RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 ELP3Q9H9T3 547 aa9.3□□□□□ -0.92
YBX3-209ENST00000540747 GRM8O00222 908 aa9.29□□□□□ -0.92
YBX3-209ENST00000540747 MFSD14BQ5SR56 506 aa9.29□□□□□ -0.92
YBX3-209ENST00000540747 LDHAL6AQ6ZMR3 332 aa9.29□□□□□ -0.92
YBX3-209ENST00000540747 FAM43AQ8N2R8 423 aa9.29□□□□□ -0.92
YBX3-209ENST00000540747 TMEM39BQ9GZU3 492 aa9.29□□□□□ -0.92
YBX3-209ENST00000540747 TDRD3Q9H7E2 651 aaKnown RBP9.29□□□□□ -0.92
YBX3-209ENST00000540747 TTF2Q9UNY4 1162 aaKnown RBP9.29□□□□□ -0.92
YBX3-209ENST00000540747 PTCH2Q9Y6C5 1203 aa9.29□□□□□ -0.92
YBX3-209ENST00000540747 UTYO14607 1347 aa9.29□□□□□ -0.92
YBX3-209ENST00000540747 SPDYE5A6NIY4 337 aa9.28□□□□□ -0.92
YBX3-209ENST00000540747 ALDH1L1O75891 902 aa9.28□□□□□ -0.92
YBX3-209ENST00000540747 CRKP46108 304 aa9.28□□□□□ -0.92
YBX3-209ENST00000540747 GYG1P46976 350 aa9.28□□□□□ -0.92
YBX3-209ENST00000540747 GTF2A2P52657 109 aa9.28□□□□□ -0.92
YBX3-209ENST00000540747 MAP3K9P80192 1104 aa9.28□□□□□ -0.92
YBX3-209ENST00000540747 HDLBPQ00341 1268 aaKnown RBP9.28□□□□□ -0.92
YBX3-209ENST00000540747 EXOSC9Q06265 439 aaKnown RBP9.28□□□□□ -0.92
YBX3-209ENST00000540747 FBXO33Q7Z6M2 555 aa9.28□□□□□ -0.92
YBX3-209ENST00000540747 WDR63Q8IWG1 891 aa9.28□□□□□ -0.92
YBX3-209ENST00000540747 VGLL2Q8N8G2 317 aa9.28□□□□□ -0.92
YBX3-209ENST00000540747 PUS3Q9BZE2 481 aaKnown RBP9.28□□□□□ -0.92
YBX3-209ENST00000540747 ZCCHC17Q9NP64 241 aaKnown RBP9.28□□□□□ -0.92
YBX3-209ENST00000540747 SPINK5Q9NQ38 1064 aaPredicted RBP9.28□□□□□ -0.92
YBX3-209ENST00000540747 RIPOR2Q9Y4F9 1068 aa9.28□□□□□ -0.92
YBX3-209ENST00000540747 SNCAIPQ9Y6H5 919 aa9.28□□□□□ -0.92
YBX3-209ENST00000540747 RPAP1Q9BWH6 1393 aaPredicted RBP9.27□□□□□ -0.93
YBX3-209ENST00000540747 ZSWIM8A7E2V4 1837 aa9.27□□□□□ -0.93
YBX3-209ENST00000540747 CCL15-CCL14A0A0B4J2E2 113 aa9.27□□□□□ -0.93
YBX3-209ENST00000540747 HIBADHP31937 336 aaKnown RBP9.27□□□□□ -0.93
YBX3-209ENST00000540747 RBM5P52756 815 aaKnown RBP eCLIP9.27□□□□□ -0.93
YBX3-209ENST00000540747 TAF1CQ15572 869 aaPredicted RBP9.27□□□□□ -0.93
YBX3-209ENST00000540747 CCL15Q16663 113 aa9.27□□□□□ -0.93
YBX3-209ENST00000540747 CCDC57Q2TAC2 916 aa9.27□□□□□ -0.93
YBX3-209ENST00000540747 RABL6Q3YEC7 729 aaPredicted RBP9.27□□□□□ -0.93
YBX3-209ENST00000540747 FKBP1CQ5VVH2 108 aa9.27□□□□□ -0.93
YBX3-209ENST00000540747 SUCLG2Q96I99 432 aa9.27□□□□□ -0.93
YBX3-209ENST00000540747 MRIQ9BWK5 157 aa9.27□□□□□ -0.93
YBX3-209ENST00000540747 CNNM1Q9NRU3 951 aa9.27□□□□□ -0.93
YBX3-209ENST00000540747 CHMP3Q9Y3E7 222 aa9.27□□□□□ -0.93
YBX3-209ENST00000540747 ADGRA2Q96PE1 1338 aa9.27□□□□□ -0.93
YBX3-209ENST00000540747 TCP10L2B9ZVM9 353 aa9.26□□□□□ -0.93
YBX3-209ENST00000540747 TLR2O60603 784 aa9.26□□□□□ -0.93
YBX3-209ENST00000540747 APOBEC3HQ6NTF7 200 aaKnown RBP9.26□□□□□ -0.93
YBX3-209ENST00000540747 ANKRD44Q8N8A2 993 aa9.26□□□□□ -0.93
YBX3-209ENST00000540747 OTUD5Q96G74 571 aa9.26□□□□□ -0.93
YBX3-209ENST00000540747 ZDHHC15Q96MV8 337 aa9.26□□□□□ -0.93
YBX3-209ENST00000540747 ARHGAP39Q9C0H5 1083 aa9.26□□□□□ -0.93
YBX3-209ENST00000540747 ZFYVE28Q9HCC9 887 aa9.26□□□□□ -0.93
YBX3-209ENST00000540747 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.26□□□□□ -0.93
YBX3-209ENST00000540747 LAMA3Q16787 3333 aa9.26□□□□□ -0.93
YBX3-209ENST00000540747 BTBD19C9JJ37 291 aa9.25□□□□□ -0.93
YBX3-209ENST00000540747 IRF6O14896 467 aa9.25□□□□□ -0.93
YBX3-209ENST00000540747 PLIN1O60240 522 aa9.25□□□□□ -0.93
YBX3-209ENST00000540747 NBPF7P0C2Y1 421 aaPredicted RBP9.25□□□□□ -0.93
YBX3-209ENST00000540747 CTGFP29279 349 aa9.25□□□□□ -0.93
YBX3-209ENST00000540747 LACTBP83111 547 aaPredicted RBP9.25□□□□□ -0.93
YBX3-209ENST00000540747 PPIL2Q13356 520 aa9.25□□□□□ -0.93
YBX3-209ENST00000540747 MOGSQ13724 837 aa9.25□□□□□ -0.93
YBX3-209ENST00000540747 SLC9C1Q4G0N8 1177 aa9.25□□□□□ -0.93
YBX3-209ENST00000540747 UBE2Q1Q7Z7E8 422 aa9.25□□□□□ -0.93
YBX3-209ENST00000540747 FAM83AQ86UY5 434 aa9.25□□□□□ -0.93
YBX3-209ENST00000540747 ERO1BQ86YB8 467 aa9.25□□□□□ -0.93
YBX3-209ENST00000540747 SHISA4Q96DD7 197 aa9.25□□□□□ -0.93
YBX3-209ENST00000540747 COLQQ9Y215 455 aaPredicted RBP9.25□□□□□ -0.93
YBX3-209ENST00000540747 CSADQ9Y600 493 aa9.25□□□□□ -0.93
YBX3-209ENST00000540747 MROH5Q6ZUA9 1318 aa9.25□□□□□ -0.93
YBX3-209ENST00000540747 KIF16BQ96L93 1317 aa9.25□□□□□ -0.93
YBX3-209ENST00000540747 A0A0C4DFX4 3053 aa9.25□□□□□ -0.93
YBX3-209ENST00000540747 CUL9Q8IWT3 2517 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 GNRH1P01148 92 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 CETPP11597 493 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 FGFR2P21802 821 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 TNNI2P48788 182 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 CACNB3P54284 484 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 ARHGEF6Q15052 776 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 LRRC24Q50LG9 513 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 TAF7LQ5H9L4 462 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 C17orf99Q6UX52 265 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 TBC1D22AQ8WUA7 517 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 TMEM106CQ9BVX2 250 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 SRCIN1Q9C0H9 1055 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 ZNF112Q9UJU3 913 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 KCNH4Q9UQ05 1017 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 SUGT1Q9Y2Z0 365 aa9.24□□□□□ -0.93
YBX3-209ENST00000540747 H0YGN5 161 aa9.23□□□□□ -0.93
YBX3-209ENST00000540747 PDE8BO95263 885 aa9.23□□□□□ -0.93
YBX3-209ENST00000540747 PRMT2P55345 433 aa9.23□□□□□ -0.93
YBX3-209ENST00000540747 SNAPC2Q13487 334 aa9.23□□□□□ -0.93
YBX3-209ENST00000540747 HHIPL2Q6UWX4 724 aa9.23□□□□□ -0.93
YBX3-209ENST00000540747 NBPF11Q86T75 865 aa9.23□□□□□ -0.93
YBX3-209ENST00000540747 SH3TC2Q8TF17 1288 aa9.23□□□□□ -0.93
YBX3-209ENST00000540747 ZKSCAN4Q969J2 545 aaPredicted RBP9.23□□□□□ -0.93
YBX3-209ENST00000540747 TEKT1Q969V4 418 aa9.23□□□□□ -0.93
YBX3-209ENST00000540747 WRNIP1Q96S55 665 aa9.23□□□□□ -0.93
YBX3-209ENST00000540747 PRO3102Q9H379 93 aa9.23□□□□□ -0.93
YBX3-209ENST00000540747 BICC1Q9H694 974 aaKnown RBP9.23□□□□□ -0.93
YBX3-209ENST00000540747 C9orf78Q9NZ63 289 aaPredicted RBP9.23□□□□□ -0.93
YBX3-209ENST00000540747 IQSEC3Q9UPP2 1182 aaPredicted RBP9.23□□□□□ -0.93
YBX3-209ENST00000540747 ZNF521Q96K83 1311 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms