RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 NOL10Q9BSC4 688 aaKnown RBP11.57□□□□□ -0.56
TRAF1-202ENST00000540010 RIPOR2Q9Y4F9 1068 aa11.57□□□□□ -0.56
TRAF1-202ENST00000540010 UQCRFS1P1P0C7P4 283 aa11.57□□□□□ -0.56
TRAF1-202ENST00000540010 HAND2P61296 217 aa11.57□□□□□ -0.56
TRAF1-202ENST00000540010 SAMD1Q6SPF0 538 aaPredicted RBP11.57□□□□□ -0.56
TRAF1-202ENST00000540010 SMIM5Q71RC9 77 aa11.57□□□□□ -0.56
TRAF1-202ENST00000540010 C8orf76Q96K31 380 aa11.57□□□□□ -0.56
TRAF1-202ENST00000540010 DDX19AQ9NUU7 478 aaKnown RBP11.57□□□□□ -0.56
TRAF1-202ENST00000540010 CTNNA3Q9UI47 895 aa11.57□□□□□ -0.56
TRAF1-202ENST00000540010 RTCBQ9Y3I0 505 aaKnown RBP11.57□□□□□ -0.56
TRAF1-202ENST00000540010 UBR2Q8IWV8 1755 aa11.57□□□□□ -0.56
TRAF1-202ENST00000540010 MROH5Q6ZUA9 1318 aa11.57□□□□□ -0.56
TRAF1-202ENST00000540010 RPS6KB1P23443 525 aa11.57□□□□□ -0.56
TRAF1-202ENST00000540010 TTF1Q15361 905 aaPredicted RBP11.57□□□□□ -0.56
TRAF1-202ENST00000540010 SLC9C2Q5TAH2 1124 aa11.57□□□□□ -0.56
TRAF1-202ENST00000540010 NBPF5PQ86XG9 351 aaPredicted RBP11.57□□□□□ -0.56
TRAF1-202ENST00000540010 BRF1Q92994 677 aa11.57□□□□□ -0.56
TRAF1-202ENST00000540010 TTC14Q96N46 770 aa11.57□□□□□ -0.56
TRAF1-202ENST00000540010 SETDB2Q96T68 719 aa11.57□□□□□ -0.56
TRAF1-202ENST00000540010 SHANK3Q9BYB0 1731 aa11.57□□□□□ -0.56
TRAF1-202ENST00000540010 CCDC69A6NI79 296 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 ZMYM1Q5SVZ6 1142 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 LINC00116Q8NCU8 138 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 LPIN2Q92539 896 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 SMARCE1Q969G3 411 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 MED23Q9ULK4 1368 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 GLI3P10071 1580 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 ANO6Q4KMQ2 910 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 TMCO3Q6UWJ1 677 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 LEKR1Q6ZMV7 388 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 AK7Q96M32 723 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 TMX4Q9H1E5 349 aaPredicted RBP11.56□□□□□ -0.56
TRAF1-202ENST00000540010 COL22A1Q8NFW1 1626 aaPredicted RBP11.56□□□□□ -0.56
TRAF1-202ENST00000540010 SPATA31A6Q5VVP1 1343 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 H0YHG0 523 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 PDIA4P13667 645 aaKnown RBP11.56□□□□□ -0.56
TRAF1-202ENST00000540010 IMMTQ16891 758 aaKnown RBP11.56□□□□□ -0.56
TRAF1-202ENST00000540010 HSP90AA4PQ58FG1 418 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 GAS2L3Q86XJ1 694 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 ANKRD18AQ8IVF6 992 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 C17orf53Q8N3J3 647 aaPredicted RBP11.56□□□□□ -0.56
TRAF1-202ENST00000540010 ZBTB9Q96C00 473 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 CWC15Q9P013 229 aaKnown RBP11.56□□□□□ -0.56
TRAF1-202ENST00000540010 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRAF1-202ENST00000540010 SLIT2O94813 1529 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 SCARF1Q14162 830 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 FAM173BQ6P4H8 233 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 CPLX3Q8WVH0 158 aa11.56□□□□□ -0.56
TRAF1-202ENST00000540010 PHKA1P46020 1223 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 UVSSAQ2YD98 709 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 CCDC102BQ68D86 513 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 PRIMPOLQ96LW4 560 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 DNAJC25Q9H1X3 360 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 RFX7Q2KHR2 1363 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 MAST3O60307 1309 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 SMTNL1A8MU46 457 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 F13A1P00488 732 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 HMGB1P09429 215 aaKnown RBP11.55□□□□□ -0.56
TRAF1-202ENST00000540010 RFC4P35249 363 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 USPL1Q5W0Q7 1092 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 Q6ZUG5 572 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 TMC6Q7Z403 805 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRAF1-202ENST00000540010 PLCH1Q4KWH8 1693 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 PAPPAQ13219 1627 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 AFF2P51816 1311 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 ITGB4P16144 1822 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 SNAP23O00161 211 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 LARGE1O95461 756 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 CYP21A2P08686 494 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 ME3Q16798 604 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 NOM1Q5C9Z4 860 aaKnown RBP11.55□□□□□ -0.56
TRAF1-202ENST00000540010 CCDC24Q8N4L8 307 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 CERKQ8TCT0 537 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 AIDAQ96BJ3 306 aa11.55□□□□□ -0.56
TRAF1-202ENST00000540010 IQSEC3Q9UPP2 1182 aaPredicted RBP11.55□□□□□ -0.56
TRAF1-202ENST00000540010 CBFA2T2O43439 604 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 BRD1O95696 1058 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 HSPD1P10809 573 aaKnown RBP11.54□□□□□ -0.56
TRAF1-202ENST00000540010 FAM193AP78312 1265 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 ERFEQ4G0M1 354 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 ARHGAP29Q52LW3 1261 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 CCAR1Q8IX12 1150 aaKnown RBP11.54□□□□□ -0.56
TRAF1-202ENST00000540010 APPBP2Q92624 585 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 CCDC102AQ96A19 550 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 DSCC1Q9BVC3 393 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 ZSWIM4Q9H7M6 989 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 TPCN1Q9ULQ1 816 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 SYT1P21579 422 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 HSPA1LP34931 641 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 TDO2P48775 406 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 MAP3K12Q12852 859 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 PTF1AQ7RTS3 328 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 FNBP4Q8N3X1 1017 aaPredicted RBP11.54□□□□□ -0.56
TRAF1-202ENST00000540010 GJD4Q96KN9 370 aaPredicted RBP11.54□□□□□ -0.56
TRAF1-202ENST00000540010 GNL3LQ9NVN8 582 aaKnown RBP11.54□□□□□ -0.56
TRAF1-202ENST00000540010 LRP2BPQ9P2M1 347 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 TAF6LQ9Y6J9 622 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 M0R2C6 588 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 MCAMP43121 646 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms