RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 DZIP1Q86YF9 867 aaKnown RBP17.61■□□□□ 0.41
TNFRSF1A-216ENST00000543995 ANTXR1Q9H6X2 564 aa17.61■□□□□ 0.41
TNFRSF1A-216ENST00000543995 PAG1Q9NWQ8 432 aa17.61■□□□□ 0.41
TNFRSF1A-216ENST00000543995 MAST3O60307 1309 aa17.6■□□□□ 0.41
TNFRSF1A-216ENST00000543995 MAP4K4O95819 1239 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF1A-216ENST00000543995 EPHX2P34913 555 aa17.6■□□□□ 0.41
TNFRSF1A-216ENST00000543995 RBM5P52756 815 aaKnown RBP eCLIP17.6■□□□□ 0.41
TNFRSF1A-216ENST00000543995 RBM26Q5T8P6 1007 aaKnown RBP17.6■□□□□ 0.41
TNFRSF1A-216ENST00000543995 PIH1D3Q9NQM4 214 aaKnown RBP17.6■□□□□ 0.41
TNFRSF1A-216ENST00000543995 AOX1Q06278 1338 aa17.59■□□□□ 0.41
TNFRSF1A-216ENST00000543995 POTECB2RU33 542 aa17.59■□□□□ 0.41
TNFRSF1A-216ENST00000543995 IDH1O75874 414 aaKnown RBP17.59■□□□□ 0.41
TNFRSF1A-216ENST00000543995 MMP14P50281 582 aa17.59■□□□□ 0.41
TNFRSF1A-216ENST00000543995 SAMD7Q7Z3H4 446 aa17.59■□□□□ 0.41
TNFRSF1A-216ENST00000543995 EDC3Q96F86 508 aaKnown RBP17.59■□□□□ 0.41
TNFRSF1A-216ENST00000543995 MYOZ2Q9NPC6 264 aa17.59■□□□□ 0.41
TNFRSF1A-216ENST00000543995 ADARB2Q9NS39 739 aaKnown RBP17.59■□□□□ 0.41
TNFRSF1A-216ENST00000543995 DOCK2Q92608 1830 aa17.59■□□□□ 0.41
TNFRSF1A-216ENST00000543995 ZNF280AP59817 542 aaPredicted RBP17.58■□□□□ 0.41
TNFRSF1A-216ENST00000543995 TBC1D10BQ4KMP7 808 aaPredicted RBP17.58■□□□□ 0.41
TNFRSF1A-216ENST00000543995 ZNF784Q8NCA9 323 aaPredicted RBP17.58■□□□□ 0.41
TNFRSF1A-216ENST00000543995 OSBPL3Q9H4L5 887 aa17.58■□□□□ 0.41
TNFRSF1A-216ENST00000543995 TAF1DQ9H5J8 278 aaPredicted RBP17.58■□□□□ 0.41
TNFRSF1A-216ENST00000543995 GTF3C3Q9Y5Q9 886 aa17.58■□□□□ 0.41
TNFRSF1A-216ENST00000543995 MYH2Q9UKX2 1941 aa17.58■□□□□ 0.41
TNFRSF1A-216ENST00000543995 MECOMQ03112 1051 aa17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 MAP3K12Q12852 859 aa17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 KIF4BQ2VIQ3 1234 aa17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 EAPPQ56P03 285 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 TEKT1Q969V4 418 aa17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 SERPINA10Q9UK55 444 aa17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 MAST2Q6P0Q8 1798 aa17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 ADAMTSL1Q8N6G6 1762 aa17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 CRKP46108 304 aa17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 DLGAP5Q15398 846 aa17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 DIXDC1Q155Q3 683 aa17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 CFAP100Q494V2 611 aa17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 PNMA8AQ86V59 439 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 SKAP1Q86WV1 359 aa17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 SLF2Q8IX21 1173 aa17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 TRPM4Q8TD43 1214 aa17.57■□□□□ 0.4
TNFRSF1A-216ENST00000543995 MYH7P12883 1935 aa17.56■□□□□ 0.4
TNFRSF1A-216ENST00000543995 TRIM6-TRIM34B2RNG4 842 aa17.56■□□□□ 0.4
TNFRSF1A-216ENST00000543995 RGS3P49796 1198 aa17.56■□□□□ 0.4
TNFRSF1A-216ENST00000543995 GSTO1P78417 241 aa17.56■□□□□ 0.4
TNFRSF1A-216ENST00000543995 HDLBPQ00341 1268 aaKnown RBP17.56■□□□□ 0.4
TNFRSF1A-216ENST00000543995 NAA16Q6N069 864 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF1A-216ENST00000543995 USP50Q70EL3 339 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF1A-216ENST00000543995 NSUN4Q96CB9 384 aaKnown RBP17.56■□□□□ 0.4
TNFRSF1A-216ENST00000543995 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.56■□□□□ 0.4
TNFRSF1A-216ENST00000543995 EGFRP00533 1210 aa17.55■□□□□ 0.4
TNFRSF1A-216ENST00000543995 MAGEB6Q8N7X4 407 aa17.55■□□□□ 0.4
TNFRSF1A-216ENST00000543995 MRIQ9BWK5 157 aa17.55■□□□□ 0.4
TNFRSF1A-216ENST00000543995 AK9Q5TCS8 1911 aa17.55■□□□□ 0.4
TNFRSF1A-216ENST00000543995 LDHCP07864 332 aa17.54■□□□□ 0.4
TNFRSF1A-216ENST00000543995 HHIPL2Q6UWX4 724 aa17.54■□□□□ 0.4
TNFRSF1A-216ENST00000543995 KBTBD3Q8NAB2 608 aa17.54■□□□□ 0.4
TNFRSF1A-216ENST00000543995 RILPL2Q969X0 211 aa17.54■□□□□ 0.4
TNFRSF1A-216ENST00000543995 EVI5LQ96CN4 794 aa17.54■□□□□ 0.4
TNFRSF1A-216ENST00000543995 CLEC11AQ9Y240 323 aa17.54■□□□□ 0.4
TNFRSF1A-216ENST00000543995 PCDHAC2Q9Y5I4 1007 aa17.54■□□□□ 0.4
TNFRSF1A-216ENST00000543995 WNT10BO00744 389 aa17.53■□□□□ 0.4
TNFRSF1A-216ENST00000543995 MYO1BO43795 1136 aa17.53■□□□□ 0.4
TNFRSF1A-216ENST00000543995 IGSF3O75054 1194 aa17.53■□□□□ 0.4
TNFRSF1A-216ENST00000543995 HIRAP54198 1017 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-216ENST00000543995 TTC22Q5TAA0 569 aa17.53■□□□□ 0.4
TNFRSF1A-216ENST00000543995 SLC9C2Q5TAH2 1124 aa17.53■□□□□ 0.4
TNFRSF1A-216ENST00000543995 ZSCAN25Q6NSZ9 544 aa17.53■□□□□ 0.4
TNFRSF1A-216ENST00000543995 CNTROBQ8N137 903 aa17.53■□□□□ 0.4
TNFRSF1A-216ENST00000543995 MTMR14Q8NCE2 650 aa17.53■□□□□ 0.4
TNFRSF1A-216ENST00000543995 FSD1Q9BTV5 496 aa17.53■□□□□ 0.4
TNFRSF1A-216ENST00000543995 ECM29Q5VYK3 1845 aa17.53■□□□□ 0.4
TNFRSF1A-216ENST00000543995 SPDYE2BA6NHP3 402 aa17.52■□□□□ 0.4
TNFRSF1A-216ENST00000543995 SPDYE6P0CI01 402 aa17.52■□□□□ 0.4
TNFRSF1A-216ENST00000543995 CYP7A1P22680 504 aa17.52■□□□□ 0.4
TNFRSF1A-216ENST00000543995 NBPF9Q3BBW0 867 aa17.52■□□□□ 0.4
TNFRSF1A-216ENST00000543995 ZNF384Q8TF68 577 aa17.52■□□□□ 0.4
TNFRSF1A-216ENST00000543995 PRMT6Q96LA8 375 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1A-216ENST00000543995 ZDHHC15Q96MV8 337 aa17.52■□□□□ 0.4
TNFRSF1A-216ENST00000543995 NOL10Q9BSC4 688 aaKnown RBP17.52■□□□□ 0.4
TNFRSF1A-216ENST00000543995 DAGLAQ9Y4D2 1042 aa17.52■□□□□ 0.4
TNFRSF1A-216ENST00000543995 MROH7-TTC4A0A0A0MT08 1334 aa17.52■□□□□ 0.4
TNFRSF1A-216ENST00000543995 LRRFIP1Q32MZ4 808 aaKnown RBP17.52■□□□□ 0.39
TNFRSF1A-216ENST00000543995 KIF3CO14782 793 aa17.51■□□□□ 0.39
TNFRSF1A-216ENST00000543995 POTEIP0CG38 1075 aa17.51■□□□□ 0.39
TNFRSF1A-216ENST00000543995 POTEJP0CG39 1038 aa17.51■□□□□ 0.39
TNFRSF1A-216ENST00000543995 PDE6AP16499 860 aa17.51■□□□□ 0.39
TNFRSF1A-216ENST00000543995 BTDP43251 543 aa17.51■□□□□ 0.39
TNFRSF1A-216ENST00000543995 TMED8Q6PL24 325 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-216ENST00000543995 FAM163AQ96GL9 167 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-216ENST00000543995 TDRD3Q9H7E2 651 aaKnown RBP17.51■□□□□ 0.39
TNFRSF1A-216ENST00000543995 GAKO14976 1311 aa17.51■□□□□ 0.39
TNFRSF1A-216ENST00000543995 ZNF532Q9HCE3 1301 aa17.51■□□□□ 0.39
TNFRSF1A-216ENST00000543995 GSPT1P15170 499 aaKnown RBP17.5■□□□□ 0.39
TNFRSF1A-216ENST00000543995 ADD2P35612 726 aa17.5■□□□□ 0.39
TNFRSF1A-216ENST00000543995 APOBEC3HQ6NTF7 200 aaKnown RBP17.5■□□□□ 0.39
TNFRSF1A-216ENST00000543995 LDHDQ86WU2 507 aa17.5■□□□□ 0.39
TNFRSF1A-216ENST00000543995 ZBED3Q96IU2 234 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF1A-216ENST00000543995 CLRN2A0PK11 232 aa17.49■□□□□ 0.39
TNFRSF1A-216ENST00000543995 BAG3O95817 575 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms