RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 PI16Q6UXB8 463 aa22.54■■□□□ 1.2
SNRPA1-203ENST00000540017 SAPCD2Q86UD0 394 aa22.54■■□□□ 1.2
SNRPA1-203ENST00000540017 JMYQ8N9B5 988 aa22.54■■□□□ 1.2
SNRPA1-203ENST00000540017 EAF2Q96CJ1 260 aaPredicted RBP22.54■■□□□ 1.2
SNRPA1-203ENST00000540017 TLR7Q9NYK1 1049 aaKnown RBP22.54■■□□□ 1.2
SNRPA1-203ENST00000540017 PCNTO95613 3336 aa22.54■■□□□ 1.2
SNRPA1-203ENST00000540017 SALL1Q9NSC2 1324 aa22.54■■□□□ 1.2
SNRPA1-203ENST00000540017 HMMRO75330 724 aa22.53■■□□□ 1.2
SNRPA1-203ENST00000540017 ARID4AP29374 1257 aaPredicted RBP22.53■■□□□ 1.2
SNRPA1-203ENST00000540017 VEGFBP49765 207 aa22.53■■□□□ 1.2
SNRPA1-203ENST00000540017 HDLBPQ00341 1268 aaKnown RBP22.53■■□□□ 1.2
SNRPA1-203ENST00000540017 APOBEC3FQ8IUX4 373 aaKnown RBP22.53■■□□□ 1.2
SNRPA1-203ENST00000540017 CCDC8Q9H0W5 538 aaPredicted RBP22.53■■□□□ 1.2
SNRPA1-203ENST00000540017 TDRD3Q9H7E2 651 aaKnown RBP22.53■■□□□ 1.2
SNRPA1-203ENST00000540017 HMG20BQ9P0W2 317 aa22.53■■□□□ 1.2
SNRPA1-203ENST00000540017 DBNLQ9UJU6 430 aaKnown RBP22.53■■□□□ 1.2
SNRPA1-203ENST00000540017 TEKT1Q969V4 418 aa22.52■■□□□ 1.2
SNRPA1-203ENST00000540017 MRIQ9BWK5 157 aa22.52■■□□□ 1.2
SNRPA1-203ENST00000540017 GBA2Q9HCG7 927 aaPredicted RBP22.52■■□□□ 1.2
SNRPA1-203ENST00000540017 ZNF70Q9UC06 446 aaPredicted RBP22.52■■□□□ 1.2
SNRPA1-203ENST00000540017 PDS5AQ29RF7 1337 aaKnown RBP22.52■■□□□ 1.2
SNRPA1-203ENST00000540017 APBB1O00213 710 aa22.51■■□□□ 1.19
SNRPA1-203ENST00000540017 MYO1BO43795 1136 aa22.51■■□□□ 1.19
SNRPA1-203ENST00000540017 MCAMP43121 646 aa22.51■■□□□ 1.19
SNRPA1-203ENST00000540017 DIXDC1Q155Q3 683 aa22.51■■□□□ 1.19
SNRPA1-203ENST00000540017 SPDYE2Q495Y8 402 aa22.51■■□□□ 1.19
SNRPA1-203ENST00000540017 RHPN1Q8TCX5 695 aa22.51■■□□□ 1.19
SNRPA1-203ENST00000540017 IL1RAPL2Q9NP60 686 aa22.51■■□□□ 1.19
SNRPA1-203ENST00000540017 LDHBP07195 334 aaKnown RBP22.5■■□□□ 1.19
SNRPA1-203ENST00000540017 HSP90AB4PQ58FF6 505 aa22.5■■□□□ 1.19
SNRPA1-203ENST00000540017 APOBEC3HQ6NTF7 200 aaKnown RBP22.5■■□□□ 1.19
SNRPA1-203ENST00000540017 HHIPL2Q6UWX4 724 aa22.5■■□□□ 1.19
SNRPA1-203ENST00000540017 ERC1Q8IUD2 1116 aa22.5■■□□□ 1.19
SNRPA1-203ENST00000540017 SPATA5Q8NB90 893 aa22.5■■□□□ 1.19
SNRPA1-203ENST00000540017 ZDHHC15Q96MV8 337 aa22.5■■□□□ 1.19
SNRPA1-203ENST00000540017 CRBNQ96SW2 442 aa22.5■■□□□ 1.19
SNRPA1-203ENST00000540017 DEFB129Q9H1M3 183 aa22.5■■□□□ 1.19
SNRPA1-203ENST00000540017 VEZTQ9HBM0 779 aa22.5■■□□□ 1.19
SNRPA1-203ENST00000540017 MAST3O60307 1309 aa22.5■■□□□ 1.19
SNRPA1-203ENST00000540017 CYP4F22Q6NT55 531 aa22.49■■□□□ 1.19
SNRPA1-203ENST00000540017 C2orf69Q8N8R5 385 aa22.49■■□□□ 1.19
SNRPA1-203ENST00000540017 ABCF2Q9UG63 623 aa22.49■■□□□ 1.19
SNRPA1-203ENST00000540017 UQCRFS1P1P0C7P4 283 aa22.48■■□□□ 1.19
SNRPA1-203ENST00000540017 HUNKP57058 714 aa22.48■■□□□ 1.19
SNRPA1-203ENST00000540017 TTC39AQ5SRH9 613 aa22.48■■□□□ 1.19
SNRPA1-203ENST00000540017 TBC1D9Q6ZT07 1266 aa22.48■■□□□ 1.19
SNRPA1-203ENST00000540017 MOB2Q70IA6 237 aa22.48■■□□□ 1.19
SNRPA1-203ENST00000540017 SNRKQ9NRH2 765 aa22.48■■□□□ 1.19
SNRPA1-203ENST00000540017 DAGLAQ9Y4D2 1042 aa22.48■■□□□ 1.19
SNRPA1-203ENST00000540017 PCDHB15Q9Y5E8 787 aa22.48■■□□□ 1.19
SNRPA1-203ENST00000540017 CACNB3P54284 484 aa22.47■■□□□ 1.19
SNRPA1-203ENST00000540017 CCDC158Q5M9N0 1113 aa22.47■■□□□ 1.19
SNRPA1-203ENST00000540017 PAXIP1Q6ZW49 1069 aaPredicted RBP22.47■■□□□ 1.19
SNRPA1-203ENST00000540017 AACSQ86V21 672 aa22.47■■□□□ 1.19
SNRPA1-203ENST00000540017 KIF1BPQ96EK5 621 aa22.47■■□□□ 1.19
SNRPA1-203ENST00000540017 CAPNS2Q96L46 248 aa22.47■■□□□ 1.19
SNRPA1-203ENST00000540017 WDR33Q9C0J8 1336 aaKnown RBP22.47■■□□□ 1.19
SNRPA1-203ENST00000540017 AKAP11Q9UKA4 1901 aa22.47■■□□□ 1.19
SNRPA1-203ENST00000540017 TCP10L2B9ZVM9 353 aa22.46■■□□□ 1.19
SNRPA1-203ENST00000540017 RASA3Q14644 834 aa22.46■■□□□ 1.19
SNRPA1-203ENST00000540017 ZGPATQ8N5A5 531 aaKnown RBP22.46■■□□□ 1.19
SNRPA1-203ENST00000540017 ZNF384Q8TF68 577 aa22.46■■□□□ 1.19
SNRPA1-203ENST00000540017 HHIPL1Q96JK4 782 aa22.46■■□□□ 1.19
SNRPA1-203ENST00000540017 RAB11FIP3O75154 756 aa22.45■■□□□ 1.18
SNRPA1-203ENST00000540017 GRM1Q13255 1194 aa22.45■■□□□ 1.18
SNRPA1-203ENST00000540017 ZNF512BQ96KM6 892 aaPredicted RBP22.45■■□□□ 1.18
SNRPA1-203ENST00000540017 FZD1Q9UP38 647 aa22.45■■□□□ 1.18
SNRPA1-203ENST00000540017 SSC5DA1L4H1 1573 aa22.45■■□□□ 1.18
SNRPA1-203ENST00000540017 NBPF12Q5TAG4 269 aaPredicted RBP22.44■■□□□ 1.18
SNRPA1-203ENST00000540017 CDAN1Q8IWY9 1227 aa22.44■■□□□ 1.18
SNRPA1-203ENST00000540017 PAPPA2Q9BXP8 1791 aa22.44■■□□□ 1.18
SNRPA1-203ENST00000540017 BCL11AQ9H165 835 aa22.44■■□□□ 1.18
SNRPA1-203ENST00000540017 PPP2R3BQ9Y5P8 575 aa22.44■■□□□ 1.18
SNRPA1-203ENST00000540017 ZAP70P43403 619 aa22.43■■□□□ 1.18
SNRPA1-203ENST00000540017 MECOMQ03112 1051 aa22.43■■□□□ 1.18
SNRPA1-203ENST00000540017 PRKG1Q13976 671 aa22.43■■□□□ 1.18
SNRPA1-203ENST00000540017 SPTY2D1Q68D10 685 aaPredicted RBP22.43■■□□□ 1.18
SNRPA1-203ENST00000540017 CDC42EP5Q6NZY7 148 aa22.43■■□□□ 1.18
SNRPA1-203ENST00000540017 ERICH6Q7L0X2 663 aa22.43■■□□□ 1.18
SNRPA1-203ENST00000540017 DZIP1Q86YF9 867 aaKnown RBP22.43■■□□□ 1.18
SNRPA1-203ENST00000540017 MYH2Q9UKX2 1941 aa22.43■■□□□ 1.18
SNRPA1-203ENST00000540017 GAKO14976 1311 aa22.42■■□□□ 1.18
SNRPA1-203ENST00000540017 UBE2Q2LH0YL09 131 aa22.42■■□□□ 1.18
SNRPA1-203ENST00000540017 AOC2O75106 756 aa22.42■■□□□ 1.18
SNRPA1-203ENST00000540017 CYP2E1P05181 493 aaPredicted RBP22.42■■□□□ 1.18
SNRPA1-203ENST00000540017 FKBP1BP68106 108 aa22.42■■□□□ 1.18
SNRPA1-203ENST00000540017 CLASRPQ8N2M8 674 aaKnown RBP22.42■■□□□ 1.18
SNRPA1-203ENST00000540017 TEPSINQ96N21 525 aa22.42■■□□□ 1.18
SNRPA1-203ENST00000540017 TMEM39BQ9GZU3 492 aa22.42■■□□□ 1.18
SNRPA1-203ENST00000540017 DCTPP1Q9H773 170 aa22.42■■□□□ 1.18
SNRPA1-203ENST00000540017 SUPT16HQ9Y5B9 1047 aaKnown RBP22.42■■□□□ 1.18
SNRPA1-203ENST00000540017 NDUFB9Q9Y6M9 179 aa22.42■■□□□ 1.18
SNRPA1-203ENST00000540017 SMARCA5O60264 1052 aaPredicted RBP22.41■■□□□ 1.18
SNRPA1-203ENST00000540017 NF2P35240 595 aa22.41■■□□□ 1.18
SNRPA1-203ENST00000540017 ECE1P42892 770 aa22.41■■□□□ 1.18
SNRPA1-203ENST00000540017 TNFAIP1Q13829 316 aa22.41■■□□□ 1.18
SNRPA1-203ENST00000540017 RGMBQ6NW40 437 aa22.41■■□□□ 1.18
SNRPA1-203ENST00000540017 NSUN4Q96CB9 384 aaKnown RBP22.41■■□□□ 1.18
SNRPA1-203ENST00000540017 THSD7BQ9C0I4 1608 aa22.4■■□□□ 1.18
SNRPA1-203ENST00000540017 FAM155AB1AL88 458 aaPredicted RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms