RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 FARP2O94887 1054 aaPredicted RBP6.25□□□□□ -1.41
LIMS1-214ENST00000542845 FMNL1O95466 1100 aaPredicted RBP6.25□□□□□ -1.41
LIMS1-214ENST00000542845 SYN1P17600 705 aa6.25□□□□□ -1.41
LIMS1-214ENST00000542845 ATP2B4P23634 1241 aa6.25□□□□□ -1.41
LIMS1-214ENST00000542845 GRK4P32298 578 aa6.25□□□□□ -1.41
LIMS1-214ENST00000542845 GJA8P48165 433 aa6.25□□□□□ -1.41
LIMS1-214ENST00000542845 DLGAP5Q15398 846 aa6.25□□□□□ -1.41
LIMS1-214ENST00000542845 SUPT20HL1Q3ZLR7 823 aa6.25□□□□□ -1.41
LIMS1-214ENST00000542845 DACT2Q5SW24 774 aa6.25□□□□□ -1.41
LIMS1-214ENST00000542845 HOMEZQ8IX15 550 aa6.25□□□□□ -1.41
LIMS1-214ENST00000542845 ANKRD13AQ8IZ07 590 aa6.25□□□□□ -1.41
LIMS1-214ENST00000542845 JARID2Q92833 1246 aaPredicted RBP6.25□□□□□ -1.41
LIMS1-214ENST00000542845 ZMYND8Q9ULU4 1186 aaPredicted RBP6.25□□□□□ -1.41
LIMS1-214ENST00000542845 COL3A1P02461 1466 aaPredicted RBP6.25□□□□□ -1.41
LIMS1-214ENST00000542845 HTTP42858 3142 aa6.25□□□□□ -1.41
LIMS1-214ENST00000542845 GJB1P08034 283 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 RBM5P52756 815 aaKnown RBP eCLIP6.24□□□□□ -1.41
LIMS1-214ENST00000542845 UBXN2AP68543 259 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 GTF2IP78347 998 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 LACTBP83111 547 aaPredicted RBP6.24□□□□□ -1.41
LIMS1-214ENST00000542845 MAP3K11Q16584 847 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 TTLL5Q6EMB2 1281 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 LRP10Q7Z4F1 713 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 GPIHBP1Q8IV16 184 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 ANKRD18AQ8IVF6 992 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 C7orf61Q8IZ16 206 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 FAM43AQ8N2R8 423 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 KRI1Q8N9T8 703 aaKnown RBP6.24□□□□□ -1.41
LIMS1-214ENST00000542845 U2AF1L4Q8WU68 220 aaKnown RBP6.24□□□□□ -1.41
LIMS1-214ENST00000542845 BRI3BPQ8WY22 251 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 TRIM47Q96LD4 638 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 CPA4Q9UI42 421 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 TSPYL4Q9UJ04 414 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 RIPOR2Q9Y4F9 1068 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 PCDHAC2Q9Y5I4 1007 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 A0A0C4DFX4 3053 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 XDHP47989 1333 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 ERBB4Q15303 1308 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 IRS2Q9Y4H2 1338 aa6.24□□□□□ -1.41
LIMS1-214ENST00000542845 ZNF646O15015 1829 aaPredicted RBP6.23□□□□□ -1.41
LIMS1-214ENST00000542845 SPEF2Q9C093 1822 aa6.23□□□□□ -1.41
LIMS1-214ENST00000542845 MYO1BO43795 1136 aa6.23□□□□□ -1.41
LIMS1-214ENST00000542845 TLR2O60603 784 aa6.23□□□□□ -1.41
LIMS1-214ENST00000542845 SGPL1O95470 568 aa6.23□□□□□ -1.41
LIMS1-214ENST00000542845 HOXD10P28358 340 aa6.23□□□□□ -1.41
LIMS1-214ENST00000542845 PSMC4P43686 418 aa6.23□□□□□ -1.41
LIMS1-214ENST00000542845 GTF2A2P52657 109 aa6.23□□□□□ -1.41
LIMS1-214ENST00000542845 IER5LQ5T953 404 aa6.23□□□□□ -1.41
LIMS1-214ENST00000542845 STRIP1Q5VSL9 837 aa6.23□□□□□ -1.41
LIMS1-214ENST00000542845 PAWRQ96IZ0 340 aaKnown RBP6.23□□□□□ -1.41
LIMS1-214ENST00000542845 MS4A4AQ96JQ5 239 aa6.23□□□□□ -1.41
LIMS1-214ENST00000542845 UNC93B1Q9H1C4 597 aa6.23□□□□□ -1.41
LIMS1-214ENST00000542845 SRRDQ9UH36 339 aa6.23□□□□□ -1.41
LIMS1-214ENST00000542845 TRIM35Q9UPQ4 493 aa6.23□□□□□ -1.41
LIMS1-214ENST00000542845 MYO3BQ8WXR4 1341 aa6.23□□□□□ -1.41
LIMS1-214ENST00000542845 LAMB1P07942 1786 aa6.22□□□□□ -1.41
LIMS1-214ENST00000542845 PER1O15534 1290 aaPredicted RBP6.22□□□□□ -1.41
LIMS1-214ENST00000542845 GNRH1P01148 92 aa6.22□□□□□ -1.41
LIMS1-214ENST00000542845 OSBPP22059 807 aa6.22□□□□□ -1.41
LIMS1-214ENST00000542845 PRMT2P55345 433 aa6.22□□□□□ -1.41
LIMS1-214ENST00000542845 RASA3Q14644 834 aa6.22□□□□□ -1.41
LIMS1-214ENST00000542845 CFAP100Q494V2 611 aa6.22□□□□□ -1.41
LIMS1-214ENST00000542845 CCDC152Q4G0S7 254 aa6.22□□□□□ -1.41
LIMS1-214ENST00000542845 GPR153Q6NV75 609 aa6.22□□□□□ -1.41
LIMS1-214ENST00000542845 UBE2Q1Q7Z7E8 422 aa6.22□□□□□ -1.41
LIMS1-214ENST00000542845 TXNRD3Q86VQ6 643 aa6.22□□□□□ -1.41
LIMS1-214ENST00000542845 GDF15Q99988 308 aa6.22□□□□□ -1.41
LIMS1-214ENST00000542845 UBE2OQ9C0C9 1292 aaKnown RBP6.22□□□□□ -1.41
LIMS1-214ENST00000542845 LAS1LQ9Y4W2 734 aaKnown RBP6.22□□□□□ -1.41
LIMS1-214ENST00000542845 SSC5DA1L4H1 1573 aa6.22□□□□□ -1.41
LIMS1-214ENST00000542845 MYPNQ86TC9 1320 aa6.22□□□□□ -1.41
LIMS1-214ENST00000542845 RPTORQ8N122 1335 aa6.22□□□□□ -1.41
LIMS1-214ENST00000542845 ALPK3Q96L96 1907 aa6.21□□□□□ -1.41
LIMS1-214ENST00000542845 CUL9Q8IWT3 2517 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 ECM29Q5VYK3 1845 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 OTOFQ9HC10 1997 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 UNCXA6NJT0 531 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 BTBD19C9JJ37 291 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 CETPP11597 493 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 CTGFP29279 349 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 BMP8BP34820 402 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 CCT4P50991 539 aaKnown RBP6.21□□□□□ -1.42
LIMS1-214ENST00000542845 TDHQ8IZJ6 230 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 PLBD2Q8NHP8 589 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 FAM122AQ96E09 287 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 PRMT6Q96LA8 375 aaPredicted RBP6.21□□□□□ -1.42
LIMS1-214ENST00000542845 DEFB118Q96PH6 123 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 ISCA1Q9BUE6 129 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 TMEM121BQ9BXQ6 578 aaPredicted RBP6.21□□□□□ -1.42
LIMS1-214ENST00000542845 COA1Q9GZY4 146 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 CHPF2Q9P2E5 772 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 MINPP1Q9UNW1 487 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 JAG2Q9Y219 1238 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 PPP2R3BQ9Y5P8 575 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 CSADQ9Y600 493 aa6.21□□□□□ -1.42
LIMS1-214ENST00000542845 TCP10L2B9ZVM9 353 aa6.2□□□□□ -1.42
LIMS1-214ENST00000542845 ADCY3O60266 1144 aa6.2□□□□□ -1.42
LIMS1-214ENST00000542845 PDE8AO60658 829 aa6.2□□□□□ -1.42
LIMS1-214ENST00000542845 ZMYND10O75800 440 aa6.2□□□□□ -1.42
LIMS1-214ENST00000542845 ELNP15502 786 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms