RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 PHRF1Q9P1Y6 1649 aaKnown RBP10.25□□□□□ -0.77
NECAP1-207ENST00000544891 FSD2A1L4K1 749 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 DYNC1I1O14576 645 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 STAT6P42226 847 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 FAM193AP78312 1265 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 KRT83P78385 493 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 TTC6Q86TZ1 520 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 C8orf58Q8NAV2 365 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 SH2D4AQ9H788 454 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 CALCOCO1Q9P1Z2 691 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 CEP85Q6P2H3 762 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 PLCD4Q9BRC7 762 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 SELENOOQ9BVL4 669 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 PEAK1Q9H792 1746 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 POLR3GO15318 223 aaPredicted RBP10.25□□□□□ -0.77
NECAP1-207ENST00000544891 ATP6V1AP38606 617 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 UBASH3AP57075 661 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 HAND2P61296 217 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 KRT79Q5XKE5 535 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 SPECC1LQ69YQ0 1117 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.25□□□□□ -0.77
NECAP1-207ENST00000544891 ZC3H12CQ9C0D7 883 aaKnown RBP10.25□□□□□ -0.77
NECAP1-207ENST00000544891 BCL11BQ9C0K0 894 aaPredicted RBP10.25□□□□□ -0.77
NECAP1-207ENST00000544891 PRR36Q9H6K5 1346 aa10.25□□□□□ -0.77
NECAP1-207ENST00000544891 MAGEB6P1A0A0J9YX57 407 aa10.24□□□□□ -0.77
NECAP1-207ENST00000544891 SPTLC2O15270 562 aa10.24□□□□□ -0.77
NECAP1-207ENST00000544891 PRC1O43663 620 aa10.24□□□□□ -0.77
NECAP1-207ENST00000544891 GCP02774 474 aa10.24□□□□□ -0.77
NECAP1-207ENST00000544891 CCDC175P0C221 793 aa10.24□□□□□ -0.77
NECAP1-207ENST00000544891 MTHFSDQ2M296 383 aaKnown RBP10.24□□□□□ -0.77
NECAP1-207ENST00000544891 NIP7Q9Y221 180 aaKnown RBP eCLIP10.24□□□□□ -0.77
NECAP1-207ENST00000544891 TTLL12Q14166 644 aaPredicted RBP10.24□□□□□ -0.77
NECAP1-207ENST00000544891 LLPHQ9BRT6 129 aaKnown RBP10.24□□□□□ -0.77
NECAP1-207ENST00000544891 DZIP3Q86Y13 1208 aaKnown RBP10.24□□□□□ -0.77
NECAP1-207ENST00000544891 DENND2AQ9ULE3 1009 aa10.24□□□□□ -0.77
NECAP1-207ENST00000544891 VIRMAQ69YN4 1812 aaKnown RBP10.24□□□□□ -0.77
NECAP1-207ENST00000544891 CHRNA2Q15822 529 aa10.24□□□□□ -0.77
NECAP1-207ENST00000544891 TMEM87BQ96K49 555 aa10.24□□□□□ -0.77
NECAP1-207ENST00000544891 RTCBQ9Y3I0 505 aaKnown RBP10.24□□□□□ -0.77
NECAP1-207ENST00000544891 TMCO5BA8MYB1 307 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 TACC1O75410 805 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 RRAGBQ5VZM2 374 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 HS2ST1Q7LGA3 356 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 NOP2P46087 812 aaKnown RBP10.23□□□□□ -0.77
NECAP1-207ENST00000544891 KIAA0753Q2KHM9 967 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 MPNDQ8N594 471 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 RRP36Q96EU6 259 aaKnown RBP10.23□□□□□ -0.77
NECAP1-207ENST00000544891 CCDC77Q9BR77 488 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 IMPG2Q9BZV3 1241 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 GNG11P61952 73 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 HLTFQ14527 1009 aaKnown RBP eCLIP10.23□□□□□ -0.77
NECAP1-207ENST00000544891 ZSCAN23Q3MJ62 389 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 WDR78Q5VTH9 848 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 Q6ZUG5 572 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 IQUBQ8NA54 791 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 MSANTD4Q8NCY6 345 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 STMN4Q9H169 189 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-207ENST00000544891 TRIM35Q9UPQ4 493 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 MAST3O60307 1309 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 RNMTO43148 476 aaKnown RBP10.23□□□□□ -0.77
NECAP1-207ENST00000544891 CCDC155Q8N6L0 562 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 SREK1Q8WXA9 508 aaKnown RBP10.23□□□□□ -0.77
NECAP1-207ENST00000544891 ZNF622Q969S3 477 aaKnown RBP eCLIP10.23□□□□□ -0.77
NECAP1-207ENST00000544891 SAMM50Q9Y512 469 aa10.23□□□□□ -0.77
NECAP1-207ENST00000544891 MARF1Q9Y4F3 1742 aaKnown RBP10.22□□□□□ -0.77
NECAP1-207ENST00000544891 NF2P35240 595 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 NAPAP54920 295 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 PLBD2Q8NHP8 589 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 RASAL2Q9UJF2 1139 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 ABCC6O95255 1503 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 LRRC37A3O60309 1634 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 IRS4O14654 1257 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-207ENST00000544891 APBB1IPQ7Z5R6 666 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-207ENST00000544891 CEP112Q8N8E3 955 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 CPLX3Q8WVH0 158 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 EYA1Q99502 592 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 VAT1LQ9HCJ6 419 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 SPDYE3A6NKU9 549 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 KRT86O43790 486 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 RILPL1Q5EBL4 403 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 CEP135Q66GS9 1140 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 SMARCC2Q8TAQ2 1214 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 CTNNBL1Q8WYA6 563 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-207ENST00000544891 BIN1O00499 593 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 RPL13P26373 211 aaKnown RBP10.22□□□□□ -0.77
NECAP1-207ENST00000544891 KRT2P35908 639 aa10.22□□□□□ -0.77
NECAP1-207ENST00000544891 CTAGE15A4D2H0 777 aa10.21□□□□□ -0.77
NECAP1-207ENST00000544891 CTAGE8P0CG41 777 aa10.21□□□□□ -0.77
NECAP1-207ENST00000544891 HOXC9P31274 260 aa10.21□□□□□ -0.77
NECAP1-207ENST00000544891 NMIQ13287 307 aaPredicted RBP10.21□□□□□ -0.77
NECAP1-207ENST00000544891 TUBB2AQ13885 445 aa10.21□□□□□ -0.77
NECAP1-207ENST00000544891 CREB3L3Q68CJ9 461 aa10.21□□□□□ -0.77
NECAP1-207ENST00000544891 CTAGE6Q86UF2 777 aa10.21□□□□□ -0.77
NECAP1-207ENST00000544891 CTAGE4Q8IX94 777 aa10.21□□□□□ -0.77
NECAP1-207ENST00000544891 TUBB2BQ9BVA1 445 aa10.21□□□□□ -0.77
NECAP1-207ENST00000544891 EYA2O00167 538 aa10.21□□□□□ -0.77
NECAP1-207ENST00000544891 ATP2A1O14983 1001 aa10.21□□□□□ -0.77
NECAP1-207ENST00000544891 HCLS1P14317 486 aaPredicted RBP10.21□□□□□ -0.77
NECAP1-207ENST00000544891 TNNI2P48788 182 aa10.21□□□□□ -0.77
NECAP1-207ENST00000544891 NCBP1Q09161 790 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms