RNA–Protein interactions for RNA: ENST00000539743.5

CPT1A-205, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CPT1A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-205ENST00000539743 ADALQ6DHV7 355 aa14.33□□□□□ -0.11
CPT1A-205ENST00000539743 KCNV1Q6PIU1 500 aa14.33□□□□□ -0.11
CPT1A-205ENST00000539743 PPP1R42Q7Z4L9 355 aa14.33□□□□□ -0.11
CPT1A-205ENST00000539743 FMNL2Q96PY5 1086 aa14.33□□□□□ -0.11
CPT1A-205ENST00000539743 CDC23Q9UJX2 597 aa14.33□□□□□ -0.11
CPT1A-205ENST00000539743 FLT4P35916 1363 aa14.33□□□□□ -0.12
CPT1A-205ENST00000539743 SERPINC1P01008 464 aa14.33□□□□□ -0.12
CPT1A-205ENST00000539743 GPATCH3Q96I76 525 aa14.33□□□□□ -0.12
CPT1A-205ENST00000539743 NPHP4O75161 1426 aaPredicted RBP14.32□□□□□ -0.12
CPT1A-205ENST00000539743 EBAG9O00559 213 aa14.32□□□□□ -0.12
CPT1A-205ENST00000539743 RNF40O75150 1001 aa14.32□□□□□ -0.12
CPT1A-205ENST00000539743 SLC3A2P08195 630 aaKnown RBP14.32□□□□□ -0.12
CPT1A-205ENST00000539743 LIG3P49916 1009 aa14.32□□□□□ -0.12
CPT1A-205ENST00000539743 TMEM132AQ24JP5 1023 aa14.32□□□□□ -0.12
CPT1A-205ENST00000539743 CFAP100Q494V2 611 aa14.32□□□□□ -0.12
CPT1A-205ENST00000539743 PLEKHO1Q53GL0 409 aaPredicted RBP14.32□□□□□ -0.12
CPT1A-205ENST00000539743 GBP6Q6ZN66 633 aa14.32□□□□□ -0.12
CPT1A-205ENST00000539743 SMARCC2Q8TAQ2 1214 aa14.32□□□□□ -0.12
CPT1A-205ENST00000539743 RAI14Q9P0K7 980 aa14.32□□□□□ -0.12
CPT1A-205ENST00000539743 SHOX2O60902 331 aaPredicted RBP14.32□□□□□ -0.12
CPT1A-205ENST00000539743 PHACTR2O75167 634 aa14.32□□□□□ -0.12
CPT1A-205ENST00000539743 DDR1Q08345 913 aa14.32□□□□□ -0.12
CPT1A-205ENST00000539743 TCEANC2Q96MN5 208 aa14.32□□□□□ -0.12
CPT1A-205ENST00000539743 PLEKHA4Q9H4M7 779 aa14.32□□□□□ -0.12
CPT1A-205ENST00000539743 GNL3LQ9NVN8 582 aaKnown RBP14.32□□□□□ -0.12
CPT1A-205ENST00000539743 KRT32Q14532 448 aa14.31□□□□□ -0.12
CPT1A-205ENST00000539743 LRCH2Q5VUJ6 765 aa14.31□□□□□ -0.12
CPT1A-205ENST00000539743 GIMAP7Q8NHV1 300 aa14.31□□□□□ -0.12
CPT1A-205ENST00000539743 FTOQ9C0B1 505 aaKnown RBP eCLIP14.31□□□□□ -0.12
CPT1A-205ENST00000539743 HSD3B7Q9H2F3 369 aa14.31□□□□□ -0.12
CPT1A-205ENST00000539743 ZSWIM4Q9H7M6 989 aa14.31□□□□□ -0.12
CPT1A-205ENST00000539743 ECHDC1Q9NTX5 307 aa14.31□□□□□ -0.12
CPT1A-205ENST00000539743 FAM169AQ9Y6X4 670 aa14.31□□□□□ -0.12
CPT1A-205ENST00000539743 PATL2C9JE40 543 aaKnown RBP14.31□□□□□ -0.12
CPT1A-205ENST00000539743 PRPF6O94906 941 aaKnown RBP14.31□□□□□ -0.12
CPT1A-205ENST00000539743 ATP1A3P13637 1013 aa14.31□□□□□ -0.12
CPT1A-205ENST00000539743 PRPF38AQ8NAV1 312 aaKnown RBP14.31□□□□□ -0.12
CPT1A-205ENST00000539743 SUGCTQ9HAC7 445 aa14.31□□□□□ -0.12
CPT1A-205ENST00000539743 TSPYL4Q9UJ04 414 aa14.31□□□□□ -0.12
CPT1A-205ENST00000539743 PCDHA7Q9UN72 937 aa14.31□□□□□ -0.12
CPT1A-205ENST00000539743 CEP170BQ9Y4F5 1589 aaPredicted RBP14.31□□□□□ -0.12
CPT1A-205ENST00000539743 PIK3C2AO00443 1686 aa14.3□□□□□ -0.12
CPT1A-205ENST00000539743 KDRP35968 1356 aa14.3□□□□□ -0.12
CPT1A-205ENST00000539743 KIF3CO14782 793 aa14.3□□□□□ -0.12
CPT1A-205ENST00000539743 KCNA6P17658 529 aa14.3□□□□□ -0.12
CPT1A-205ENST00000539743 MYL5Q02045 173 aa14.3□□□□□ -0.12
CPT1A-205ENST00000539743 TBX2Q13207 712 aaPredicted RBP14.3□□□□□ -0.12
CPT1A-205ENST00000539743 COL9A3Q14050 684 aaPredicted RBP14.3□□□□□ -0.12
CPT1A-205ENST00000539743 WWC2Q6AWC2 1192 aa14.3□□□□□ -0.12
CPT1A-205ENST00000539743 RBM28Q9NW13 759 aaKnown RBP14.3□□□□□ -0.12
CPT1A-205ENST00000539743 NEDD4P46934 1319 aa14.3□□□□□ -0.12
CPT1A-205ENST00000539743 NDUFA8P51970 172 aa14.3□□□□□ -0.12
CPT1A-205ENST00000539743 VSNL1P62760 191 aa14.3□□□□□ -0.12
CPT1A-205ENST00000539743 NEDD9Q14511 834 aa14.3□□□□□ -0.12
CPT1A-205ENST00000539743 WDR93Q6P2C0 686 aa14.3□□□□□ -0.12
CPT1A-205ENST00000539743 CLASRPQ8N2M8 674 aaKnown RBP14.3□□□□□ -0.12
CPT1A-205ENST00000539743 TBC1D22AQ8WUA7 517 aa14.3□□□□□ -0.12
CPT1A-205ENST00000539743 DPF2Q92785 391 aa14.3□□□□□ -0.12
CPT1A-205ENST00000539743 CABS1Q96KC9 395 aa14.3□□□□□ -0.12
CPT1A-205ENST00000539743 PUF60Q9UHX1 559 aaKnown RBP14.3□□□□□ -0.12
CPT1A-205ENST00000539743 ATXN2Q99700 1313 aaKnown RBP14.29□□□□□ -0.12
CPT1A-205ENST00000539743 FMN2Q9NZ56 1722 aa14.29□□□□□ -0.12
CPT1A-205ENST00000539743 A0A1B0GVL5 298 aa14.29□□□□□ -0.12
CPT1A-205ENST00000539743 LRRIQ3A6PVS8 624 aaPredicted RBP14.29□□□□□ -0.12
CPT1A-205ENST00000539743 INPP5BP32019 993 aa14.29□□□□□ -0.12
CPT1A-205ENST00000539743 FBXW10Q5XX13 1052 aa14.29□□□□□ -0.12
CPT1A-205ENST00000539743 TOGARAM2Q6ZUX3 1019 aa14.29□□□□□ -0.12
CPT1A-205ENST00000539743 RTEL1Q9NZ71 1219 aa14.29□□□□□ -0.12
CPT1A-205ENST00000539743 SYF2O95926 243 aaKnown RBP14.29□□□□□ -0.12
CPT1A-205ENST00000539743 CCDC175P0C221 793 aa14.29□□□□□ -0.12
CPT1A-205ENST00000539743 GPTP24298 496 aa14.29□□□□□ -0.12
CPT1A-205ENST00000539743 NBPF20Q3BBV1 942 aa14.29□□□□□ -0.12
CPT1A-205ENST00000539743 NUTM2GQ5VZR2 741 aa14.29□□□□□ -0.12
CPT1A-205ENST00000539743 SMARCC1Q92922 1105 aaPredicted RBP14.29□□□□□ -0.12
CPT1A-205ENST00000539743 FAM212AQ96EL1 285 aa14.29□□□□□ -0.12
CPT1A-205ENST00000539743 IGSF1Q8N6C5 1336 aa14.28□□□□□ -0.12
CPT1A-205ENST00000539743 JCADQ9P266 1359 aa14.28□□□□□ -0.12
CPT1A-205ENST00000539743 BIN1O00499 593 aa14.28□□□□□ -0.12
CPT1A-205ENST00000539743 AMPHP49418 695 aa14.28□□□□□ -0.12
CPT1A-205ENST00000539743 PIP4K2BP78356 416 aa14.28□□□□□ -0.12
CPT1A-205ENST00000539743 NMIQ13287 307 aaPredicted RBP14.28□□□□□ -0.12
CPT1A-205ENST00000539743 CDHR2Q9BYE9 1310 aa14.28□□□□□ -0.12
CPT1A-205ENST00000539743 RGPD8O14715 1765 aaPredicted RBP14.28□□□□□ -0.12
CPT1A-205ENST00000539743 KIF5CO60282 957 aa14.27□□□□□ -0.12
CPT1A-205ENST00000539743 CCT5P48643 541 aa14.27□□□□□ -0.12
CPT1A-205ENST00000539743 KCNG4Q8TDN1 519 aa14.27□□□□□ -0.12
CPT1A-205ENST00000539743 MIEF2Q96C03 454 aa14.27□□□□□ -0.12
CPT1A-205ENST00000539743 CLIC6Q96NY7 704 aa14.27□□□□□ -0.12
CPT1A-205ENST00000539743 CTAGE15A4D2H0 777 aa14.27□□□□□ -0.13
CPT1A-205ENST00000539743 CTAGE8P0CG41 777 aa14.27□□□□□ -0.13
CPT1A-205ENST00000539743 HSP90B1P14625 803 aaKnown RBP14.27□□□□□ -0.13
CPT1A-205ENST00000539743 ERCC3P19447 782 aa14.27□□□□□ -0.13
CPT1A-205ENST00000539743 MCM3P25205 808 aa14.27□□□□□ -0.13
CPT1A-205ENST00000539743 ELF1P32519 619 aa14.27□□□□□ -0.13
CPT1A-205ENST00000539743 GOLGA8FQ08AF8 430 aa14.27□□□□□ -0.13
CPT1A-205ENST00000539743 GOLGA8DPQ0D2H9 430 aa14.27□□□□□ -0.13
CPT1A-205ENST00000539743 SCRN1Q12765 414 aa14.27□□□□□ -0.13
CPT1A-205ENST00000539743 WHAMMP3Q1A5X7 153 aa14.27□□□□□ -0.13
CPT1A-205ENST00000539743 KIF4BQ2VIQ3 1234 aa14.27□□□□□ -0.13
CPT1A-205ENST00000539743 CTAGE6Q86UF2 777 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms