RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 KBTBD3Q8NAB2 608 aa18.68■□□□□ 0.58
DDB1-216ENST00000539739 DPF2Q92785 391 aa18.68■□□□□ 0.58
DDB1-216ENST00000539739 FSD1Q9BTV5 496 aa18.68■□□□□ 0.58
DDB1-216ENST00000539739 HDAC9Q9UKV0 1011 aa18.68■□□□□ 0.58
DDB1-216ENST00000539739 TTF2Q9UNY4 1162 aaKnown RBP18.68■□□□□ 0.58
DDB1-216ENST00000539739 PSME4Q14997 1843 aa18.68■□□□□ 0.58
DDB1-216ENST00000539739 GSPT1P15170 499 aaKnown RBP18.67■□□□□ 0.58
DDB1-216ENST00000539739 GMPSP49915 693 aaPredicted RBP18.67■□□□□ 0.58
DDB1-216ENST00000539739 ZSCAN25Q6NSZ9 544 aa18.67■□□□□ 0.58
DDB1-216ENST00000539739 SLF2Q8IX21 1173 aa18.67■□□□□ 0.58
DDB1-216ENST00000539739 GMLQ99445 158 aa18.67■□□□□ 0.58
DDB1-216ENST00000539739 USP17L8P0C7I0 530 aa18.67■□□□□ 0.58
DDB1-216ENST00000539739 BMP2KLQ5H9B9 411 aa18.67■□□□□ 0.58
DDB1-216ENST00000539739 TMED8Q6PL24 325 aaPredicted RBP18.67■□□□□ 0.58
DDB1-216ENST00000539739 SDSP20132 328 aa18.66■□□□□ 0.58
DDB1-216ENST00000539739 LMOD1P29536 600 aaPredicted RBP18.66■□□□□ 0.58
DDB1-216ENST00000539739 GSTO1P78417 241 aa18.66■□□□□ 0.58
DDB1-216ENST00000539739 GRIK5Q16478 980 aa18.66■□□□□ 0.58
DDB1-216ENST00000539739 TICAM2Q86XR7 235 aa18.66■□□□□ 0.58
DDB1-216ENST00000539739 H7C1D1 291 aa18.65■□□□□ 0.58
DDB1-216ENST00000539739 ZFYP08048 801 aaPredicted RBP18.65■□□□□ 0.58
DDB1-216ENST00000539739 MECOMQ03112 1051 aa18.65■□□□□ 0.58
DDB1-216ENST00000539739 SLC9C2Q5TAH2 1124 aa18.65■□□□□ 0.58
DDB1-216ENST00000539739 NAA16Q6N069 864 aaPredicted RBP18.65■□□□□ 0.58
DDB1-216ENST00000539739 NSUN4Q96CB9 384 aaKnown RBP18.65■□□□□ 0.58
DDB1-216ENST00000539739 CNOT7Q9UIV1 285 aaKnown RBP18.65■□□□□ 0.58
DDB1-216ENST00000539739 LDHCP07864 332 aa18.64■□□□□ 0.57
DDB1-216ENST00000539739 HDLBPQ00341 1268 aaKnown RBP18.64■□□□□ 0.57
DDB1-216ENST00000539739 MAGEB6Q8N7X4 407 aa18.64■□□□□ 0.57
DDB1-216ENST00000539739 MRIQ9BWK5 157 aa18.64■□□□□ 0.57
DDB1-216ENST00000539739 SCNN1DP51172 638 aa18.63■□□□□ 0.57
DDB1-216ENST00000539739 MICALL2Q8IY33 904 aa18.63■□□□□ 0.57
DDB1-216ENST00000539739 TEKT1Q969V4 418 aa18.63■□□□□ 0.57
DDB1-216ENST00000539739 L3MBTL3Q96JM7 780 aaPredicted RBP18.63■□□□□ 0.57
DDB1-216ENST00000539739 GPRC5DQ9NZD1 345 aa18.63■□□□□ 0.57
DDB1-216ENST00000539739 SERPINA10Q9UK55 444 aa18.63■□□□□ 0.57
DDB1-216ENST00000539739 HIP1O00291 1037 aa18.63■□□□□ 0.57
DDB1-216ENST00000539739 PDE6AP16499 860 aa18.63■□□□□ 0.57
DDB1-216ENST00000539739 RBM5P52756 815 aaKnown RBP eCLIP18.63■□□□□ 0.57
DDB1-216ENST00000539739 ZNF646O15015 1829 aaPredicted RBP18.63■□□□□ 0.57
DDB1-216ENST00000539739 RNF113AO15541 343 aaKnown RBP18.62■□□□□ 0.57
DDB1-216ENST00000539739 CYP7A1P22680 504 aa18.62■□□□□ 0.57
DDB1-216ENST00000539739 ADD2P35612 726 aa18.62■□□□□ 0.57
DDB1-216ENST00000539739 ZNF280AP59817 542 aaPredicted RBP18.62■□□□□ 0.57
DDB1-216ENST00000539739 UBE3CQ15386 1083 aa18.62■□□□□ 0.57
DDB1-216ENST00000539739 DIXDC1Q155Q3 683 aa18.62■□□□□ 0.57
DDB1-216ENST00000539739 HHIPL2Q6UWX4 724 aa18.62■□□□□ 0.57
DDB1-216ENST00000539739 RBM19Q9Y4C8 960 aaKnown RBP18.62■□□□□ 0.57
DDB1-216ENST00000539739 RFX7Q2KHR2 1363 aa18.62■□□□□ 0.57
DDB1-216ENST00000539739 IQCA1LA6NCM1 817 aa18.61■□□□□ 0.57
DDB1-216ENST00000539739 CRKP46108 304 aa18.61■□□□□ 0.57
DDB1-216ENST00000539739 FAM163AQ96GL9 167 aaPredicted RBP18.61■□□□□ 0.57
DDB1-216ENST00000539739 NOL10Q9BSC4 688 aaKnown RBP18.61■□□□□ 0.57
DDB1-216ENST00000539739 ZNF532Q9HCE3 1301 aa18.61■□□□□ 0.57
DDB1-216ENST00000539739 DLGAP5Q15398 846 aa18.6■□□□□ 0.57
DDB1-216ENST00000539739 CFAP100Q494V2 611 aa18.6■□□□□ 0.57
DDB1-216ENST00000539739 MYOZ2Q9NPC6 264 aa18.6■□□□□ 0.57
DDB1-216ENST00000539739 HACL1Q9UJ83 578 aa18.6■□□□□ 0.57
DDB1-216ENST00000539739 DOCK2Q92608 1830 aa18.6■□□□□ 0.57
DDB1-216ENST00000539739 MROH7-TTC4A0A0A0MT08 1334 aa18.6■□□□□ 0.57
DDB1-216ENST00000539739 EPS15P42566 896 aa18.6■□□□□ 0.57
DDB1-216ENST00000539739 ZNF384Q8TF68 577 aa18.6■□□□□ 0.57
DDB1-216ENST00000539739 DIAPH3Q9NSV4 1193 aa18.6■□□□□ 0.57
DDB1-216ENST00000539739 BAG3O95817 575 aa18.59■□□□□ 0.57
DDB1-216ENST00000539739 MTMR14Q8NCE2 650 aa18.59■□□□□ 0.57
DDB1-216ENST00000539739 APPBP2Q92624 585 aa18.59■□□□□ 0.57
DDB1-216ENST00000539739 ZDHHC15Q96MV8 337 aa18.59■□□□□ 0.57
DDB1-216ENST00000539739 ADARB2Q9NS39 739 aaKnown RBP18.59■□□□□ 0.57
DDB1-216ENST00000539739 DAGLAQ9Y4D2 1042 aa18.59■□□□□ 0.57
DDB1-216ENST00000539739 MYO5AQ9Y4I1 1855 aaKnown RBP18.58■□□□□ 0.57
DDB1-216ENST00000539739 GAKO14976 1311 aa18.58■□□□□ 0.57
DDB1-216ENST00000539739 TCRBV5S4A2TA0A5A2 114 aa18.58■□□□□ 0.56
DDB1-216ENST00000539739 SHTN1A0MZ66 631 aa18.58■□□□□ 0.56
DDB1-216ENST00000539739 RBM26Q5T8P6 1007 aaKnown RBP18.58■□□□□ 0.56
DDB1-216ENST00000539739 CASC1Q6TDU7 716 aa18.58■□□□□ 0.56
DDB1-216ENST00000539739 CERS3Q8IU89 383 aa18.58■□□□□ 0.56
DDB1-216ENST00000539739 GPR75-ASB3A0A0A6YYF3 556 aa18.57■□□□□ 0.56
DDB1-216ENST00000539739 KIF4BQ2VIQ3 1234 aa18.57■□□□□ 0.56
DDB1-216ENST00000539739 SAMD7Q7Z3H4 446 aa18.57■□□□□ 0.56
DDB1-216ENST00000539739 MAST2Q6P0Q8 1798 aa18.57■□□□□ 0.56
DDB1-216ENST00000539739 AK9Q5TCS8 1911 aa18.57■□□□□ 0.56
DDB1-216ENST00000539739 SPDYE2BA6NHP3 402 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 MYO1BO43795 1136 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 SPDYE6P0CI01 402 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 VEGFAP15692 232 aaPredicted RBP18.56■□□□□ 0.56
DDB1-216ENST00000539739 PLCG2P16885 1265 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 BTDP43251 543 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 TBC1D10BQ4KMP7 808 aaPredicted RBP18.56■□□□□ 0.56
DDB1-216ENST00000539739 ZMYM1Q5SVZ6 1142 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 RUFY2Q8WXA3 655 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 AIDAQ96BJ3 306 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 HELLSQ9NRZ9 838 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 MYH2Q9UKX2 1941 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 MAGEB6P1A0A0J9YX57 407 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 CDC45O75419 566 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 CHGBP05060 677 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 CHMLP26374 656 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 EPHX2P34913 555 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 DEKP35659 375 aaKnown RBP18.56■□□□□ 0.56
DDB1-216ENST00000539739 SLFNL1Q499Z3 407 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms