RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, human

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-222	ENST00000543627	TCP10L2	B9ZVM9	353 aa		13.58	□□□□□ -0.24
DDB1-222	ENST00000543627	SPDYE6	P0CI01	402 aa		13.58	□□□□□ -0.24
DDB1-222	ENST00000543627	NF2	P35240	595 aa		13.58	□□□□□ -0.24
DDB1-222	ENST00000543627	HUNK	P57058	714 aa		13.58	□□□□□ -0.24
DDB1-222	ENST00000543627	RASGRF1	Q13972	1273 aa		13.58	□□□□□ -0.24
DDB1-222	ENST00000543627	HSP90AB4P	Q58FF6	505 aa		13.58	□□□□□ -0.24
DDB1-222	ENST00000543627	ERC1	Q8IUD2	1116 aa		13.58	□□□□□ -0.24
DDB1-222	ENST00000543627	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.58	□□□□□ -0.24
DDB1-222	ENST00000543627	CRBN	Q96SW2	442 aa		13.58	□□□□□ -0.24
DDB1-222	ENST00000543627	SERPINA10	Q9UK55	444 aa		13.58	□□□□□ -0.24
DDB1-222	ENST00000543627	NOP58	Q9Y2X3	529 aa	Known RBP	13.58	□□□□□ -0.24
DDB1-222	ENST00000543627	AOX1	Q06278	1338 aa		13.58	□□□□□ -0.24
DDB1-222	ENST00000543627	ZNF609	O15014	1411 aa		13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	SEMA3E	O15041	775 aa		13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	PRDX5	P30044	214 aa		13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	CACNB3	P54284	484 aa		13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	DIXDC1	Q155Q3	683 aa		13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	PI16	Q6UXB8	463 aa		13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	TBC1D9	Q6ZT07	1266 aa		13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	MOB2	Q70IA6	237 aa		13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	AACS	Q86V21	672 aa		13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	DZIP1	Q86YF9	867 aa	Known RBP	13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	SIRT2	Q8IXJ6	389 aa		13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	DEFB129	Q9H1M3	183 aa		13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	ZNF70	Q9UC06	446 aa	Predicted RBP	13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	TLL2	Q9Y6L7	1015 aa		13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	PITPNM2	Q9BZ72	1349 aa		13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	CNTNAP1	P78357	1384 aa		13.57	□□□□□ -0.24
DDB1-222	ENST00000543627	UQCRFS1P1	P0C7P4	283 aa		13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	ERICH6	Q7L0X2	663 aa		13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	SAPCD2	Q86UD0	394 aa		13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	ZGPAT	Q8N5A5	531 aa	Known RBP	13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	SPATA5	Q8NB90	893 aa		13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	MTMR14	Q8NCE2	650 aa		13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	RHPN1	Q8TCX5	695 aa		13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	EAF2	Q96CJ1	260 aa	Predicted RBP	13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	ZBED3	Q96IU2	234 aa	Predicted RBP	13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	CAPNS2	Q96L46	248 aa		13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	TLR7	Q9NYK1	1049 aa	Known RBP	13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	TMOD2	Q9NZR1	351 aa		13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	RAI14	Q9P0K7	980 aa		13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	HMG20B	Q9P0W2	317 aa		13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	FZD1	Q9UP38	647 aa		13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	MAST3	O60307	1309 aa		13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	WDR33	Q9C0J8	1336 aa	Known RBP	13.56	□□□□□ -0.24
DDB1-222	ENST00000543627	RASSF10	A6NK89	507 aa		13.55	□□□□□ -0.24
DDB1-222	ENST00000543627	UBE2Q2L	H0YL09	131 aa		13.55	□□□□□ -0.24
DDB1-222	ENST00000543627	ECE1	P42892	770 aa		13.55	□□□□□ -0.24
DDB1-222	ENST00000543627	ZNF157	P51786	506 aa	Predicted RBP	13.55	□□□□□ -0.24
DDB1-222	ENST00000543627	RASA3	Q14644	834 aa		13.55	□□□□□ -0.24
DDB1-222	ENST00000543627	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.55	□□□□□ -0.24
DDB1-222	ENST00000543627	CLASRP	Q8N2M8	674 aa	Known RBP	13.55	□□□□□ -0.24
DDB1-222	ENST00000543627	KIF1BP	Q96EK5	621 aa		13.55	□□□□□ -0.24
DDB1-222	ENST00000543627	GPR108	Q9NPR9	543 aa		13.55	□□□□□ -0.24
DDB1-222	ENST00000543627	LRP2BP	Q9P2M1	347 aa		13.55	□□□□□ -0.24
DDB1-222	ENST00000543627	SUGT1	Q9Y2Z0	365 aa		13.55	□□□□□ -0.24
DDB1-222	ENST00000543627	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.55	□□□□□ -0.24
DDB1-222	ENST00000543627	ZNF646	O15015	1829 aa	Predicted RBP	13.55	□□□□□ -0.24
DDB1-222	ENST00000543627	TRPM7	Q96QT4	1865 aa		13.55	□□□□□ -0.24
DDB1-222	ENST00000543627	COL1A1	P02452	1464 aa	Predicted RBP	13.55	□□□□□ -0.24
DDB1-222	ENST00000543627	AOC2	O75106	756 aa		13.54	□□□□□ -0.24
DDB1-222	ENST00000543627	IFIT2	P09913	472 aa	Known RBP	13.54	□□□□□ -0.24
DDB1-222	ENST00000543627	MCAM	P43121	646 aa		13.54	□□□□□ -0.24
DDB1-222	ENST00000543627	TNNI2	P48788	182 aa		13.54	□□□□□ -0.24
DDB1-222	ENST00000543627	USP40	Q9NVE5	1235 aa		13.54	□□□□□ -0.24
DDB1-222	ENST00000543627	DBNL	Q9UJU6	430 aa	Known RBP	13.54	□□□□□ -0.24
DDB1-222	ENST00000543627	MYH13	Q9UKX3	1938 aa		13.53	□□□□□ -0.24
DDB1-222	ENST00000543627	SMARCA5	O60264	1052 aa	Predicted RBP	13.53	□□□□□ -0.24
DDB1-222	ENST00000543627	RAB11FIP3	O75154	756 aa		13.53	□□□□□ -0.24
DDB1-222	ENST00000543627	ARID4A	P29374	1257 aa	Predicted RBP	13.53	□□□□□ -0.24
DDB1-222	ENST00000543627	HDLBP	Q00341	1268 aa	Known RBP	13.53	□□□□□ -0.24
DDB1-222	ENST00000543627	TCP10	Q12799	353 aa		13.53	□□□□□ -0.24
DDB1-222	ENST00000543627	TNFAIP1	Q13829	316 aa		13.53	□□□□□ -0.24
DDB1-222	ENST00000543627	SPDYE2	Q495Y8	402 aa		13.53	□□□□□ -0.24
DDB1-222	ENST00000543627	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.53	□□□□□ -0.24
DDB1-222	ENST00000543627	RGMB	Q6NW40	437 aa		13.53	□□□□□ -0.24
DDB1-222	ENST00000543627	HHIPL2	Q6UWX4	724 aa		13.53	□□□□□ -0.24
DDB1-222	ENST00000543627	ARMC9	Q7Z3E5	817 aa		13.53	□□□□□ -0.24
DDB1-222	ENST00000543627	ZDHHC15	Q96MV8	337 aa		13.53	□□□□□ -0.24
DDB1-222	ENST00000543627	ANGEL1	Q9UNK9	670 aa	Known RBP	13.53	□□□□□ -0.24
DDB1-222	ENST00000543627	NDUFB9	Q9Y6M9	179 aa		13.53	□□□□□ -0.24
DDB1-222	ENST00000543627	ZAP70	P43403	619 aa		13.52	□□□□□ -0.25
DDB1-222	ENST00000543627	MKRN3	Q13064	507 aa	Known RBP	13.52	□□□□□ -0.25
DDB1-222	ENST00000543627	SUPT20HL1	Q3ZLR7	823 aa		13.52	□□□□□ -0.25
DDB1-222	ENST00000543627	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.52	□□□□□ -0.25
DDB1-222	ENST00000543627	SLF2	Q8IX21	1173 aa		13.52	□□□□□ -0.25
DDB1-222	ENST00000543627	TMEM39B	Q9GZU3	492 aa		13.52	□□□□□ -0.25
DDB1-222	ENST00000543627	DAGLA	Q9Y4D2	1042 aa		13.52	□□□□□ -0.25
DDB1-222	ENST00000543627	SALL1	Q9NSC2	1324 aa		13.51	□□□□□ -0.25
DDB1-222	ENST00000543627	PPP1R12B	O60237	982 aa	Predicted RBP	13.51	□□□□□ -0.25
DDB1-222	ENST00000543627	HSPA1A	P0DMV8	641 aa	Known RBP	13.51	□□□□□ -0.25
DDB1-222	ENST00000543627	HSPA1B	P0DMV9	641 aa	Known RBP	13.51	□□□□□ -0.25
DDB1-222	ENST00000543627	IRX6	P78412	446 aa	Predicted RBP	13.51	□□□□□ -0.25
DDB1-222	ENST00000543627	MECOM	Q03112	1051 aa		13.51	□□□□□ -0.25
DDB1-222	ENST00000543627	CDC42EP5	Q6NZY7	148 aa		13.51	□□□□□ -0.25
DDB1-222	ENST00000543627	AIDA	Q96BJ3	306 aa		13.51	□□□□□ -0.25
DDB1-222	ENST00000543627	MRI	Q9BWK5	157 aa		13.51	□□□□□ -0.25
DDB1-222	ENST00000543627	LRRCC1	Q9C099	1032 aa		13.51	□□□□□ -0.25
DDB1-222	ENST00000543627	PCDHB15	Q9Y5E8	787 aa		13.51	□□□□□ -0.25
DDB1-222	ENST00000543627	BTD	P43251	543 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 244.5 ms