9NYI0 1048 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 NDUFB9Q9Y6M9 179 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 MEGF6O75095 1541 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 FRMD3A2A2Y4 597 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 CAND2O75155 1236 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 FAM177A1Q8N128 213 aaPredicted RBP9.06□□□□□ -0.96
UBR1-202ENST00000546274 LEO1Q8WVC0 666 aaPredicted RBP9.06□□□□□ -0.96
UBR1-202ENST00000546274 MIEF2Q96C03 454 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 PGBD1Q96JS3 809 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 NUP62CLQ9H1M0 184 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 L2HGDHQ9H9P8 463 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 PDE11AQ9HCR9 933 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 COPRSQ9NQ92 184 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 HMG20BQ9P0W2 317 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 JAK2O60674 1132 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 MYL6BP14649 208 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 ATP5JP18859 108 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 PDCP20941 246 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 ATP2B2Q01814 1243 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 PTPN12Q05209 780 aaKnown RBP9.06□□□□□ -0.96
UBR1-202ENST00000546274 STK3Q13188 491 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 RIC3Q7Z5B4 369 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 XAGE3Q8WTP9 111 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 N4BP2L2Q92802 583 aaPredicted RBP9.06□□□□□ -0.96
UBR1-202ENST00000546274 METTL22Q9BUU2 404 aaPredicted RBP9.06□□□□□ -0.96
UBR1-202ENST00000546274 SLC52A2Q9HAB3 445 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 DACT1Q9NYF0 836 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 ABCC6O95255 1503 aa9.06□□□□□ -0.96
UBR1-202ENST00000546274 SOS2Q07890 1332 aaPredicted RBP9.05□□□□□ -0.96
UBR1-202ENST00000546274 A0A087WUV0 522 aaPredicted RBP9.05□□□□□ -0.96
UBR1-202ENST00000546274 CLSTN1O94985 981 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 TNNI3KQ59H18 835 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 NBPF10Q6P3W6 841 aaKnown RBP9.05□□□□□ -0.96
UBR1-202ENST00000546274 FAXDC2Q96IV6 333 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 MYD88Q99836 296 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 TNMDQ9H2S6 317 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 TFIP11Q9UBB9 837 aaKnown RBP9.05□□□□□ -0.96
UBR1-202ENST00000546274 FPGT-TNNI3KV9GXZ4 949 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 RFX7Q2KHR2 1363 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 PARP4Q9UKK3 1724 aaKnown RBP9.05□□□□□ -0.96
UBR1-202ENST00000546274 NWD2Q9ULI1 1742 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 GOLGA6L19H0YKK7 550 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 N4BP1O75113 896 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms