RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 TBC1D25Q3MII6 688 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 MICALCLQ6ZW33 695 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 RELL1Q8IUW5 271 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 RNF168Q8IYW5 571 aaPredicted RBP7.1□□□□□ -1.27
LMO3-225ENST00000541295 ZNF280CQ8ND82 737 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 EXOC6Q8TAG9 804 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 ANKRD24Q8TF21 1146 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 MIEF2Q96C03 454 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 TRPV5Q9NQA5 729 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 POLKQ9UBT6 870 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 ZMAT5Q9UDW3 170 aaKnown RBP7.1□□□□□ -1.27
LMO3-225ENST00000541295 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.1□□□□□ -1.27
LMO3-225ENST00000541295 KNDC1Q76NI1 1749 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 TMEM110-MUSTN1A8MSY1 372 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 GTF2F1P35269 517 aaKnown RBP eCLIP7.1□□□□□ -1.27
LMO3-225ENST00000541295 HSPA2P54652 639 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 DEUP1Q05D60 604 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 KIAA1328Q86T90 577 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 PDGFDQ9GZP0 370 aaPredicted RBP7.1□□□□□ -1.27
LMO3-225ENST00000541295 MRFAP1Q9Y605 127 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 TTC21BQ7Z4L5 1316 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 CEP104O60308 925 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 RPL17P18621 184 aaKnown RBP7.1□□□□□ -1.27
LMO3-225ENST00000541295 KIAA0753Q2KHM9 967 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.1□□□□□ -1.27
LMO3-225ENST00000541295 SLX1AQ9BQ83 275 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 MKL2Q9ULH7 1088 aa7.1□□□□□ -1.27
LMO3-225ENST00000541295 BOLA2-SMG1P6H3BVE0 249 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 MTRF1O75570 445 aaKnown RBP7.09□□□□□ -1.27
LMO3-225ENST00000541295 S100BP04271 92 aaPredicted RBP7.09□□□□□ -1.27
LMO3-225ENST00000541295 NF2P35240 595 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 MAGEA9P43362 315 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 NSUN2Q08J23 767 aaKnown RBP eCLIP7.09□□□□□ -1.27
LMO3-225ENST00000541295 PDIA5Q14554 519 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 SKIV2LQ15477 1246 aaKnown RBP7.09□□□□□ -1.27
LMO3-225ENST00000541295 CCDC158Q5M9N0 1113 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 KCNV1Q6PIU1 500 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 GBP6Q6ZN66 633 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 CCDC191Q8NCU4 936 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 GSDMAQ96QA5 445 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 PPP1R9BQ96SB3 815 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 SLC7A5P2Q9GIP4 190 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 TMEM165Q9HC07 324 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 TBC1D7Q9P0N9 293 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 CYP11B2P19099 503 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 PRKAR2BP31323 418 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 MATR3P43243 847 aaKnown RBP eCLIP7.09□□□□□ -1.27
LMO3-225ENST00000541295 SLFN5Q08AF3 891 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 RRP12Q5JTH9 1297 aaKnown RBP7.09□□□□□ -1.27
LMO3-225ENST00000541295 SFMBT2Q5VUG0 894 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 SPC24Q8NBT2 197 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 BARX2Q9UMQ3 279 aaPredicted RBP7.09□□□□□ -1.27
LMO3-225ENST00000541295 TMEM98Q9Y2Y6 226 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 MED14O60244 1454 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 KIF20BQ96Q89 1820 aa7.09□□□□□ -1.27
LMO3-225ENST00000541295 NKTRP30414 1462 aaKnown RBP7.09□□□□□ -1.28
LMO3-225ENST00000541295 CFAP58Q5T655 872 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 PROSER2Q86WR7 435 aaPredicted RBP7.08□□□□□ -1.28
LMO3-225ENST00000541295 PARP9Q8IXQ6 854 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 ATP11CQ8NB49 1132 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 IL17RAQ96F46 866 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 SPACA7Q96KW9 195 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 MAP3K14Q99558 947 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 BCL2L13Q9BXK5 485 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 GINM1Q9NU53 330 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 CPSF1Q10570 1443 aaKnown RBP7.08□□□□□ -1.28
LMO3-225ENST00000541295 CDC42BPGQ6DT37 1551 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 INSRP06213 1382 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 ADAMTSL3P82987 1691 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 PPP2R5BQ15173 497 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 ESCO1Q5FWF5 840 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 KIAA1958Q8N8K9 716 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 SLC43A3Q8NBI5 491 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 FLCNQ8NFG4 579 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 HDAC7Q8WUI4 952 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 GPCPD1Q9NPB8 672 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 SEPT10Q9P0V9 454 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 SHPRHQ149N8 1683 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 PRC1O43663 620 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 RLBP1P12271 317 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 NLRP6P59044 892 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 TOMM20Q15388 145 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 TTC39BQ5VTQ0 682 aaPredicted RBP7.08□□□□□ -1.28
LMO3-225ENST00000541295 ARMC3Q5W041 872 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 STAG1Q8WVM7 1258 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 ACAD8Q9UKU7 415 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 ZNF521Q96K83 1311 aa7.08□□□□□ -1.28
LMO3-225ENST00000541295 SETD1BQ9UPS6 1966 aaKnown RBP7.08□□□□□ -1.28
LMO3-225ENST00000541295 A0A1B0GUA9 196 aa7.07□□□□□ -1.28
LMO3-225ENST00000541295 CARNS1A5YM72 827 aa7.07□□□□□ -1.28
LMO3-225ENST00000541295 SLC27A2O14975 620 aa7.07□□□□□ -1.28
LMO3-225ENST00000541295 ZSCAN9O15535 394 aaPredicted RBP7.07□□□□□ -1.28
LMO3-225ENST00000541295 AP1G2O75843 785 aa7.07□□□□□ -1.28
LMO3-225ENST00000541295 PECAM1P16284 738 aaPredicted RBP7.07□□□□□ -1.28
LMO3-225ENST00000541295 INPP5BP32019 993 aa7.07□□□□□ -1.28
LMO3-225ENST00000541295 KIF11P52732 1056 aa7.07□□□□□ -1.28
LMO3-225ENST00000541295 KBTBD12Q3ZCT8 623 aa7.07□□□□□ -1.28
LMO3-225ENST00000541295 C20orf194Q5TEA3 1177 aa7.07□□□□□ -1.28
LMO3-225ENST00000541295 ZNF512BQ96KM6 892 aaPredicted RBP7.07□□□□□ -1.28
LMO3-225ENST00000541295 CRBNQ96SW2 442 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms