RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 IL1RAPL2Q9NP60 686 aa8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 TLR7Q9NYK1 1049 aaKnown RBP8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 HACL1Q9UJ83 578 aa8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 DBNLQ9UJU6 430 aaKnown RBP8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 TRPM7Q96QT4 1865 aa8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 FOCADQ5VW36 1801 aa8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 POLR2AP24928 1970 aaKnown RBP8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 AK9Q5TCS8 1911 aa8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 PDS5AQ29RF7 1337 aaKnown RBP8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 SHTN1A0MZ66 631 aa8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 FAM205CA6NFA0 338 aa8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 APBB1O00213 710 aa8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 SEMA3EO15041 775 aa8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 ARID4AP29374 1257 aaPredicted RBP8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 EPHX2P34913 555 aa8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 TIE1P35590 1138 aa8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 EPS15P42566 896 aa8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 FKBP1AP62942 108 aaKnown RBP8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 RASGRF1Q13972 1273 aa8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 IER5LQ5T953 404 aa8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 MICALL2Q8IY33 904 aa8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 LRRCC1Q9C099 1032 aa8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 TAF1DQ9H5J8 278 aaPredicted RBP8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 JAG2Q9Y219 1238 aa8.58□□□□□ -1.04
LPCAT3-209ENST00000540060 FRAT2O75474 233 aaPredicted RBP8.57□□□□□ -1.04
LPCAT3-209ENST00000540060 ZNF280AP59817 542 aaPredicted RBP8.57□□□□□ -1.04
LPCAT3-209ENST00000540060 CHAF1AQ13111 956 aaPredicted RBP8.57□□□□□ -1.04
LPCAT3-209ENST00000540060 MFSD14BQ5SR56 506 aa8.57□□□□□ -1.04
LPCAT3-209ENST00000540060 AACSQ86V21 672 aa8.57□□□□□ -1.04
LPCAT3-209ENST00000540060 CLASRPQ8N2M8 674 aaKnown RBP8.57□□□□□ -1.04
LPCAT3-209ENST00000540060 CCDC8Q9H0W5 538 aaPredicted RBP8.57□□□□□ -1.04
LPCAT3-209ENST00000540060 ADARB2Q9NS39 739 aaKnown RBP8.57□□□□□ -1.04
LPCAT3-209ENST00000540060 GNL3LQ9NVN8 582 aaKnown RBP8.57□□□□□ -1.04
LPCAT3-209ENST00000540060 CNOT7Q9UIV1 285 aaKnown RBP8.57□□□□□ -1.04
LPCAT3-209ENST00000540060 DENND2AQ9ULE3 1009 aa8.57□□□□□ -1.04
LPCAT3-209ENST00000540060 SALL1Q9NSC2 1324 aa8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 SMARCA5O60264 1052 aaPredicted RBP8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 EGFRP00533 1210 aa8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 USP17L8P0C7I0 530 aa8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 MCAMP43121 646 aa8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 SCARF1Q14162 830 aa8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 GORABQ5T7V8 394 aa8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 PI16Q6UXB8 463 aa8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 USP50Q70EL3 339 aaPredicted RBP8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 PNMA8AQ86V59 439 aaPredicted RBP8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 KIAA0825Q8IV33 1275 aa8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 TRPM4Q8TD43 1214 aa8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 TBC1D22AQ8WUA7 517 aa8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 GCC1Q96CN9 775 aa8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 ZNF512BQ96KM6 892 aaPredicted RBP8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 HMG20BQ9P0W2 317 aa8.56□□□□□ -1.04
LPCAT3-209ENST00000540060 H7C1D1 291 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 TOMM70O94826 608 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 IGHDP01880 384 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 IFIT2P09913 472 aaKnown RBP8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 UQCRFS1P1P0C7P4 283 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 MMP14P50281 582 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 HIRAP54198 1017 aaPredicted RBP8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 GRIK5Q16478 980 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 KIF4BQ2VIQ3 1234 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 TBC1D10BQ4KMP7 808 aaPredicted RBP8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 EAPPQ56P03 285 aaPredicted RBP8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 CCDC158Q5M9N0 1113 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 TTC39AQ5SRH9 613 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 SAMD7Q7Z3H4 446 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 LDHDQ86WU2 507 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 SMC5Q8IY18 1101 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 C16orf71Q8IYS4 520 aaPredicted RBP8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 SPATA5Q8NB90 893 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 RBM46Q8TBY0 533 aaKnown RBP8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 WDR66Q8TBY9 1149 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 RWDD1Q9H446 243 aaPredicted RBP8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 MYOZ2Q9NPC6 264 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 PAPPA2Q9BXP8 1791 aa8.55□□□□□ -1.04
LPCAT3-209ENST00000540060 MAST3O60307 1309 aa8.54□□□□□ -1.04
LPCAT3-209ENST00000540060 SALL3Q9BXA9 1300 aa8.54□□□□□ -1.04
LPCAT3-209ENST00000540060 DDX60LQ5H9U9 1706 aaKnown RBP8.54□□□□□ -1.04
LPCAT3-209ENST00000540060 F8W031 263 aaPredicted RBP8.54□□□□□ -1.04
LPCAT3-209ENST00000540060 PRDX5P30044 214 aa8.54□□□□□ -1.04
LPCAT3-209ENST00000540060 OGFOD1Q8N543 542 aa8.54□□□□□ -1.04
LPCAT3-209ENST00000540060 ZBED3Q96IU2 234 aaPredicted RBP8.54□□□□□ -1.04
LPCAT3-209ENST00000540060 HDAC9Q9UKV0 1011 aa8.54□□□□□ -1.04
LPCAT3-209ENST00000540060 TTF2Q9UNY4 1162 aaKnown RBP8.54□□□□□ -1.04
LPCAT3-209ENST00000540060 SUGT1Q9Y2Z0 365 aa8.54□□□□□ -1.04
LPCAT3-209ENST00000540060 OTOFQ9HC10 1997 aa8.53□□□□□ -1.04
LPCAT3-209ENST00000540060 NAV1Q8NEY1 1877 aa8.53□□□□□ -1.04
LPCAT3-209ENST00000540060 WNT10BO00744 389 aa8.53□□□□□ -1.04
LPCAT3-209ENST00000540060 ZAP70P43403 619 aa8.53□□□□□ -1.04
LPCAT3-209ENST00000540060 ZGPATQ8N5A5 531 aaKnown RBP8.53□□□□□ -1.04
LPCAT3-209ENST00000540060 MTMR14Q8NCE2 650 aa8.53□□□□□ -1.04
LPCAT3-209ENST00000540060 SMC1BQ8NDV3 1235 aa8.53□□□□□ -1.04
LPCAT3-209ENST00000540060 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.53□□□□□ -1.04
LPCAT3-209ENST00000540060 BCL11AQ9H165 835 aa8.53□□□□□ -1.04
LPCAT3-209ENST00000540060 SNRKQ9NRH2 765 aa8.53□□□□□ -1.04
LPCAT3-209ENST00000540060 PGAP2Q9UHJ9 254 aa8.53□□□□□ -1.04
LPCAT3-209ENST00000540060 SERPINA10Q9UK55 444 aa8.53□□□□□ -1.04
LPCAT3-209ENST00000540060 TRPC6Q9Y210 931 aa8.53□□□□□ -1.04
LPCAT3-209ENST00000540060 PCDHAC2Q9Y5I4 1007 aa8.53□□□□□ -1.04
LPCAT3-209ENST00000540060 ASTN2O75129 1339 aaPredicted RBP8.53□□□□□ -1.04
LPCAT3-209ENST00000540060 CEP350Q5VT06 3117 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms