RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 FILIP1Q7Z7B0 1213 aa17.63■□□□□ 0.41
GABARAPL1-208ENST00000540424 LOC102724159A0A0B4J2E5 919 aa17.62■□□□□ 0.41
GABARAPL1-208ENST00000540424 PWP2Q15269 919 aaKnown RBP17.62■□□□□ 0.41
GABARAPL1-208ENST00000540424 ERCC6LQ2NKX8 1250 aa17.62■□□□□ 0.41
GABARAPL1-208ENST00000540424 SRLQ86TD4 932 aa17.62■□□□□ 0.41
GABARAPL1-208ENST00000540424 CCAR2Q8N163 923 aaKnown RBP17.62■□□□□ 0.41
GABARAPL1-208ENST00000540424 GOLGA5Q8TBA6 731 aa17.62■□□□□ 0.41
GABARAPL1-208ENST00000540424 BTG4Q9NY30 223 aa17.62■□□□□ 0.41
GABARAPL1-208ENST00000540424 ASAP1Q9ULH1 1129 aa17.62■□□□□ 0.41
GABARAPL1-208ENST00000540424 TRIM66O15016 1216 aa17.61■□□□□ 0.41
GABARAPL1-208ENST00000540424 SARM1Q6SZW1 724 aa17.61■□□□□ 0.41
GABARAPL1-208ENST00000540424 TMCO3Q6UWJ1 677 aa17.61■□□□□ 0.41
GABARAPL1-208ENST00000540424 RBM43Q6ZSC3 357 aaKnown RBP17.61■□□□□ 0.41
GABARAPL1-208ENST00000540424 IQUBQ8NA54 791 aa17.61■□□□□ 0.41
GABARAPL1-208ENST00000540424 FBXO18Q8NFZ0 1043 aa17.61■□□□□ 0.41
GABARAPL1-208ENST00000540424 SMARCE1Q969G3 411 aa17.61■□□□□ 0.41
GABARAPL1-208ENST00000540424 PUS3Q9BZE2 481 aaKnown RBP17.61■□□□□ 0.41
GABARAPL1-208ENST00000540424 CAVIN2O95810 425 aa17.61■□□□□ 0.41
GABARAPL1-208ENST00000540424 HSPD1P10809 573 aaKnown RBP17.61■□□□□ 0.41
GABARAPL1-208ENST00000540424 ZSCAN16Q9H4T2 348 aaPredicted RBP17.61■□□□□ 0.41
GABARAPL1-208ENST00000540424 MAST3O60307 1309 aa17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 GOLGA6L4A6NEF3 574 aa17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 H3BQV1 296 aa17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 PFKFB2O60825 505 aa17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 SKILP12757 684 aa17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 COL9A3Q14050 684 aaPredicted RBP17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 CCDC93Q567U6 631 aa17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 IFFO2Q5TF58 517 aa17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 ILDR1Q86SU0 546 aaPredicted RBP17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 BRF1Q92994 677 aa17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 XAGE2Q96GT9 111 aa17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 MRFAP1L1Q96HT8 127 aa17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 PSD3Q9NYI0 1048 aa17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 LCMT1Q9UIC8 334 aa17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 FKBP4Q02790 459 aaKnown RBP eCLIP17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 FAM89AQ96GI7 184 aa17.6■□□□□ 0.41
GABARAPL1-208ENST00000540424 POLR3GO15318 223 aaPredicted RBP17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 TUBB4AP04350 444 aa17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 CHGBP05060 677 aa17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 NOM1Q5C9Z4 860 aaKnown RBP17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 FERMT3Q86UX7 667 aa17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 TNMDQ9H2S6 317 aa17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 LRP6O75581 1613 aa17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 ST5P78524 1137 aa17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 CCZ1BP86790 482 aa17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 CCZ1P86791 482 aaPredicted RBP17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 SMARCC2Q8TAQ2 1214 aa17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 SPATA32Q96LK8 384 aa17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 AK7Q96M32 723 aa17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 AGXT2Q9BYV1 514 aa17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 TMX1Q9H3N1 280 aa17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 RRP15Q9Y3B9 282 aaKnown RBP17.59■□□□□ 0.41
GABARAPL1-208ENST00000540424 E7EWF7 191 aa17.58■□□□□ 0.41
GABARAPL1-208ENST00000540424 EXOSC10Q01780 885 aaKnown RBP17.58■□□□□ 0.41
GABARAPL1-208ENST00000540424 STOX1Q6ZVD7 989 aa17.58■□□□□ 0.41
GABARAPL1-208ENST00000540424 TTC6Q86TZ1 520 aa17.58■□□□□ 0.41
GABARAPL1-208ENST00000540424 ZNF622Q969S3 477 aaKnown RBP eCLIP17.58■□□□□ 0.41
GABARAPL1-208ENST00000540424 DDX19AQ9NUU7 478 aaKnown RBP17.58■□□□□ 0.41
GABARAPL1-208ENST00000540424 DISP2A7MBM2 1401 aa17.58■□□□□ 0.4
GABARAPL1-208ENST00000540424 COL14A1Q05707 1796 aaKnown RBP17.58■□□□□ 0.4
GABARAPL1-208ENST00000540424 GYS2P54840 703 aa17.58■□□□□ 0.4
GABARAPL1-208ENST00000540424 ARHGAP29Q52LW3 1261 aa17.58■□□□□ 0.4
GABARAPL1-208ENST00000540424 NLRP10Q86W26 655 aa17.58■□□□□ 0.4
GABARAPL1-208ENST00000540424 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.58■□□□□ 0.4
GABARAPL1-208ENST00000540424 CFAP45Q9UL16 551 aa17.58■□□□□ 0.4
GABARAPL1-208ENST00000540424 BCL9O00512 1426 aa17.58■□□□□ 0.4
GABARAPL1-208ENST00000540424 ANKRD18BA2A2Z9 1011 aa17.57■□□□□ 0.4
GABARAPL1-208ENST00000540424 NPHP1O15259 732 aa17.57■□□□□ 0.4
GABARAPL1-208ENST00000540424 ZNF165P49910 485 aa17.57■□□□□ 0.4
GABARAPL1-208ENST00000540424 SCRN1Q12765 414 aa17.57■□□□□ 0.4
GABARAPL1-208ENST00000540424 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.57■□□□□ 0.4
GABARAPL1-208ENST00000540424 EXOC5O00471 708 aa17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 JAK2O60674 1132 aa17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 CYP19A1P11511 503 aaPredicted RBP17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 IMMTQ16891 758 aaKnown RBP17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 WASHC4Q2M389 1173 aa17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 METTL24Q5JXM2 366 aa17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 NAA16Q6N069 864 aaPredicted RBP17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 FBXL16Q8N461 479 aa17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 ZNF274Q96GC6 653 aaPredicted RBP17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 JRKLQ9Y4A0 524 aa17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 CCDC69A6NI79 296 aa17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 ERVV-1B6SEH8 477 aa17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 APPP05067 770 aa17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 LIG1P18858 919 aa17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 CAMK4Q16566 473 aa17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 LDHAL6AQ6ZMR3 332 aa17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 APPBP2Q92624 585 aa17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 EXOC4Q96A65 974 aa17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 CLSTN2Q9H4D0 955 aa17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 ORC3Q9UBD5 711 aaPredicted RBP17.56■□□□□ 0.4
GABARAPL1-208ENST00000540424 M0R2C6 588 aa17.55■□□□□ 0.4
GABARAPL1-208ENST00000540424 OAS2P29728 719 aaKnown RBP17.55■□□□□ 0.4
GABARAPL1-208ENST00000540424 CTSWP56202 376 aa17.55■□□□□ 0.4
GABARAPL1-208ENST00000540424 SNW1Q13573 536 aaKnown RBP17.55■□□□□ 0.4
GABARAPL1-208ENST00000540424 ZNF512BQ96KM6 892 aaPredicted RBP17.55■□□□□ 0.4
GABARAPL1-208ENST00000540424 DTNBO60941 627 aa17.55■□□□□ 0.4
GABARAPL1-208ENST00000540424 TPM1P09493 284 aa17.55■□□□□ 0.4
GABARAPL1-208ENST00000540424 ITGA6P23229 1130 aa17.55■□□□□ 0.4
GABARAPL1-208ENST00000540424 ADORA1P30542 326 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms