RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 MOB2Q70IA6 237 aa8.23□□□□□ -1.09
CDCA3-209ENST00000544610 OGFOD1Q8N543 542 aa8.23□□□□□ -1.09
CDCA3-209ENST00000544610 PI4KAP1Q8N8J0 262 aa8.23□□□□□ -1.09
CDCA3-209ENST00000544610 COA1Q9GZY4 146 aa8.23□□□□□ -1.09
CDCA3-209ENST00000544610 SCAF8Q9UPN6 1271 aaKnown RBP8.23□□□□□ -1.09
CDCA3-209ENST00000544610 AKAP11Q9UKA4 1901 aa8.23□□□□□ -1.09
CDCA3-209ENST00000544610 POLR2AP24928 1970 aaKnown RBP8.22□□□□□ -1.09
CDCA3-209ENST00000544610 SPEF2Q9C093 1822 aa8.22□□□□□ -1.09
CDCA3-209ENST00000544610 COL1A1P02452 1464 aaPredicted RBP8.22□□□□□ -1.09
CDCA3-209ENST00000544610 NEURL1BA8MQ27 555 aa8.22□□□□□ -1.09
CDCA3-209ENST00000544610 UBE2Q2LH0YL09 131 aa8.22□□□□□ -1.09
CDCA3-209ENST00000544610 MMP14P50281 582 aa8.22□□□□□ -1.09
CDCA3-209ENST00000544610 NEXNQ0ZGT2 675 aa8.22□□□□□ -1.09
CDCA3-209ENST00000544610 PDAP1Q13442 181 aaKnown RBP8.22□□□□□ -1.09
CDCA3-209ENST00000544610 CWF19L2Q2TBE0 894 aaKnown RBP8.22□□□□□ -1.09
CDCA3-209ENST00000544610 NOM1Q5C9Z4 860 aaKnown RBP8.22□□□□□ -1.09
CDCA3-209ENST00000544610 PRAMEF18Q5VWM3 479 aa8.22□□□□□ -1.09
CDCA3-209ENST00000544610 TXNRD3Q86VQ6 643 aa8.22□□□□□ -1.09
CDCA3-209ENST00000544610 FRAT1Q92837 279 aaPredicted RBP8.22□□□□□ -1.09
CDCA3-209ENST00000544610 KIF12Q96FN5 646 aa8.22□□□□□ -1.09
CDCA3-209ENST00000544610 MXD3Q9BW11 206 aa8.22□□□□□ -1.09
CDCA3-209ENST00000544610 PLA2G12BQ9BX93 195 aa8.22□□□□□ -1.09
CDCA3-209ENST00000544610 SLC24A3Q9HC58 644 aa8.22□□□□□ -1.09
CDCA3-209ENST00000544610 HPS5Q9UPZ3 1129 aa8.22□□□□□ -1.09
CDCA3-209ENST00000544610 LEMD3Q9Y2U8 911 aa8.22□□□□□ -1.09
CDCA3-209ENST00000544610 MYH3P11055 1940 aa8.21□□□□□ -1.09
CDCA3-209ENST00000544610 H7C1W4 665 aa8.21□□□□□ -1.1
CDCA3-209ENST00000544610 ALDH1L1O75891 902 aa8.21□□□□□ -1.1
CDCA3-209ENST00000544610 SASH1O94885 1247 aa8.21□□□□□ -1.1
CDCA3-209ENST00000544610 KLRK1P26718 216 aa8.21□□□□□ -1.1
CDCA3-209ENST00000544610 NF2P35240 595 aa8.21□□□□□ -1.1
CDCA3-209ENST00000544610 IGHMBP2P38935 993 aaKnown RBP8.21□□□□□ -1.1
CDCA3-209ENST00000544610 TM4SF4P48230 202 aa8.21□□□□□ -1.1
CDCA3-209ENST00000544610 EMP3P54852 163 aa8.21□□□□□ -1.1
CDCA3-209ENST00000544610 PKN2Q16513 984 aaKnown RBP8.21□□□□□ -1.1
CDCA3-209ENST00000544610 UBE3BQ7Z3V4 1068 aa8.21□□□□□ -1.1
CDCA3-209ENST00000544610 APOBEC3FQ8IUX4 373 aaKnown RBP8.21□□□□□ -1.1
CDCA3-209ENST00000544610 ZNF296Q8WUU4 475 aaPredicted RBP8.21□□□□□ -1.1
CDCA3-209ENST00000544610 FBXW7Q969H0 707 aa8.21□□□□□ -1.1
CDCA3-209ENST00000544610 CFHR5Q9BXR6 569 aa8.21□□□□□ -1.1
CDCA3-209ENST00000544610 ZBTB40Q9NUA8 1239 aa8.21□□□□□ -1.1
CDCA3-209ENST00000544610 HTTP42858 3142 aa8.21□□□□□ -1.1
CDCA3-209ENST00000544610 ZNF804BA4D1E1 1349 aa8.21□□□□□ -1.1
CDCA3-209ENST00000544610 ZBTB7BO15156 539 aaPredicted RBP8.2□□□□□ -1.1
CDCA3-209ENST00000544610 PLIN1O60240 522 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 TBC1D8O95759 1140 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 CSF1RP07333 972 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 GNAI3P08754 354 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 RLBP1P12271 317 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 ITGA6P23229 1130 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 CASP7P55210 303 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 SREBF2Q12772 1141 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 FKBP5Q13451 457 aaPredicted RBP8.2□□□□□ -1.1
CDCA3-209ENST00000544610 TTLL12Q14166 644 aaPredicted RBP8.2□□□□□ -1.1
CDCA3-209ENST00000544610 GCKRQ14397 625 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 E2F4Q16254 413 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 TTLL5Q6EMB2 1281 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 G2E3Q7L622 706 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 LINS1Q8NG48 757 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 DNAAF4Q8WXU2 420 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 CLUAP1Q96AJ1 413 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 ZBED3Q96IU2 234 aaPredicted RBP8.2□□□□□ -1.1
CDCA3-209ENST00000544610 ANKRD2Q9GZV1 360 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 HDAC9Q9UKV0 1011 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 TRPC6Q9Y210 931 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 IRS2Q9Y4H2 1338 aa8.2□□□□□ -1.1
CDCA3-209ENST00000544610 GPR25O00155 361 aa8.19□□□□□ -1.1
CDCA3-209ENST00000544610 PTPN12Q05209 780 aaKnown RBP8.19□□□□□ -1.1
CDCA3-209ENST00000544610 LDLRAD1Q5T700 205 aa8.19□□□□□ -1.1
CDCA3-209ENST00000544610 KIAA0825Q8IV33 1275 aa8.19□□□□□ -1.1
CDCA3-209ENST00000544610 MPHOSPH8Q99549 860 aa8.19□□□□□ -1.1
CDCA3-209ENST00000544610 BRCA2P51587 3418 aa8.19□□□□□ -1.1
CDCA3-209ENST00000544610 UTYO14607 1347 aa8.19□□□□□ -1.1
CDCA3-209ENST00000544610 SSC5DA1L4H1 1573 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 A0A1B0GUL6 1792 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 LAMB1P07942 1786 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 TTLL13PA6NNM8 815 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 SEMA3EO15041 775 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 GTF2IP78347 998 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 CHRNDQ07001 517 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 MKRN3Q13064 507 aaKnown RBP8.18□□□□□ -1.1
CDCA3-209ENST00000544610 HDAC1Q13547 482 aaPredicted RBP8.18□□□□□ -1.1
CDCA3-209ENST00000544610 MAP3K11Q16584 847 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 BEND3Q5T5X7 828 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 C20orf194Q5TEA3 1177 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 PRPF38BQ5VTL8 546 aaKnown RBP8.18□□□□□ -1.1
CDCA3-209ENST00000544610 SPRYD7Q5W111 196 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 FBXO46Q6PJ61 603 aaPredicted RBP8.18□□□□□ -1.1
CDCA3-209ENST00000544610 C15orf52Q6ZUT6 534 aaKnown RBP8.18□□□□□ -1.1
CDCA3-209ENST00000544610 ARMC9Q7Z3E5 817 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 RPAP2Q8IXW5 612 aaPredicted RBP8.18□□□□□ -1.1
CDCA3-209ENST00000544610 TMEM57Q8N5G2 664 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 MTMR14Q8NCE2 650 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 PANK1Q8TE04 598 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 CRBNQ96SW2 442 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 MFRPQ9BY79 579 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 SRCIN1Q9C0H9 1055 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 TSPYL2Q9H2G4 693 aaPredicted RBP8.18□□□□□ -1.1
CDCA3-209ENST00000544610 CD209Q9NNX6 404 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 COG6Q9Y2V7 657 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms