RNA–Protein interactions for RNA: ENST00000539463.1

DENR-204, Transcript of density regulated re-initiation and release factor, human

TSL 2

Gene DENR, Length 671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENR-204	ENST00000539463	SPDYE2	Q495Y8	402 aa		32	■■■□□ 2.71
DENR-204	ENST00000539463	C1orf115	Q9H7X2	142 aa		32	■■■□□ 2.71
DENR-204	ENST00000539463	AKAP2	Q9Y2D5	859 aa		32	■■■□□ 2.71
DENR-204	ENST00000539463	PPP2R3B	Q9Y5P8	575 aa		32	■■■□□ 2.71
DENR-204	ENST00000539463	ATP8B2	P98198	1209 aa		31.99	■■■□□ 2.71
DENR-204	ENST00000539463	TTLL12	Q14166	644 aa	Predicted RBP	31.99	■■■□□ 2.71
DENR-204	ENST00000539463	POLA2	Q14181	598 aa		31.99	■■■□□ 2.71
DENR-204	ENST00000539463	BEGAIN	Q9BUH8	593 aa		31.99	■■■□□ 2.71
DENR-204	ENST00000539463	MRI	Q9BWK5	157 aa		31.99	■■■□□ 2.71
DENR-204	ENST00000539463	TDRD3	Q9H7E2	651 aa	Known RBP	31.99	■■■□□ 2.71
DENR-204	ENST00000539463	ZNF70	Q9UC06	446 aa	Predicted RBP	31.99	■■■□□ 2.71
DENR-204	ENST00000539463		A0A1B0GUL7	405 aa		31.98	■■■□□ 2.71
DENR-204	ENST00000539463	SLC10A3	P09131	477 aa		31.98	■■■□□ 2.71
DENR-204	ENST00000539463	CCDC102B	Q68D86	513 aa		31.98	■■■□□ 2.71
DENR-204	ENST00000539463	ECM29	Q5VYK3	1845 aa		31.98	■■■□□ 2.71
DENR-204	ENST00000539463	HSPA8	P11142	646 aa	Known RBP	31.97	■■■□□ 2.71
DENR-204	ENST00000539463	LBX1	P52954	281 aa		31.97	■■■□□ 2.71
DENR-204	ENST00000539463	G3BP1	Q13283	466 aa	Known RBP eCLIP	31.97	■■■□□ 2.71
DENR-204	ENST00000539463	SSH3	Q8TE77	659 aa		31.97	■■■□□ 2.71
DENR-204	ENST00000539463	TEKT1	Q969V4	418 aa		31.97	■■■□□ 2.71
DENR-204	ENST00000539463	PRDM10	Q9NQV6	1147 aa		31.97	■■■□□ 2.71
DENR-204	ENST00000539463	SEMA3E	O15041	775 aa		31.96	■■■□□ 2.71
DENR-204	ENST00000539463	ZBTB22	O15209	634 aa		31.96	■■■□□ 2.71
DENR-204	ENST00000539463	RASA3	Q14644	834 aa		31.96	■■■□□ 2.71
DENR-204	ENST00000539463	RASAL3	Q86YV0	1011 aa		31.96	■■■□□ 2.71
DENR-204	ENST00000539463	XAGE2	Q96GT9	111 aa		31.96	■■■□□ 2.71
DENR-204	ENST00000539463	RCAN3	Q9UKA8	241 aa		31.96	■■■□□ 2.71
DENR-204	ENST00000539463	DENND2A	Q9ULE3	1009 aa		31.96	■■■□□ 2.71
DENR-204	ENST00000539463	KIF23	Q02241	960 aa	Predicted RBP	31.95	■■■□□ 2.71
DENR-204	ENST00000539463	PRKG1	Q13976	671 aa		31.95	■■■□□ 2.71
DENR-204	ENST00000539463	ZDHHC15	Q96MV8	337 aa		31.95	■■■□□ 2.71
DENR-204	ENST00000539463	MAST3	O60307	1309 aa		31.95	■■■□□ 2.7
DENR-204	ENST00000539463	MS4A1	P11836	297 aa		31.94	■■■□□ 2.7
DENR-204	ENST00000539463	IFFO2	Q5TF58	517 aa		31.94	■■■□□ 2.7
DENR-204	ENST00000539463	ARMC9	Q7Z3E5	817 aa		31.94	■■■□□ 2.7
DENR-204	ENST00000539463	TNFAIP1	Q13829	316 aa		31.93	■■■□□ 2.7
DENR-204	ENST00000539463	HHIPL2	Q6UWX4	724 aa		31.93	■■■□□ 2.7
DENR-204	ENST00000539463	NEUROD6	Q96NK8	337 aa		31.93	■■■□□ 2.7
DENR-204	ENST00000539463	MVP	Q14764	893 aa	Known RBP	31.92	■■■□□ 2.7
DENR-204	ENST00000539463	SUPT20HL1	Q3ZLR7	823 aa		31.92	■■■□□ 2.7
DENR-204	ENST00000539463	NBPF12	Q5TAG4	269 aa	Predicted RBP	31.92	■■■□□ 2.7
DENR-204	ENST00000539463	APOBEC3H	Q6NTF7	200 aa	Known RBP	31.92	■■■□□ 2.7
DENR-204	ENST00000539463	FZD1	Q9UP38	647 aa		31.92	■■■□□ 2.7
DENR-204	ENST00000539463	SALL1	Q9NSC2	1324 aa		31.92	■■■□□ 2.7
DENR-204	ENST00000539463	SSC5D	A1L4H1	1573 aa		31.91	■■■□□ 2.7
DENR-204	ENST00000539463	LDLRAD1	Q5T700	205 aa		31.91	■■■□□ 2.7
DENR-204	ENST00000539463	ANGEL1	Q9UNK9	670 aa	Known RBP	31.91	■■■□□ 2.7
DENR-204	ENST00000539463	TCP10L2	B9ZVM9	353 aa		31.9	■■■□□ 2.7
DENR-204	ENST00000539463	CA12	O43570	354 aa		31.9	■■■□□ 2.7
DENR-204	ENST00000539463	PRDX5	P30044	214 aa		31.9	■■■□□ 2.7
DENR-204	ENST00000539463	RASGRF1	Q13972	1273 aa		31.9	■■■□□ 2.7
DENR-204	ENST00000539463	MYH13	Q9UKX3	1938 aa		31.89	■■■□□ 2.7
DENR-204	ENST00000539463	PPP1R12B	O60237	982 aa	Predicted RBP	31.89	■■■□□ 2.7
DENR-204	ENST00000539463	TNS4	Q8IZW8	715 aa		31.89	■■■□□ 2.7
DENR-204	ENST00000539463	TSKS	Q9UJT2	592 aa		31.89	■■■□□ 2.7
DENR-204	ENST00000539463	SURF6	O75683	361 aa	Known RBP	31.88	■■■□□ 2.69
DENR-204	ENST00000539463	LDHB	P07195	334 aa	Known RBP	31.88	■■■□□ 2.69
DENR-204	ENST00000539463	MAP3K11	Q16584	847 aa		31.88	■■■□□ 2.69
DENR-204	ENST00000539463	CEP85	Q6P2H3	762 aa		31.88	■■■□□ 2.69
DENR-204	ENST00000539463	CSRNP1	Q96S65	589 aa		31.88	■■■□□ 2.69
DENR-204	ENST00000539463	PDS5A	Q29RF7	1337 aa	Known RBP	31.87	■■■□□ 2.69
DENR-204	ENST00000539463	TEPSIN	Q96N21	525 aa		31.87	■■■□□ 2.69
DENR-204	ENST00000539463	NOP58	Q9Y2X3	529 aa	Known RBP	31.87	■■■□□ 2.69
DENR-204	ENST00000539463	TNNI2	P48788	182 aa		31.86	■■■□□ 2.69
DENR-204	ENST00000539463	CACNB3	P54284	484 aa		31.86	■■■□□ 2.69
DENR-204	ENST00000539463	OS9	Q13438	667 aa	Predicted RBP	31.86	■■■□□ 2.69
DENR-204	ENST00000539463	DIXDC1	Q155Q3	683 aa		31.86	■■■□□ 2.69
DENR-204	ENST00000539463	GORAB	Q5T7V8	394 aa		31.86	■■■□□ 2.69
DENR-204	ENST00000539463	TMEM39B	Q9GZU3	492 aa		31.86	■■■□□ 2.69
DENR-204	ENST00000539463	CDAN1	Q8IWY9	1227 aa		31.85	■■■□□ 2.69
DENR-204	ENST00000539463	ZGPAT	Q8N5A5	531 aa	Known RBP	31.85	■■■□□ 2.69
DENR-204	ENST00000539463	GPR108	Q9NPR9	543 aa		31.85	■■■□□ 2.69
DENR-204	ENST00000539463	COG6	Q9Y2V7	657 aa		31.85	■■■□□ 2.69
DENR-204	ENST00000539463	DAGLA	Q9Y4D2	1042 aa		31.85	■■■□□ 2.69
DENR-204	ENST00000539463	USP2	O75604	605 aa	Predicted RBP	31.84	■■■□□ 2.69
DENR-204	ENST00000539463	REM2	Q8IYK8	340 aa	Predicted RBP	31.84	■■■□□ 2.69
DENR-204	ENST00000539463	TMOD2	Q9NZR1	351 aa		31.84	■■■□□ 2.69
DENR-204	ENST00000539463	FKBP1C	Q5VVH2	108 aa		31.83	■■■□□ 2.69
DENR-204	ENST00000539463	TNNI3K	Q59H18	835 aa		31.82	■■■□□ 2.68
DENR-204	ENST00000539463	HMG20B	Q9P0W2	317 aa		31.82	■■■□□ 2.68
DENR-204	ENST00000539463	DDX19B	Q9UMR2	479 aa		31.82	■■■□□ 2.68
DENR-204	ENST00000539463	FPGT-TNNI3K	V9GXZ4	949 aa		31.82	■■■□□ 2.68
DENR-204	ENST00000539463	FAM83A	Q86UY5	434 aa		31.81	■■■□□ 2.68
DENR-204	ENST00000539463	SLC10A4	Q96EP9	437 aa		31.81	■■■□□ 2.68
DENR-204	ENST00000539463	RNF186	Q9NXI6	227 aa		31.81	■■■□□ 2.68
DENR-204	ENST00000539463	ABCF2	Q9UG63	623 aa		31.81	■■■□□ 2.68
DENR-204	ENST00000539463	UNCX	A6NJT0	531 aa		31.8	■■■□□ 2.68
DENR-204	ENST00000539463	ARID4A	P29374	1257 aa	Predicted RBP	31.8	■■■□□ 2.68
DENR-204	ENST00000539463	IREB2	P48200	963 aa	Known RBP	31.8	■■■□□ 2.68
DENR-204	ENST00000539463	MKRN3	Q13064	507 aa	Known RBP	31.8	■■■□□ 2.68
DENR-204	ENST00000539463	SPATA5	Q8NB90	893 aa		31.8	■■■□□ 2.68
DENR-204	ENST00000539463	CLMN	Q96JQ2	1002 aa		31.8	■■■□□ 2.68
DENR-204	ENST00000539463	ZBTB40	Q9NUA8	1239 aa		31.8	■■■□□ 2.68
DENR-204	ENST00000539463	SAGE1	Q9NXZ1	904 aa		31.8	■■■□□ 2.68
DENR-204	ENST00000539463	SPTY2D1	Q68D10	685 aa	Predicted RBP	31.79	■■■□□ 2.68
DENR-204	ENST00000539463	CDC42EP5	Q6NZY7	148 aa		31.79	■■■□□ 2.68
DENR-204	ENST00000539463	PI16	Q6UXB8	463 aa		31.79	■■■□□ 2.68
DENR-204	ENST00000539463	SPRYD7	Q5W111	196 aa		31.78	■■■□□ 2.68
DENR-204	ENST00000539463	TRPA1	O75762	1119 aa		31.77	■■■□□ 2.68
DENR-204	ENST00000539463	UQCRFS1P1	P0C7P4	283 aa		31.77	■■■□□ 2.68

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