RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 MYBBP1AQ9BQG0 1328 aaKnown RBP12.05□□□□□ -0.48
CHD4-212ENST00000545083 SPDYE5A6NIY4 337 aa12.04□□□□□ -0.48
CHD4-212ENST00000545083 TCP10L2B9ZVM9 353 aa12.04□□□□□ -0.48
CHD4-212ENST00000545083 BTBD19C9JJ37 291 aa12.04□□□□□ -0.48
CHD4-212ENST00000545083 SOX1O00570 391 aaPredicted RBP12.04□□□□□ -0.48
CHD4-212ENST00000545083 APAF1O14727 1248 aa12.04□□□□□ -0.48
CHD4-212ENST00000545083 TNFAIP1Q13829 316 aa12.04□□□□□ -0.48
CHD4-212ENST00000545083 SNCAIPQ9Y6H5 919 aa12.04□□□□□ -0.48
CHD4-212ENST00000545083 FAM205AQ6ZU69 1335 aa12.04□□□□□ -0.48
CHD4-212ENST00000545083 A0A1B0GUL6 1792 aa12.03□□□□□ -0.48
CHD4-212ENST00000545083 ANKRD18BA2A2Z9 1011 aa12.03□□□□□ -0.48
CHD4-212ENST00000545083 IRF6O14896 467 aa12.03□□□□□ -0.48
CHD4-212ENST00000545083 KIF22Q14807 665 aa12.03□□□□□ -0.48
CHD4-212ENST00000545083 DZIP1LQ8IYY4 767 aaKnown RBP12.03□□□□□ -0.48
CHD4-212ENST00000545083 TRIM47Q96LD4 638 aa12.03□□□□□ -0.48
CHD4-212ENST00000545083 TTF2Q9UNY4 1162 aaKnown RBP12.03□□□□□ -0.48
CHD4-212ENST00000545083 CSADQ9Y600 493 aa12.03□□□□□ -0.48
CHD4-212ENST00000545083 GNRH1P01148 92 aa12.02□□□□□ -0.49
CHD4-212ENST00000545083 CETPP11597 493 aa12.02□□□□□ -0.49
CHD4-212ENST00000545083 GJA8P48165 433 aa12.02□□□□□ -0.49
CHD4-212ENST00000545083 GRIK5Q16478 980 aa12.02□□□□□ -0.49
CHD4-212ENST00000545083 MFSD14BQ5SR56 506 aa12.02□□□□□ -0.49
CHD4-212ENST00000545083 C17orf99Q6UX52 265 aa12.02□□□□□ -0.49
CHD4-212ENST00000545083 ZKSCAN4Q969J2 545 aaPredicted RBP12.02□□□□□ -0.49
CHD4-212ENST00000545083 LRCH3Q96II8 777 aa12.02□□□□□ -0.49
CHD4-212ENST00000545083 SRRDQ9UH36 339 aa12.02□□□□□ -0.49
CHD4-212ENST00000545083 CPA4Q9UI42 421 aa12.02□□□□□ -0.49
CHD4-212ENST00000545083 SERPINA10Q9UK55 444 aa12.02□□□□□ -0.49
CHD4-212ENST00000545083 ARAP2Q8WZ64 1704 aa12.01□□□□□ -0.49
CHD4-212ENST00000545083 ZBTB7BO15156 539 aaPredicted RBP12.01□□□□□ -0.49
CHD4-212ENST00000545083 PLIN1O60240 522 aa12.01□□□□□ -0.49
CHD4-212ENST00000545083 GJB1P08034 283 aa12.01□□□□□ -0.49
CHD4-212ENST00000545083 CCL5P13501 91 aa12.01□□□□□ -0.49
CHD4-212ENST00000545083 OSBPP22059 807 aa12.01□□□□□ -0.49
CHD4-212ENST00000545083 GRK4P32298 578 aa12.01□□□□□ -0.49
CHD4-212ENST00000545083 PSMC4P43686 418 aa12.01□□□□□ -0.49
CHD4-212ENST00000545083 CRKP46108 304 aa12.01□□□□□ -0.49
CHD4-212ENST00000545083 CACNB3P54284 484 aa12.01□□□□□ -0.49
CHD4-212ENST00000545083 PRMT2P55345 433 aa12.01□□□□□ -0.49
CHD4-212ENST00000545083 FOXO4P98177 505 aa12.01□□□□□ -0.49
CHD4-212ENST00000545083 CALD1Q05682 793 aaKnown RBP12.01□□□□□ -0.49
CHD4-212ENST00000545083 TDRD7Q8NHU6 1098 aaKnown RBP12.01□□□□□ -0.49
CHD4-212ENST00000545083 TSR2Q969E8 191 aaKnown RBP12.01□□□□□ -0.49
CHD4-212ENST00000545083 ZNF594Q96JF6 807 aaPredicted RBP12.01□□□□□ -0.49
CHD4-212ENST00000545083 HTATIP2Q9BUP3 242 aa12.01□□□□□ -0.49
CHD4-212ENST00000545083 STK31Q9BXU1 1019 aa12.01□□□□□ -0.49
CHD4-212ENST00000545083 ZCCHC17Q9NP64 241 aaKnown RBP12.01□□□□□ -0.49
CHD4-212ENST00000545083 RIPOR2Q9Y4F9 1068 aa12.01□□□□□ -0.49
CHD4-212ENST00000545083 WDHD1O75717 1129 aaPredicted RBP12□□□□□ -0.49
CHD4-212ENST00000545083 SLC4A2P04920 1241 aa12□□□□□ -0.49
CHD4-212ENST00000545083 GYG1P46976 350 aa12□□□□□ -0.49
CHD4-212ENST00000545083 IFIT5Q13325 482 aaKnown RBP12□□□□□ -0.49
CHD4-212ENST00000545083 SNAPC2Q13487 334 aa12□□□□□ -0.49
CHD4-212ENST00000545083 EPHA10Q5JZY3 1008 aa12□□□□□ -0.49
CHD4-212ENST00000545083 ERO1BQ86YB8 467 aa12□□□□□ -0.49
CHD4-212ENST00000545083 NKX2-3Q8TAU0 364 aa12□□□□□ -0.49
CHD4-212ENST00000545083 WRNIP1Q96S55 665 aa12□□□□□ -0.49
CHD4-212ENST00000545083 CHMP4AQ9BY43 222 aa12□□□□□ -0.49
CHD4-212ENST00000545083 ADGRA2Q96PE1 1338 aa12□□□□□ -0.49
CHD4-212ENST00000545083 TNNI2P48788 182 aa11.99□□□□□ -0.49
CHD4-212ENST00000545083 FLIIQ13045 1269 aa11.99□□□□□ -0.49
CHD4-212ENST00000545083 PPIL2Q13356 520 aa11.99□□□□□ -0.49
CHD4-212ENST00000545083 LINS1Q8NG48 757 aa11.99□□□□□ -0.49
CHD4-212ENST00000545083 RAET1EQ8TD07 263 aa11.99□□□□□ -0.49
CHD4-212ENST00000545083 U2AF1L4Q8WU68 220 aaKnown RBP11.99□□□□□ -0.49
CHD4-212ENST00000545083 DNAAF4Q8WXU2 420 aa11.99□□□□□ -0.49
CHD4-212ENST00000545083 FAM84BQ96KN1 310 aaPredicted RBP11.99□□□□□ -0.49
CHD4-212ENST00000545083 RNF208Q9H0X6 261 aa11.99□□□□□ -0.49
CHD4-212ENST00000545083 MYH16Q9H6N6 1097 aa11.99□□□□□ -0.49
CHD4-212ENST00000545083 CHMP3Q9Y3E7 222 aa11.99□□□□□ -0.49
CHD4-212ENST00000545083 NR2E3Q9Y5X4 410 aa11.99□□□□□ -0.49
CHD4-212ENST00000545083 MYPNQ86TC9 1320 aa11.98□□□□□ -0.49
CHD4-212ENST00000545083 FARP2O94887 1054 aaPredicted RBP11.98□□□□□ -0.49
CHD4-212ENST00000545083 FMNL1O95466 1100 aaPredicted RBP11.98□□□□□ -0.49
CHD4-212ENST00000545083 PRKCZQ05513 592 aa11.98□□□□□ -0.49
CHD4-212ENST00000545083 MOGSQ13724 837 aa11.98□□□□□ -0.49
CHD4-212ENST00000545083 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
CHD4-212ENST00000545083 UNC93B1Q9H1C4 597 aa11.98□□□□□ -0.49
CHD4-212ENST00000545083 A0A1W2PPC1 479 aa11.97□□□□□ -0.49
CHD4-212ENST00000545083 PDHXO00330 501 aa11.97□□□□□ -0.49
CHD4-212ENST00000545083 HOXD10P28358 340 aa11.97□□□□□ -0.49
CHD4-212ENST00000545083 HIBADHP31937 336 aaKnown RBP11.97□□□□□ -0.49
CHD4-212ENST00000545083 INPP5BP32019 993 aa11.97□□□□□ -0.49
CHD4-212ENST00000545083 FKBP5Q13451 457 aaPredicted RBP11.97□□□□□ -0.49
CHD4-212ENST00000545083 TWISTNBQ3B726 338 aaPredicted RBP11.97□□□□□ -0.49
CHD4-212ENST00000545083 LMBR1LQ6UX01 489 aa11.97□□□□□ -0.49
CHD4-212ENST00000545083 LDHAL6AQ6ZMR3 332 aa11.97□□□□□ -0.49
CHD4-212ENST00000545083 ANKRD23Q86SG2 305 aa11.97□□□□□ -0.49
CHD4-212ENST00000545083 CNNM1Q9NRU3 951 aa11.97□□□□□ -0.49
CHD4-212ENST00000545083 BIN2Q9UBW5 565 aaPredicted RBP11.97□□□□□ -0.49
CHD4-212ENST00000545083 STAP2Q9UGK3 403 aa11.97□□□□□ -0.49
CHD4-212ENST00000545083 IQSEC3Q9UPP2 1182 aaPredicted RBP11.97□□□□□ -0.49
CHD4-212ENST00000545083 MNX1P50219 401 aaPredicted RBP11.96□□□□□ -0.49
CHD4-212ENST00000545083 PPATQ06203 517 aa11.96□□□□□ -0.49
CHD4-212ENST00000545083 PUS3Q9BZE2 481 aaKnown RBP11.96□□□□□ -0.49
CHD4-212ENST00000545083 GABRQQ9UN88 632 aa11.96□□□□□ -0.49
CHD4-212ENST00000545083 F6X3S4 739 aa11.95□□□□□ -0.5
CHD4-212ENST00000545083 EVI5O60447 810 aa11.95□□□□□ -0.5
CHD4-212ENST00000545083 SGPL1O95470 568 aa11.95□□□□□ -0.5
CHD4-212ENST00000545083 BCRP11274 1271 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms