RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 PAPPA2Q9BXP8 1791 aa18.62■□□□□ 0.57
UBE3B-212ENST00000540230 OS9Q13438 667 aaPredicted RBP18.61■□□□□ 0.57
UBE3B-212ENST00000540230 SIRT2Q8IXJ6 389 aa18.61■□□□□ 0.57
UBE3B-212ENST00000540230 C2orf69Q8N8R5 385 aa18.61■□□□□ 0.57
UBE3B-212ENST00000540230 VEZTQ9HBM0 779 aa18.61■□□□□ 0.57
UBE3B-212ENST00000540230 GNL3LQ9NVN8 582 aaKnown RBP18.61■□□□□ 0.57
UBE3B-212ENST00000540230 EXOC6BQ9Y2D4 811 aa18.61■□□□□ 0.57
UBE3B-212ENST00000540230 AOC2O75106 756 aa18.6■□□□□ 0.57
UBE3B-212ENST00000540230 SPDYE2Q495Y8 402 aa18.6■□□□□ 0.57
UBE3B-212ENST00000540230 TNNI3KQ59H18 835 aa18.6■□□□□ 0.57
UBE3B-212ENST00000540230 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.6■□□□□ 0.57
UBE3B-212ENST00000540230 HHIPL1Q96JK4 782 aa18.6■□□□□ 0.57
UBE3B-212ENST00000540230 DEFB129Q9H1M3 183 aa18.6■□□□□ 0.57
UBE3B-212ENST00000540230 DENND2AQ9ULE3 1009 aa18.6■□□□□ 0.57
UBE3B-212ENST00000540230 FPGT-TNNI3KV9GXZ4 949 aa18.6■□□□□ 0.57
UBE3B-212ENST00000540230 SSC5DA1L4H1 1573 aa18.6■□□□□ 0.57
UBE3B-212ENST00000540230 SEMA3EO15041 775 aa18.59■□□□□ 0.57
UBE3B-212ENST00000540230 MYO1BO43795 1136 aa18.59■□□□□ 0.57
UBE3B-212ENST00000540230 PI16Q6UXB8 463 aa18.59■□□□□ 0.57
UBE3B-212ENST00000540230 ZNF70Q9UC06 446 aaPredicted RBP18.59■□□□□ 0.57
UBE3B-212ENST00000540230 FZD1Q9UP38 647 aa18.59■□□□□ 0.57
UBE3B-212ENST00000540230 SUGT1Q9Y2Z0 365 aa18.59■□□□□ 0.57
UBE3B-212ENST00000540230 ZBTB22O15209 634 aa18.59■□□□□ 0.57
UBE3B-212ENST00000540230 HDLBPQ00341 1268 aaKnown RBP18.59■□□□□ 0.57
UBE3B-212ENST00000540230 DIXDC1Q155Q3 683 aa18.59■□□□□ 0.57
UBE3B-212ENST00000540230 TEKT1Q969V4 418 aa18.59■□□□□ 0.57
UBE3B-212ENST00000540230 DBNDD2Q9BQY9 259 aa18.59■□□□□ 0.57
UBE3B-212ENST00000540230 GPR108Q9NPR9 543 aa18.59■□□□□ 0.57
UBE3B-212ENST00000540230 SALL1Q9NSC2 1324 aa18.58■□□□□ 0.57
UBE3B-212ENST00000540230 ECE1P42892 770 aa18.58■□□□□ 0.56
UBE3B-212ENST00000540230 APOBEC3HQ6NTF7 200 aaKnown RBP18.58■□□□□ 0.56
UBE3B-212ENST00000540230 ZIC5Q96T25 663 aa18.58■□□□□ 0.56
UBE3B-212ENST00000540230 TLR7Q9NYK1 1049 aaKnown RBP18.58■□□□□ 0.56
UBE3B-212ENST00000540230 HMG20BQ9P0W2 317 aa18.58■□□□□ 0.56
UBE3B-212ENST00000540230 ARID4AP29374 1257 aaPredicted RBP18.57■□□□□ 0.56
UBE3B-212ENST00000540230 CACNB3P54284 484 aa18.57■□□□□ 0.56
UBE3B-212ENST00000540230 PRKG1Q13976 671 aa18.57■□□□□ 0.56
UBE3B-212ENST00000540230 RASA3Q14644 834 aa18.57■□□□□ 0.56
UBE3B-212ENST00000540230 RGMBQ6NW40 437 aa18.57■□□□□ 0.56
UBE3B-212ENST00000540230 CDAN1Q8IWY9 1227 aa18.57■□□□□ 0.56
UBE3B-212ENST00000540230 ZDHHC15Q96MV8 337 aa18.57■□□□□ 0.56
UBE3B-212ENST00000540230 MAST3O60307 1309 aa18.57■□□□□ 0.56
UBE3B-212ENST00000540230 AKAP11Q9UKA4 1901 aa18.56■□□□□ 0.56
UBE3B-212ENST00000540230 FAM155AB1AL88 458 aaPredicted RBP18.56■□□□□ 0.56
UBE3B-212ENST00000540230 TCP10L2B9ZVM9 353 aa18.56■□□□□ 0.56
UBE3B-212ENST00000540230 UBE2Q2LH0YL09 131 aa18.56■□□□□ 0.56
UBE3B-212ENST00000540230 LDHBP07195 334 aaKnown RBP18.56■□□□□ 0.56
UBE3B-212ENST00000540230 MCAMP43121 646 aa18.56■□□□□ 0.56
UBE3B-212ENST00000540230 GORABQ5T7V8 394 aa18.56■□□□□ 0.56
UBE3B-212ENST00000540230 RPAP2Q8IXW5 612 aaPredicted RBP18.56■□□□□ 0.56
UBE3B-212ENST00000540230 EAF2Q96CJ1 260 aaPredicted RBP18.56■□□□□ 0.56
UBE3B-212ENST00000540230 MRIQ9BWK5 157 aa18.56■□□□□ 0.56
UBE3B-212ENST00000540230 DBNLQ9UJU6 430 aaKnown RBP18.56■□□□□ 0.56
UBE3B-212ENST00000540230 DAGLAQ9Y4D2 1042 aa18.56■□□□□ 0.56
UBE3B-212ENST00000540230 PDS5AQ29RF7 1337 aaKnown RBP18.56■□□□□ 0.56
UBE3B-212ENST00000540230 MYH2Q9UKX2 1941 aa18.56■□□□□ 0.56
UBE3B-212ENST00000540230 RRP1P56182 461 aaKnown RBP18.55■□□□□ 0.56
UBE3B-212ENST00000540230 FKBP1BP68106 108 aa18.55■□□□□ 0.56
UBE3B-212ENST00000540230 NBPF12Q5TAG4 269 aaPredicted RBP18.55■□□□□ 0.56
UBE3B-212ENST00000540230 HHIPL2Q6UWX4 724 aa18.55■□□□□ 0.56
UBE3B-212ENST00000540230 CCDC8Q9H0W5 538 aaPredicted RBP18.55■□□□□ 0.56
UBE3B-212ENST00000540230 ABCF2Q9UG63 623 aa18.55■□□□□ 0.56
UBE3B-212ENST00000540230 ZNF157P51786 506 aaPredicted RBP18.54■□□□□ 0.56
UBE3B-212ENST00000540230 SPATA5Q8NB90 893 aa18.54■□□□□ 0.56
UBE3B-212ENST00000540230 WBP1LQ9NX94 342 aa18.54■□□□□ 0.56
UBE3B-212ENST00000540230 PPP2R3BQ9Y5P8 575 aa18.54■□□□□ 0.56
UBE3B-212ENST00000540230 FOXN1O15353 648 aa18.54■□□□□ 0.56
UBE3B-212ENST00000540230 NF2P35240 595 aa18.54■□□□□ 0.56
UBE3B-212ENST00000540230 TTLL12Q14166 644 aaPredicted RBP18.54■□□□□ 0.56
UBE3B-212ENST00000540230 TBC1D9Q6ZT07 1266 aa18.54■□□□□ 0.56
UBE3B-212ENST00000540230 ZNF384Q8TF68 577 aa18.54■□□□□ 0.56
UBE3B-212ENST00000540230 TEPSINQ96N21 525 aa18.54■□□□□ 0.56
UBE3B-212ENST00000540230 TMEM39BQ9GZU3 492 aa18.54■□□□□ 0.56
UBE3B-212ENST00000540230 IL1RAPL2Q9NP60 686 aa18.54■□□□□ 0.56
UBE3B-212ENST00000540230 MYO5AQ9Y4I1 1855 aaKnown RBP18.53■□□□□ 0.56
UBE3B-212ENST00000540230 APBB1O00213 710 aa18.53■□□□□ 0.56
UBE3B-212ENST00000540230 SLC10A3P09131 477 aa18.53■□□□□ 0.56
UBE3B-212ENST00000540230 RASAL3Q86YV0 1011 aa18.53■□□□□ 0.56
UBE3B-212ENST00000540230 RHPN1Q8TCX5 695 aa18.53■□□□□ 0.56
UBE3B-212ENST00000540230 SNRKQ9NRH2 765 aa18.53■□□□□ 0.56
UBE3B-212ENST00000540230 MAP2K2P36507 400 aa18.52■□□□□ 0.56
UBE3B-212ENST00000540230 TTC39AQ5SRH9 613 aa18.52■□□□□ 0.56
UBE3B-212ENST00000540230 ZGPATQ8N5A5 531 aaKnown RBP18.52■□□□□ 0.56
UBE3B-212ENST00000540230 CHMP4BQ9H444 224 aaKnown RBP18.52■□□□□ 0.56
UBE3B-212ENST00000540230 ANGEL1Q9UNK9 670 aaKnown RBP18.52■□□□□ 0.56
UBE3B-212ENST00000540230 OTOFQ9HC10 1997 aa18.51■□□□□ 0.55
UBE3B-212ENST00000540230 HMMRO75330 724 aa18.51■□□□□ 0.55
UBE3B-212ENST00000540230 UQCRFS1P1P0C7P4 283 aa18.51■□□□□ 0.55
UBE3B-212ENST00000540230 NOGQ13253 232 aa18.51■□□□□ 0.55
UBE3B-212ENST00000540230 TNFAIP1Q13829 316 aa18.51■□□□□ 0.55
UBE3B-212ENST00000540230 CDC42EP5Q6NZY7 148 aa18.51■□□□□ 0.55
UBE3B-212ENST00000540230 ERC1Q8IUD2 1116 aa18.51■□□□□ 0.55
UBE3B-212ENST00000540230 GAKO14976 1311 aa18.5■□□□□ 0.55
UBE3B-212ENST00000540230 MAP2K1Q02750 393 aaPredicted RBP18.5■□□□□ 0.55
UBE3B-212ENST00000540230 MECOMQ03112 1051 aa18.5■□□□□ 0.55
UBE3B-212ENST00000540230 CCDC158Q5M9N0 1113 aa18.5■□□□□ 0.55
UBE3B-212ENST00000540230 AACSQ86V21 672 aa18.5■□□□□ 0.55
UBE3B-212ENST00000540230 DZIP1Q86YF9 867 aaKnown RBP18.5■□□□□ 0.55
UBE3B-212ENST00000540230 NFIAQ12857 509 aa18.49■□□□□ 0.55
UBE3B-212ENST00000540230 HSP90AB4PQ58FF6 505 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms