RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 ABHD17AQ96GS6 310 aa8.14□□□□□ -1.11
MDM2-230ENST00000543323 DNAJC7Q99615 494 aa8.14□□□□□ -1.11
MDM2-230ENST00000543323 CLEC4MQ9H2X3 399 aaPredicted RBP8.14□□□□□ -1.11
MDM2-230ENST00000543323 IFT57Q9NWB7 429 aa8.14□□□□□ -1.11
MDM2-230ENST00000543323 ZNRF3Q9ULT6 936 aa8.14□□□□□ -1.11
MDM2-230ENST00000543323 PRKAB1Q9Y478 270 aa8.14□□□□□ -1.11
MDM2-230ENST00000543323 COL4A3BPQ9Y5P4 624 aa8.14□□□□□ -1.11
MDM2-230ENST00000543323 ZBTB42B2RXF5 422 aa8.13□□□□□ -1.11
MDM2-230ENST00000543323 J3QW42 95 aa8.13□□□□□ -1.11
MDM2-230ENST00000543323 PDPK1O15530 556 aa8.13□□□□□ -1.11
MDM2-230ENST00000543323 MAN1A2O60476 641 aa8.13□□□□□ -1.11
MDM2-230ENST00000543323 DNAJC6O75061 913 aa8.13□□□□□ -1.11
MDM2-230ENST00000543323 DGAT1O75907 488 aa8.13□□□□□ -1.11
MDM2-230ENST00000543323 IMPDH2P12268 514 aa8.13□□□□□ -1.11
MDM2-230ENST00000543323 ZNF157P51786 506 aaPredicted RBP8.13□□□□□ -1.11
MDM2-230ENST00000543323 RASGRF1Q13972 1273 aa8.13□□□□□ -1.11
MDM2-230ENST00000543323 SEPT6Q14141 434 aa8.13□□□□□ -1.11
MDM2-230ENST00000543323 CRIPAKQ8N1N5 446 aa8.13□□□□□ -1.11
MDM2-230ENST00000543323 LILRB2Q8N423 598 aa8.13□□□□□ -1.11
MDM2-230ENST00000543323 APPBP2Q92624 585 aa8.13□□□□□ -1.11
MDM2-230ENST00000543323 SLKQ9H2G2 1235 aaPredicted RBP8.13□□□□□ -1.11
MDM2-230ENST00000543323 CWC22Q9HCG8 908 aaKnown RBP8.13□□□□□ -1.11
MDM2-230ENST00000543323 BRMS1Q9HCU9 246 aa8.13□□□□□ -1.11
MDM2-230ENST00000543323 FANCLQ9NW38 375 aa8.13□□□□□ -1.11
MDM2-230ENST00000543323 SLC35F4A4IF30 521 aa8.12□□□□□ -1.11
MDM2-230ENST00000543323 NRG2O14511 850 aaPredicted RBP8.12□□□□□ -1.11
MDM2-230ENST00000543323 GHRHP01286 108 aa8.12□□□□□ -1.11
MDM2-230ENST00000543323 MLLT1Q03111 559 aaPredicted RBP8.12□□□□□ -1.11
MDM2-230ENST00000543323 LRRC14Q15048 493 aa8.12□□□□□ -1.11
MDM2-230ENST00000543323 DBN1Q16643 649 aa8.12□□□□□ -1.11
MDM2-230ENST00000543323 FAM182BQ5T319 152 aa8.12□□□□□ -1.11
MDM2-230ENST00000543323 TRIM22Q8IYM9 498 aa8.12□□□□□ -1.11
MDM2-230ENST00000543323 RBBP8NLQ8NC74 664 aaPredicted RBP8.12□□□□□ -1.11
MDM2-230ENST00000543323 MICAL1Q8TDZ2 1067 aa8.12□□□□□ -1.11
MDM2-230ENST00000543323 BSNDQ8WZ55 320 aa8.12□□□□□ -1.11
MDM2-230ENST00000543323 POP1Q99575 1024 aaKnown RBP8.12□□□□□ -1.11
MDM2-230ENST00000543323 TMX1Q9H3N1 280 aa8.12□□□□□ -1.11
MDM2-230ENST00000543323 KANSL2Q9H9L4 492 aa8.12□□□□□ -1.11
MDM2-230ENST00000543323 SPC25Q9HBM1 224 aa8.12□□□□□ -1.11
MDM2-230ENST00000543323 ST7Q9NRC1 585 aa8.12□□□□□ -1.11
MDM2-230ENST00000543323 ATXN7L1Q9ULK2 861 aaPredicted RBP8.12□□□□□ -1.11
MDM2-230ENST00000543323 MAPK8IP1Q9UQF2 711 aa8.12□□□□□ -1.11
MDM2-230ENST00000543323 BPNT1O95861 308 aa8.11□□□□□ -1.11
MDM2-230ENST00000543323 B3GALT4O96024 378 aa8.11□□□□□ -1.11
MDM2-230ENST00000543323 PTSQ03393 145 aa8.11□□□□□ -1.11
MDM2-230ENST00000543323 CLCQ05315 142 aa8.11□□□□□ -1.11
MDM2-230ENST00000543323 PCDH1Q08174 1060 aa8.11□□□□□ -1.11
MDM2-230ENST00000543323 PCSK7Q16549 785 aa8.11□□□□□ -1.11
MDM2-230ENST00000543323 LLGL2Q6P1M3 1020 aa8.11□□□□□ -1.11
MDM2-230ENST00000543323 GK5Q6ZS86 529 aa8.11□□□□□ -1.11
MDM2-230ENST00000543323 HFE2Q6ZVN8 426 aa8.11□□□□□ -1.11
MDM2-230ENST00000543323 HOMER1Q86YM7 354 aa8.11□□□□□ -1.11
MDM2-230ENST00000543323 SULF2Q8IWU5 870 aa8.11□□□□□ -1.11
MDM2-230ENST00000543323 RBSNQ9H1K0 784 aa8.11□□□□□ -1.11
MDM2-230ENST00000543323 PCDH12Q9NPG4 1184 aa8.11□□□□□ -1.11
MDM2-230ENST00000543323 ESYT3A0FGR9 886 aa8.1□□□□□ -1.11
MDM2-230ENST00000543323 PPP1R12AO14974 1030 aaPredicted RBP8.1□□□□□ -1.11
MDM2-230ENST00000543323 MARCH6O60337 910 aa8.1□□□□□ -1.11
MDM2-230ENST00000543323 SMNDC1O75940 238 aaKnown RBP eCLIP8.1□□□□□ -1.111e-7■■□□□ 13.3
MDM2-230ENST00000543323 TRIM37O94972 964 aa8.1□□□□□ -1.11
MDM2-230ENST00000543323 CASP7P55210 303 aa8.1□□□□□ -1.11
MDM2-230ENST00000543323 FXNQ16595 210 aa8.1□□□□□ -1.11
MDM2-230ENST00000543323 KANK3Q6NY19 840 aa8.1□□□□□ -1.11
MDM2-230ENST00000543323 LSRQ86X29 649 aaPredicted RBP8.1□□□□□ -1.11
MDM2-230ENST00000543323 GAL3ST3Q96A11 431 aa8.1□□□□□ -1.11
MDM2-230ENST00000543323 GMCL1Q96IK5 515 aa8.1□□□□□ -1.11
MDM2-230ENST00000543323 EMILIN2Q9BXX0 1053 aa8.1□□□□□ -1.11
MDM2-230ENST00000543323 METTL14Q9HCE5 456 aaKnown RBP8.1□□□□□ -1.11
MDM2-230ENST00000543323 ARNTP27540 789 aa8.09□□□□□ -1.11
MDM2-230ENST00000543323 ZNF423Q2M1K9 1284 aa8.09□□□□□ -1.11
MDM2-230ENST00000543323 PKDCCQ504Y2 493 aa8.09□□□□□ -1.11
MDM2-230ENST00000543323 ARSHQ5FYA8 562 aa8.09□□□□□ -1.11
MDM2-230ENST00000543323 LARP1BQ659C4 914 aaKnown RBP8.09□□□□□ -1.11
MDM2-230ENST00000543323 CEP135Q66GS9 1140 aa8.09□□□□□ -1.11
MDM2-230ENST00000543323 KIAA0907Q7Z7F0 614 aaPredicted RBP8.09□□□□□ -1.11
MDM2-230ENST00000543323 STK35Q8TDR2 534 aa8.09□□□□□ -1.11
MDM2-230ENST00000543323 CHMP4AQ9BY43 222 aa8.09□□□□□ -1.11
MDM2-230ENST00000543323 TNKS2Q9H2K2 1166 aa8.09□□□□□ -1.11
MDM2-230ENST00000543323 EHMT1Q9H9B1 1298 aa8.09□□□□□ -1.11
MDM2-230ENST00000543323 TMEM260Q9NX78 707 aa8.09□□□□□ -1.11
MDM2-230ENST00000543323 DNAJB12Q9NXW2 375 aaKnown RBP8.09□□□□□ -1.11
MDM2-230ENST00000543323 SOX13Q9UN79 622 aa8.09□□□□□ -1.11
MDM2-230ENST00000543323 PHF24Q9UPV7 400 aa8.09□□□□□ -1.11
MDM2-230ENST00000543323 EIF2AK2P19525 551 aaKnown RBP8.08□□□□□ -1.12
MDM2-230ENST00000543323 FGFR3P22607 806 aa8.08□□□□□ -1.12
MDM2-230ENST00000543323 RPL6Q02878 288 aaKnown RBP8.08□□□□□ -1.12
MDM2-230ENST00000543323 SCARA3Q6AZY7 606 aa8.08□□□□□ -1.12
MDM2-230ENST00000543323 GRIN3AQ8TCU5 1115 aa8.08□□□□□ -1.12
MDM2-230ENST00000543323 ZNF837Q96EG3 531 aaPredicted RBP8.08□□□□□ -1.12
MDM2-230ENST00000543323 CBX8Q9HC52 389 aa8.08□□□□□ -1.12
MDM2-230ENST00000543323 AXIN1O15169 862 aa8.07□□□□□ -1.12
MDM2-230ENST00000543323 GFRA3O60609 400 aa8.07□□□□□ -1.12
MDM2-230ENST00000543323 PTPRAP18433 802 aa8.07□□□□□ -1.12
MDM2-230ENST00000543323 ZNF252P-AS1Q0IIN9 211 aa8.07□□□□□ -1.12
MDM2-230ENST00000543323 SQSTM1Q13501 440 aa8.07□□□□□ -1.12
MDM2-230ENST00000543323 VN1R5Q7Z5H4 357 aa8.07□□□□□ -1.12
MDM2-230ENST00000543323 CCDC155Q8N6L0 562 aa8.07□□□□□ -1.12
MDM2-230ENST00000543323 C19orf47Q8N9M1 422 aaKnown RBP8.07□□□□□ -1.12
MDM2-230ENST00000543323 UBE2OQ9C0C9 1292 aaKnown RBP8.07□□□□□ -1.12
MDM2-230ENST00000543323 ADAM19Q9H013 955 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms