RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 MMP14P50281 582 aa12.69□□□□□ -0.38
CHFR-220ENST00000541817 RIC3Q7Z5B4 369 aa12.69□□□□□ -0.38
CHFR-220ENST00000541817 MTMR14Q8NCE2 650 aa12.69□□□□□ -0.38
CHFR-220ENST00000541817 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.69□□□□□ -0.38
CHFR-220ENST00000541817 TMEM39BQ9GZU3 492 aa12.69□□□□□ -0.38
CHFR-220ENST00000541817 TDRD3Q9H7E2 651 aaKnown RBP12.69□□□□□ -0.38
CHFR-220ENST00000541817 MGAMO43451 1857 aa12.69□□□□□ -0.38
CHFR-220ENST00000541817 POTEB2H3BUK9 544 aa12.68□□□□□ -0.38
CHFR-220ENST00000541817 PLA2G5P39877 138 aa12.68□□□□□ -0.38
CHFR-220ENST00000541817 TRIM28Q13263 835 aaKnown RBP12.68□□□□□ -0.38
CHFR-220ENST00000541817 NECAB2Q7Z6G3 386 aa12.68□□□□□ -0.38
CHFR-220ENST00000541817 ZKSCAN4Q969J2 545 aaPredicted RBP12.68□□□□□ -0.38
CHFR-220ENST00000541817 TEPSINQ96N21 525 aa12.68□□□□□ -0.38
CHFR-220ENST00000541817 GREM2Q9H772 168 aa12.68□□□□□ -0.38
CHFR-220ENST00000541817 CD209Q9NNX6 404 aa12.68□□□□□ -0.38
CHFR-220ENST00000541817 ZNF70Q9UC06 446 aaPredicted RBP12.68□□□□□ -0.38
CHFR-220ENST00000541817 TAOK2Q9UL54 1235 aa12.68□□□□□ -0.38
CHFR-220ENST00000541817 SNCAIPQ9Y6H5 919 aa12.68□□□□□ -0.38
CHFR-220ENST00000541817 SPDYE5A6NIY4 337 aa12.67□□□□□ -0.38
CHFR-220ENST00000541817 PDHXO00330 501 aa12.67□□□□□ -0.38
CHFR-220ENST00000541817 MDM2Q00987 491 aaPredicted RBP12.67□□□□□ -0.38
CHFR-220ENST00000541817 HDGFL1Q5TGJ6 251 aa12.67□□□□□ -0.38
CHFR-220ENST00000541817 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
CHFR-220ENST00000541817 MAFAQ8NHW3 353 aaPredicted RBP12.67□□□□□ -0.38
CHFR-220ENST00000541817 FAM122AQ96E09 287 aa12.67□□□□□ -0.38
CHFR-220ENST00000541817 CDC5LQ99459 802 aaKnown RBP12.67□□□□□ -0.38
CHFR-220ENST00000541817 BSDC1Q9NW68 430 aaPredicted RBP12.67□□□□□ -0.38
CHFR-220ENST00000541817 TIMELESSQ9UNS1 1208 aa12.67□□□□□ -0.38
CHFR-220ENST00000541817 LAS1LQ9Y4W2 734 aaKnown RBP12.67□□□□□ -0.38
CHFR-220ENST00000541817 LAMA2P24043 3122 aaKnown RBP12.67□□□□□ -0.38
CHFR-220ENST00000541817 PCCAP05165 728 aaPredicted RBP12.66□□□□□ -0.38
CHFR-220ENST00000541817 SNAPC2Q13487 334 aa12.66□□□□□ -0.38
CHFR-220ENST00000541817 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.66□□□□□ -0.38
CHFR-220ENST00000541817 CDX2Q99626 313 aaPredicted RBP12.66□□□□□ -0.38
CHFR-220ENST00000541817 LEMD3Q9Y2U8 911 aa12.66□□□□□ -0.38
CHFR-220ENST00000541817 ADGRA2Q96PE1 1338 aa12.65□□□□□ -0.38
CHFR-220ENST00000541817 TMEM265A0A087WTH1 108 aa12.65□□□□□ -0.38
CHFR-220ENST00000541817 FLT3LGP49771 235 aa12.65□□□□□ -0.38
CHFR-220ENST00000541817 CTSWP56202 376 aa12.65□□□□□ -0.38
CHFR-220ENST00000541817 MIER1Q8N108 512 aa12.65□□□□□ -0.38
CHFR-220ENST00000541817 HELBQ8NG08 1087 aaPredicted RBP12.65□□□□□ -0.38
CHFR-220ENST00000541817 TTLL11Q8NHH1 800 aa12.65□□□□□ -0.38
CHFR-220ENST00000541817 CRISPLD2Q9H0B8 497 aa12.65□□□□□ -0.38
CHFR-220ENST00000541817 PHAXQ9H814 394 aaKnown RBP12.65□□□□□ -0.38
CHFR-220ENST00000541817 ZCCHC17Q9NP64 241 aaKnown RBP12.65□□□□□ -0.38
CHFR-220ENST00000541817 CYP2C8P10632 490 aa12.64□□□□□ -0.39
CHFR-220ENST00000541817 CACNB3P54284 484 aa12.64□□□□□ -0.39
CHFR-220ENST00000541817 FCGRTP55899 365 aa12.64□□□□□ -0.39
CHFR-220ENST00000541817 RIPK4P57078 832 aa12.64□□□□□ -0.39
CHFR-220ENST00000541817 SPDYE2Q495Y8 402 aa12.64□□□□□ -0.39
CHFR-220ENST00000541817 ERO1BQ86YB8 467 aa12.64□□□□□ -0.39
CHFR-220ENST00000541817 MYLIPQ8WY64 445 aa12.64□□□□□ -0.39
CHFR-220ENST00000541817 WRNIP1Q96S55 665 aa12.64□□□□□ -0.39
CHFR-220ENST00000541817 PAK6Q9NQU5 681 aaPredicted RBP12.64□□□□□ -0.39
CHFR-220ENST00000541817 HSP90B1P14625 803 aaKnown RBP12.63□□□□□ -0.39
CHFR-220ENST00000541817 KCNJ4P48050 445 aa12.63□□□□□ -0.39
CHFR-220ENST00000541817 CWC25Q9NXE8 425 aaPredicted RBP12.63□□□□□ -0.39
CHFR-220ENST00000541817 DBF4Q9UBU7 674 aaPredicted RBP12.63□□□□□ -0.39
CHFR-220ENST00000541817 MAPK8IP3Q9UPT6 1336 aa12.62□□□□□ -0.39
CHFR-220ENST00000541817 DDX60LQ5H9U9 1706 aaKnown RBP12.62□□□□□ -0.39
CHFR-220ENST00000541817 ARAP2Q8WZ64 1704 aa12.62□□□□□ -0.39
CHFR-220ENST00000541817 TNFRSF10AO00220 468 aa12.62□□□□□ -0.39
CHFR-220ENST00000541817 TAF5LO75529 589 aa12.62□□□□□ -0.39
CHFR-220ENST00000541817 PPIL2Q13356 520 aa12.62□□□□□ -0.39
CHFR-220ENST00000541817 TNFAIP1Q13829 316 aa12.62□□□□□ -0.39
CHFR-220ENST00000541817 ZNF697Q5TEC3 545 aa12.62□□□□□ -0.39
CHFR-220ENST00000541817 FAM109BQ6ICB4 259 aaPredicted RBP12.62□□□□□ -0.39
CHFR-220ENST00000541817 ANKRD23Q86SG2 305 aa12.62□□□□□ -0.39
CHFR-220ENST00000541817 CCDC191Q8NCU4 936 aa12.62□□□□□ -0.39
CHFR-220ENST00000541817 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.62□□□□□ -0.393e-7■■■■□ 21.6
CHFR-220ENST00000541817 HYPKQ9NX55 129 aa12.62□□□□□ -0.39
CHFR-220ENST00000541817 BCRP11274 1271 aa12.61□□□□□ -0.39
CHFR-220ENST00000541817 GOLGA2Q08379 1002 aa12.61□□□□□ -0.39
CHFR-220ENST00000541817 TRIM32Q13049 653 aa12.61□□□□□ -0.39
CHFR-220ENST00000541817 SYMPKQ92797 1274 aaKnown RBP12.61□□□□□ -0.39
CHFR-220ENST00000541817 C11orf49Q9H6J7 331 aa12.61□□□□□ -0.39
CHFR-220ENST00000541817 MYH3P11055 1940 aa12.6□□□□□ -0.39
CHFR-220ENST00000541817 HOXD11P31277 338 aaPredicted RBP12.6□□□□□ -0.39
CHFR-220ENST00000541817 INPP5BP32019 993 aa12.6□□□□□ -0.39
CHFR-220ENST00000541817 IGHMBP2P38935 993 aaKnown RBP12.6□□□□□ -0.39
CHFR-220ENST00000541817 CHRNDQ07001 517 aa12.6□□□□□ -0.39
CHFR-220ENST00000541817 MOGSQ13724 837 aa12.6□□□□□ -0.39
CHFR-220ENST00000541817 MIGA2Q7L4E1 593 aa12.6□□□□□ -0.39
CHFR-220ENST00000541817 DZIP1LQ8IYY4 767 aaKnown RBP12.6□□□□□ -0.39
CHFR-220ENST00000541817 NBPF3Q9H094 633 aa12.6□□□□□ -0.39
CHFR-220ENST00000541817 TTF2Q9UNY4 1162 aaKnown RBP12.6□□□□□ -0.39
CHFR-220ENST00000541817 DOCK3Q8IZD9 2030 aa12.6□□□□□ -0.39
CHFR-220ENST00000541817 TNPO2O14787 897 aaKnown RBP12.59□□□□□ -0.39
CHFR-220ENST00000541817 NEUROD2Q15784 382 aa12.59□□□□□ -0.39
CHFR-220ENST00000541817 ANKRD2Q9GZV1 360 aa12.59□□□□□ -0.39
CHFR-220ENST00000541817 SEMA6BQ9H3T3 888 aa12.59□□□□□ -0.39
CHFR-220ENST00000541817 BABAM1Q9NWV8 329 aa12.59□□□□□ -0.39
CHFR-220ENST00000541817 PFASO15067 1338 aa12.59□□□□□ -0.39
CHFR-220ENST00000541817 CHL1O00533 1208 aa12.58□□□□□ -0.4
CHFR-220ENST00000541817 TNNI2P48788 182 aa12.58□□□□□ -0.4
CHFR-220ENST00000541817 MAP3K12Q12852 859 aa12.58□□□□□ -0.4
CHFR-220ENST00000541817 GRIK5Q16478 980 aa12.58□□□□□ -0.4
CHFR-220ENST00000541817 DUSP27Q5VZP5 1158 aa12.58□□□□□ -0.4
CHFR-220ENST00000541817 GPAT2Q6NUI2 795 aa12.58□□□□□ -0.4
CHFR-220ENST00000541817 USP38Q8NB14 1042 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms