RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 ANGEL2Q5VTE6 544 aaKnown RBP17.37■□□□□ 0.37
DDX11-221ENST00000542661 EXOC6Q8TAG9 804 aa17.37■□□□□ 0.37
DDX11-221ENST00000542661 TEKT1Q969V4 418 aa17.37■□□□□ 0.37
DDX11-221ENST00000542661 HMG20BQ9P0W2 317 aa17.37■□□□□ 0.37
DDX11-221ENST00000542661 CRKP46108 304 aa17.36■□□□□ 0.37
DDX11-221ENST00000542661 HDAC1Q13547 482 aaPredicted RBP17.36■□□□□ 0.37
DDX11-221ENST00000542661 USP48Q86UV5 1035 aa17.36■□□□□ 0.37
DDX11-221ENST00000542661 GLIS2Q9BZE0 524 aaPredicted RBP17.36■□□□□ 0.37
DDX11-221ENST00000542661 POLR2AP24928 1970 aaKnown RBP17.35■□□□□ 0.37
DDX11-221ENST00000542661 MCAMP43121 646 aa17.35■□□□□ 0.37
DDX11-221ENST00000542661 GRIK5Q16478 980 aa17.35■□□□□ 0.37
DDX11-221ENST00000542661 HHIPL2Q6UWX4 724 aa17.35■□□□□ 0.37
DDX11-221ENST00000542661 APOBEC3FQ8IUX4 373 aaKnown RBP17.35■□□□□ 0.37
DDX11-221ENST00000542661 SLF2Q8IX21 1173 aa17.35■□□□□ 0.37
DDX11-221ENST00000542661 TLR7Q9NYK1 1049 aaKnown RBP17.35■□□□□ 0.37
DDX11-221ENST00000542661 ABCF2Q9UG63 623 aa17.35■□□□□ 0.37
DDX11-221ENST00000542661 IGSF3O75054 1194 aa17.34■□□□□ 0.37
DDX11-221ENST00000542661 ASTN2O75129 1339 aaPredicted RBP17.34■□□□□ 0.37
DDX11-221ENST00000542661 PRMT6Q96LA8 375 aaPredicted RBP17.34■□□□□ 0.37
DDX11-221ENST00000542661 ZDHHC15Q96MV8 337 aa17.34■□□□□ 0.37
DDX11-221ENST00000542661 RWDD1Q9H446 243 aaPredicted RBP17.34■□□□□ 0.37
DDX11-221ENST00000542661 TMEM88BA6NKF7 163 aa17.33■□□□□ 0.36
DDX11-221ENST00000542661 TRAF5O00463 557 aa17.33■□□□□ 0.36
DDX11-221ENST00000542661 PRDX5P30044 214 aa17.33■□□□□ 0.36
DDX11-221ENST00000542661 ERICH6Q7L0X2 663 aa17.33■□□□□ 0.36
DDX11-221ENST00000542661 DZIP1Q86YF9 867 aaKnown RBP17.33■□□□□ 0.36
DDX11-221ENST00000542661 GCC1Q96CN9 775 aa17.33■□□□□ 0.36
DDX11-221ENST00000542661 CREBZFQ9NS37 354 aa17.33■□□□□ 0.36
DDX11-221ENST00000542661 ECM29Q5VYK3 1845 aa17.33■□□□□ 0.36
DDX11-221ENST00000542661 PI16Q6UXB8 463 aa17.32■□□□□ 0.36
DDX11-221ENST00000542661 BCL11AQ9H165 835 aa17.32■□□□□ 0.36
DDX11-221ENST00000542661 SNRKQ9NRH2 765 aa17.32■□□□□ 0.36
DDX11-221ENST00000542661 ZBTB47Q9UFB7 747 aaPredicted RBP17.32■□□□□ 0.36
DDX11-221ENST00000542661 TRPM7Q96QT4 1865 aa17.32■□□□□ 0.36
DDX11-221ENST00000542661 AKAP11Q9UKA4 1901 aa17.31■□□□□ 0.36
DDX11-221ENST00000542661 ADM5C9JUS6 153 aa17.31■□□□□ 0.36
DDX11-221ENST00000542661 SMARCA5O60264 1052 aaPredicted RBP17.31■□□□□ 0.36
DDX11-221ENST00000542661 GSTO1P78417 241 aa17.31■□□□□ 0.36
DDX11-221ENST00000542661 SPDYE2Q495Y8 402 aa17.31■□□□□ 0.36
DDX11-221ENST00000542661 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.31■□□□□ 0.36
DDX11-221ENST00000542661 LRP2BPQ9P2M1 347 aa17.31■□□□□ 0.36
DDX11-221ENST00000542661 PCDHAC2Q9Y5I4 1007 aa17.31■□□□□ 0.36
DDX11-221ENST00000542661 CELF2O95319 508 aaKnown RBP17.3■□□□□ 0.36
DDX11-221ENST00000542661 TNFAIP1Q13829 316 aa17.3■□□□□ 0.36
DDX11-221ENST00000542661 APOBEC3HQ6NTF7 200 aaKnown RBP17.3■□□□□ 0.36
DDX11-221ENST00000542661 TBC1D9Q6ZT07 1266 aa17.3■□□□□ 0.36
DDX11-221ENST00000542661 GPATCH3Q96I76 525 aa17.3■□□□□ 0.36
DDX11-221ENST00000542661 VEZTQ9HBM0 779 aa17.3■□□□□ 0.36
DDX11-221ENST00000542661 TMOD2Q9NZR1 351 aa17.3■□□□□ 0.36
DDX11-221ENST00000542661 RAI14Q9P0K7 980 aa17.3■□□□□ 0.36
DDX11-221ENST00000542661 ZNF70Q9UC06 446 aaPredicted RBP17.3■□□□□ 0.36
DDX11-221ENST00000542661 PPP2R3BQ9Y5P8 575 aa17.3■□□□□ 0.36
DDX11-221ENST00000542661 CLRN2A0PK11 232 aa17.29■□□□□ 0.36
DDX11-221ENST00000542661 CYP2E1P05181 493 aaPredicted RBP17.29■□□□□ 0.36
DDX11-221ENST00000542661 LDHCP07864 332 aa17.29■□□□□ 0.36
DDX11-221ENST00000542661 ZAP70P43403 619 aa17.29■□□□□ 0.36
DDX11-221ENST00000542661 IRX6P78412 446 aaPredicted RBP17.29■□□□□ 0.36
DDX11-221ENST00000542661 MECOMQ03112 1051 aa17.29■□□□□ 0.36
DDX11-221ENST00000542661 DIXDC1Q155Q3 683 aa17.29■□□□□ 0.36
DDX11-221ENST00000542661 CST9Q5W186 159 aa17.29■□□□□ 0.36
DDX11-221ENST00000542661 CDCA5Q96FF9 252 aa17.29■□□□□ 0.36
DDX11-221ENST00000542661 FAM163AQ96GL9 167 aaPredicted RBP17.29■□□□□ 0.36
DDX11-221ENST00000542661 DEFB129Q9H1M3 183 aa17.29■□□□□ 0.36
DDX11-221ENST00000542661 TDRD3Q9H7E2 651 aaKnown RBP17.29■□□□□ 0.36
DDX11-221ENST00000542661 DAGLAQ9Y4D2 1042 aa17.29■□□□□ 0.36
DDX11-221ENST00000542661 MYH2Q9UKX2 1941 aa17.28■□□□□ 0.36
DDX11-221ENST00000542661 ATP5JP18859 108 aa17.28■□□□□ 0.36
DDX11-221ENST00000542661 TNNI2P48788 182 aa17.28■□□□□ 0.36
DDX11-221ENST00000542661 FMR1Q06787 632 aaKnown RBP eCLIP17.28■□□□□ 0.36
DDX11-221ENST00000542661 TTF1Q15361 905 aaPredicted RBP17.28■□□□□ 0.36
DDX11-221ENST00000542661 FKBP1CQ5VVH2 108 aa17.28■□□□□ 0.36
DDX11-221ENST00000542661 TMED8Q6PL24 325 aaPredicted RBP17.28■□□□□ 0.36
DDX11-221ENST00000542661 NSUN4Q96CB9 384 aaKnown RBP17.28■□□□□ 0.36
DDX11-221ENST00000542661 ZNF408Q9H9D4 720 aa17.28■□□□□ 0.36
DDX11-221ENST00000542661 GAKO14976 1311 aa17.27■□□□□ 0.36
DDX11-221ENST00000542661 NF2P35240 595 aa17.27■□□□□ 0.36
DDX11-221ENST00000542661 ECHDC1Q9NTX5 307 aa17.27■□□□□ 0.36
DDX11-221ENST00000542661 MROH7-TTC4A0A0A0MT08 1334 aa17.26■□□□□ 0.35
DDX11-221ENST00000542661 AOX1Q06278 1338 aa17.26■□□□□ 0.35
DDX11-221ENST00000542661 MAP4K4O95819 1239 aaPredicted RBP17.26■□□□□ 0.35
DDX11-221ENST00000542661 CENPBP07199 599 aaPredicted RBP17.26■□□□□ 0.35
DDX11-221ENST00000542661 ANKRD45Q5TZF3 282 aa17.26■□□□□ 0.35
DDX11-221ENST00000542661 SMC5Q8IY18 1101 aa17.26■□□□□ 0.35
DDX11-221ENST00000542661 C2orf69Q8N8R5 385 aa17.26■□□□□ 0.35
DDX11-221ENST00000542661 ABT1Q9ULW3 272 aaKnown RBP17.26■□□□□ 0.35
DDX11-221ENST00000542661 SCAF8Q9UPN6 1271 aaKnown RBP17.26■□□□□ 0.35
DDX11-221ENST00000542661 FKBP1BP68106 108 aa17.25■□□□□ 0.35
DDX11-221ENST00000542661 MAP3K12Q12852 859 aa17.25■□□□□ 0.35
DDX11-221ENST00000542661 RASA3Q14644 834 aa17.25■□□□□ 0.35
DDX11-221ENST00000542661 SUPT20HL1Q3ZLR7 823 aa17.25■□□□□ 0.35
DDX11-221ENST00000542661 NAA16Q6N069 864 aaPredicted RBP17.25■□□□□ 0.35
DDX11-221ENST00000542661 CDC42EP5Q6NZY7 148 aa17.25■□□□□ 0.35
DDX11-221ENST00000542661 DLK2Q6UY11 383 aa17.25■□□□□ 0.35
DDX11-221ENST00000542661 FAM83AQ86UY5 434 aa17.25■□□□□ 0.35
DDX11-221ENST00000542661 HAUS7Q99871 368 aa17.25■□□□□ 0.35
DDX11-221ENST00000542661 NOL10Q9BSC4 688 aaKnown RBP17.25■□□□□ 0.35
DDX11-221ENST00000542661 GBA2Q9HCG7 927 aaPredicted RBP17.25■□□□□ 0.35
DDX11-221ENST00000542661 PIH1D3Q9NQM4 214 aaKnown RBP17.25■□□□□ 0.35
DDX11-221ENST00000542661 USP40Q9NVE5 1235 aa17.25■□□□□ 0.35
DDX11-221ENST00000542661 TLL2Q9Y6L7 1015 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms