RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 FRAT1Q92837 279 aaPredicted RBP12.89□□□□□ -0.35
CDCA3-208ENST00000540683 VEZTQ9HBM0 779 aa12.89□□□□□ -0.35
CDCA3-208ENST00000540683 ASTN2O75129 1339 aaPredicted RBP12.88□□□□□ -0.35
CDCA3-208ENST00000540683 SNAP23O00161 211 aa12.88□□□□□ -0.35
CDCA3-208ENST00000540683 GNAI2P04899 355 aa12.88□□□□□ -0.35
CDCA3-208ENST00000540683 MTX1Q13505 466 aa12.88□□□□□ -0.35
CDCA3-208ENST00000540683 ATP2B3Q16720 1220 aa12.88□□□□□ -0.35
CDCA3-208ENST00000540683 OTUD7BQ6GQQ9 843 aa12.88□□□□□ -0.35
CDCA3-208ENST00000540683 RASAL3Q86YV0 1011 aa12.88□□□□□ -0.35
CDCA3-208ENST00000540683 SLC10A4Q96EP9 437 aa12.88□□□□□ -0.35
CDCA3-208ENST00000540683 COPRSQ9NQ92 184 aa12.88□□□□□ -0.35
CDCA3-208ENST00000540683 DENND2AQ9ULE3 1009 aa12.88□□□□□ -0.35
CDCA3-208ENST00000540683 LRRFIP2Q9Y608 721 aaKnown RBP12.88□□□□□ -0.35
CDCA3-208ENST00000540683 ZBTB48P10074 688 aaPredicted RBP12.87□□□□□ -0.35
CDCA3-208ENST00000540683 FGFR2P21802 821 aa12.87□□□□□ -0.35
CDCA3-208ENST00000540683 CRKP46108 304 aa12.87□□□□□ -0.35
CDCA3-208ENST00000540683 RFX5P48382 616 aaPredicted RBP12.87□□□□□ -0.35
CDCA3-208ENST00000540683 CHAF1AQ13111 956 aaPredicted RBP12.87□□□□□ -0.35
CDCA3-208ENST00000540683 MAP3K11Q16584 847 aa12.87□□□□□ -0.35
CDCA3-208ENST00000540683 SPDYE2Q495Y8 402 aa12.87□□□□□ -0.35
CDCA3-208ENST00000540683 FKBP1CQ5VVH2 108 aa12.87□□□□□ -0.35
CDCA3-208ENST00000540683 SPTY2D1Q68D10 685 aaPredicted RBP12.87□□□□□ -0.35
CDCA3-208ENST00000540683 HHIPL2Q6UWX4 724 aa12.87□□□□□ -0.35
CDCA3-208ENST00000540683 DZIP1LQ8IYY4 767 aaKnown RBP12.87□□□□□ -0.35
CDCA3-208ENST00000540683 CHMP4BQ9H444 224 aaKnown RBP12.87□□□□□ -0.35
CDCA3-208ENST00000540683 ANGEL1Q9UNK9 670 aaKnown RBP12.87□□□□□ -0.35
CDCA3-208ENST00000540683 ZBED9Q6R2W3 1325 aa12.87□□□□□ -0.35
CDCA3-208ENST00000540683 MYH13Q9UKX3 1938 aa12.86□□□□□ -0.35
CDCA3-208ENST00000540683 MANSC4A6NHS7 340 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-208ENST00000540683 UBE2Q2LH0YL09 131 aa12.86□□□□□ -0.35
CDCA3-208ENST00000540683 SRGAP3O43295 1099 aa12.86□□□□□ -0.35
CDCA3-208ENST00000540683 WDHD1O75717 1129 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-208ENST00000540683 MVPQ14764 893 aaKnown RBP12.86□□□□□ -0.35
CDCA3-208ENST00000540683 ANKRD13AQ8IZ07 590 aa12.86□□□□□ -0.35
CDCA3-208ENST00000540683 MIER1Q8N108 512 aa12.86□□□□□ -0.35
CDCA3-208ENST00000540683 PRMT6Q96LA8 375 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-208ENST00000540683 ZDHHC15Q96MV8 337 aa12.86□□□□□ -0.35
CDCA3-208ENST00000540683 ZNF70Q9UC06 446 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-208ENST00000540683 PDS5AQ29RF7 1337 aaKnown RBP12.86□□□□□ -0.35
CDCA3-208ENST00000540683 CLRN2A0PK11 232 aa12.85□□□□□ -0.35
CDCA3-208ENST00000540683 IGSF3O75054 1194 aa12.85□□□□□ -0.35
CDCA3-208ENST00000540683 TRIM27P14373 513 aa12.85□□□□□ -0.35
CDCA3-208ENST00000540683 TM4SF4P48230 202 aa12.85□□□□□ -0.35
CDCA3-208ENST00000540683 BCAMP50895 628 aa12.85□□□□□ -0.35
CDCA3-208ENST00000540683 RASA3Q14644 834 aa12.85□□□□□ -0.35
CDCA3-208ENST00000540683 NOM1Q5C9Z4 860 aaKnown RBP12.85□□□□□ -0.35
CDCA3-208ENST00000540683 LDLRAD1Q5T700 205 aa12.85□□□□□ -0.35
CDCA3-208ENST00000540683 FAM83AQ86UY5 434 aa12.85□□□□□ -0.35
CDCA3-208ENST00000540683 KLHDC4Q8TBB5 520 aa12.85□□□□□ -0.35
CDCA3-208ENST00000540683 CSRNP1Q96S65 589 aa12.85□□□□□ -0.35
CDCA3-208ENST00000540683 MEIS3Q99687 375 aa12.85□□□□□ -0.35
CDCA3-208ENST00000540683 SIL1Q9H173 461 aa12.85□□□□□ -0.35
CDCA3-208ENST00000540683 RNF186Q9NXI6 227 aa12.85□□□□□ -0.35
CDCA3-208ENST00000540683 SALL1Q9NSC2 1324 aa12.85□□□□□ -0.35
CDCA3-208ENST00000540683 TRPA1O75762 1119 aa12.84□□□□□ -0.35
CDCA3-208ENST00000540683 LDHBP07195 334 aaKnown RBP12.84□□□□□ -0.35
CDCA3-208ENST00000540683 G3BP1Q13283 466 aaKnown RBP eCLIP12.84□□□□□ -0.35
CDCA3-208ENST00000540683 PKN2Q16513 984 aaKnown RBP12.84□□□□□ -0.35
CDCA3-208ENST00000540683 GORABQ5T7V8 394 aa12.84□□□□□ -0.35
CDCA3-208ENST00000540683 DCAF15Q66K64 600 aa12.84□□□□□ -0.35
CDCA3-208ENST00000540683 DLK2Q6UY11 383 aa12.84□□□□□ -0.35
CDCA3-208ENST00000540683 ATG9AQ7Z3C6 839 aa12.84□□□□□ -0.35
CDCA3-208ENST00000540683 JAG2Q9Y219 1238 aa12.84□□□□□ -0.35
CDCA3-208ENST00000540683 CSADQ9Y600 493 aa12.84□□□□□ -0.35
CDCA3-208ENST00000540683 PRAMEF18Q5VWM3 479 aa12.83□□□□□ -0.36
CDCA3-208ENST00000540683 TDRD3Q9H7E2 651 aaKnown RBP12.83□□□□□ -0.36
CDCA3-208ENST00000540683 IQSEC3Q9UPP2 1182 aaPredicted RBP12.83□□□□□ -0.36
CDCA3-208ENST00000540683 CAPN15O75808 1086 aa12.82□□□□□ -0.36
CDCA3-208ENST00000540683 MAP4K4O95819 1239 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-208ENST00000540683 ARHGEF6Q15052 776 aa12.82□□□□□ -0.36
CDCA3-208ENST00000540683 SPRYD7Q5W111 196 aa12.82□□□□□ -0.36
CDCA3-208ENST00000540683 CFHR5Q9BXR6 569 aa12.82□□□□□ -0.36
CDCA3-208ENST00000540683 RPAP1Q9BWH6 1393 aaPredicted RBP12.81□□□□□ -0.36
CDCA3-208ENST00000540683 BCAR3O75815 825 aa12.81□□□□□ -0.36
CDCA3-208ENST00000540683 GSTO1P78417 241 aa12.81□□□□□ -0.36
CDCA3-208ENST00000540683 PRKG1Q13976 671 aa12.81□□□□□ -0.36
CDCA3-208ENST00000540683 DZIP1Q86YF9 867 aaKnown RBP12.81□□□□□ -0.36
CDCA3-208ENST00000540683 ABHD8Q96I13 439 aa12.81□□□□□ -0.36
CDCA3-208ENST00000540683 TSKSQ9UJT2 592 aa12.81□□□□□ -0.36
CDCA3-208ENST00000540683 A0A1B0GUL7 405 aa12.8□□□□□ -0.36
CDCA3-208ENST00000540683 TCP10L2B9ZVM9 353 aa12.8□□□□□ -0.36
CDCA3-208ENST00000540683 LDHCP07864 332 aa12.8□□□□□ -0.36
CDCA3-208ENST00000540683 UQCRFS1P1P0C7P4 283 aa12.8□□□□□ -0.36
CDCA3-208ENST00000540683 MAP3K9P80192 1104 aa12.8□□□□□ -0.36
CDCA3-208ENST00000540683 OS9Q13438 667 aaPredicted RBP12.8□□□□□ -0.36
CDCA3-208ENST00000540683 DGKZQ13574 1117 aa12.8□□□□□ -0.36
CDCA3-208ENST00000540683 HSP90AB4PQ58FF6 505 aa12.8□□□□□ -0.36
CDCA3-208ENST00000540683 NBPF12Q5TAG4 269 aaPredicted RBP12.8□□□□□ -0.36
CDCA3-208ENST00000540683 CCDC102BQ68D86 513 aa12.8□□□□□ -0.36
CDCA3-208ENST00000540683 CTU1Q7Z7A3 348 aaKnown RBP12.8□□□□□ -0.36
CDCA3-208ENST00000540683 ITPRIPQ8IWB1 547 aa12.8□□□□□ -0.36
CDCA3-208ENST00000540683 CLUAP1Q96AJ1 413 aa12.8□□□□□ -0.36
CDCA3-208ENST00000540683 SCAF8Q9UPN6 1271 aaKnown RBP12.8□□□□□ -0.36
CDCA3-208ENST00000540683 GTF2A2P52657 109 aa12.79□□□□□ -0.36
CDCA3-208ENST00000540683 TMED8Q6PL24 325 aaPredicted RBP12.79□□□□□ -0.36
CDCA3-208ENST00000540683 MOB2Q70IA6 237 aa12.79□□□□□ -0.36
CDCA3-208ENST00000540683 ERC1Q8IUD2 1116 aa12.79□□□□□ -0.36
CDCA3-208ENST00000540683 FAM151AQ8WW52 585 aa12.79□□□□□ -0.36
CDCA3-208ENST00000540683 WNK4Q96J92 1243 aa12.79□□□□□ -0.36
CDCA3-208ENST00000540683 NEUROD6Q96NK8 337 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms