RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 SNED1Q8TER0 1413 aa10.56□□□□□ -0.72
DDB1-213ENST00000539332 C6orf229H3BNL8 230 aa10.56□□□□□ -0.72
DDB1-213ENST00000539332 XRCC6P12956 609 aaKnown RBP eCLIP10.56□□□□□ -0.72
DDB1-213ENST00000539332 HIBADHP31937 336 aaKnown RBP10.56□□□□□ -0.72
DDB1-213ENST00000539332 MCM2P49736 904 aa10.56□□□□□ -0.72
DDB1-213ENST00000539332 HSP90AA2PQ14568 343 aaPredicted RBP10.56□□□□□ -0.72
DDB1-213ENST00000539332 CC2D2BQ6DHV5 1058 aa10.56□□□□□ -0.72
DDB1-213ENST00000539332 SPATA5Q8NB90 893 aa10.56□□□□□ -0.72
DDB1-213ENST00000539332 TTC14Q96N46 770 aa10.56□□□□□ -0.72
DDB1-213ENST00000539332 NAP1L5Q96NT1 182 aaPredicted RBP10.56□□□□□ -0.72
DDB1-213ENST00000539332 SEC62Q99442 399 aaKnown RBP10.56□□□□□ -0.72
DDB1-213ENST00000539332 DSCC1Q9BVC3 393 aa10.56□□□□□ -0.72
DDB1-213ENST00000539332 GNL3LQ9NVN8 582 aaKnown RBP10.56□□□□□ -0.72
DDB1-213ENST00000539332 HMG20BQ9P0W2 317 aa10.56□□□□□ -0.72
DDB1-213ENST00000539332 ZNF219Q9P2Y4 722 aaPredicted RBP10.56□□□□□ -0.72
DDB1-213ENST00000539332 SLC27A2O14975 620 aa10.55□□□□□ -0.72
DDB1-213ENST00000539332 C21orf2O43822 256 aa10.55□□□□□ -0.72
DDB1-213ENST00000539332 VASPP50552 380 aaPredicted RBP10.55□□□□□ -0.72
DDB1-213ENST00000539332 CREB3L3Q68CJ9 461 aa10.55□□□□□ -0.72
DDB1-213ENST00000539332 APPBP2Q92624 585 aa10.55□□□□□ -0.72
DDB1-213ENST00000539332 IQSEC3Q9UPP2 1182 aaPredicted RBP10.55□□□□□ -0.72
DDB1-213ENST00000539332 U3KPZ7 1027 aaPredicted RBP10.55□□□□□ -0.72
DDB1-213ENST00000539332 FER1L6Q2WGJ9 1857 aa10.55□□□□□ -0.72
DDB1-213ENST00000539332 TPM2P07951 284 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 ADD2P35612 726 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 NEK4P51957 841 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 DALRD3Q5D0E6 543 aaKnown RBP10.54□□□□□ -0.72
DDB1-213ENST00000539332 CCDC129Q6ZRS4 1044 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 ZNF804AQ7Z570 1209 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 OSBP2Q969R2 916 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 SLKQ9H2G2 1235 aaPredicted RBP10.54□□□□□ -0.72
DDB1-213ENST00000539332 PIH1D3Q9NQM4 214 aaKnown RBP10.54□□□□□ -0.72
DDB1-213ENST00000539332 CIZ1Q9ULV3 898 aaPredicted RBP10.54□□□□□ -0.72
DDB1-213ENST00000539332 TIAM2Q8IVF5 1701 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 ARFGEF1Q9Y6D6 1849 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 TCRBV5S4A2TA0A5A2 114 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 M0R2C6 588 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 SEMA3EO15041 775 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 CUL4AQ13619 759 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 UBE3CQ15386 1083 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 SLFNL1Q499Z3 407 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 GRIPAP1Q4V328 841 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 RNF20Q5VTR2 975 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 ZSCAN25Q6NSZ9 544 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 NLGN2Q8NFZ4 835 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 RTFDC1Q9BY42 306 aaPredicted RBP10.54□□□□□ -0.72
DDB1-213ENST00000539332 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.54□□□□□ -0.729e-8■■□□□ 14.2
DDB1-213ENST00000539332 ZSWIM6Q9HCJ5 1215 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 WWC3Q9ULE0 1092 aa10.54□□□□□ -0.72
DDB1-213ENST00000539332 CDK5RAP2Q96SN8 1893 aa10.53□□□□□ -0.72
DDB1-213ENST00000539332 FOXP2O15409 715 aa10.53□□□□□ -0.72
DDB1-213ENST00000539332 ZKSCAN1P17029 563 aaPredicted RBP10.53□□□□□ -0.72
DDB1-213ENST00000539332 CCDC93Q567U6 631 aa10.53□□□□□ -0.72
DDB1-213ENST00000539332 TDRD7Q8NHU6 1098 aaKnown RBP10.53□□□□□ -0.72
DDB1-213ENST00000539332 ZC3H12CQ9C0D7 883 aaKnown RBP10.53□□□□□ -0.72
DDB1-213ENST00000539332 DENND2AQ9ULE3 1009 aa10.53□□□□□ -0.72
DDB1-213ENST00000539332 LAMB1P07942 1786 aa10.53□□□□□ -0.72
DDB1-213ENST00000539332 ZNF646O15015 1829 aaPredicted RBP10.52□□□□□ -0.72
DDB1-213ENST00000539332 SOCS7O14512 581 aa10.52□□□□□ -0.72
DDB1-213ENST00000539332 RIMBP2O15034 1052 aa10.52□□□□□ -0.72
DDB1-213ENST00000539332 TRAK2O60296 914 aa10.52□□□□□ -0.72
DDB1-213ENST00000539332 HSPD1P10809 573 aaKnown RBP10.52□□□□□ -0.72
DDB1-213ENST00000539332 IL1R1P14778 569 aa10.52□□□□□ -0.72
DDB1-213ENST00000539332 PDE6AP16499 860 aa10.52□□□□□ -0.72
DDB1-213ENST00000539332 WASHC4Q2M389 1173 aa10.52□□□□□ -0.72
DDB1-213ENST00000539332 SKOR2Q2VWA4 1001 aaPredicted RBP10.52□□□□□ -0.72
DDB1-213ENST00000539332 ADCK5Q3MIX3 580 aa10.52□□□□□ -0.72
DDB1-213ENST00000539332 SOGA3Q5TF21 947 aa10.52□□□□□ -0.72
DDB1-213ENST00000539332 RTKN2Q8IZC4 609 aa10.52□□□□□ -0.72
DDB1-213ENST00000539332 UPF3BQ9BZI7 483 aaKnown RBP10.52□□□□□ -0.72
DDB1-213ENST00000539332 FHDC1Q9C0D6 1143 aaPredicted RBP10.52□□□□□ -0.72
DDB1-213ENST00000539332 ALDH8A1Q9H2A2 487 aaPredicted RBP10.52□□□□□ -0.72
DDB1-213ENST00000539332 CD209Q9NNX6 404 aa10.52□□□□□ -0.72
DDB1-213ENST00000539332 SCN9AQ15858 1988 aa10.52□□□□□ -0.73
DDB1-213ENST00000539332 KRT32Q14532 448 aa10.52□□□□□ -0.73
DDB1-213ENST00000539332 VPS53Q5VIR6 699 aa10.52□□□□□ -0.73
DDB1-213ENST00000539332 TMX3Q96JJ7 454 aa10.52□□□□□ -0.73
DDB1-213ENST00000539332 EYA3Q99504 573 aa10.52□□□□□ -0.73
DDB1-213ENST00000539332 TAF6LQ9Y6J9 622 aa10.52□□□□□ -0.73
DDB1-213ENST00000539332 MYH2Q9UKX2 1941 aa10.51□□□□□ -0.73
DDB1-213ENST00000539332 BAZ2AQ9UIF9 1905 aaKnown RBP10.51□□□□□ -0.73
DDB1-213ENST00000539332 IDH1O75874 414 aaKnown RBP10.51□□□□□ -0.73
DDB1-213ENST00000539332 CYP21A2P08686 494 aa10.51□□□□□ -0.73
DDB1-213ENST00000539332 CASTP20810 708 aaKnown RBP10.51□□□□□ -0.73
DDB1-213ENST00000539332 SLC9C2Q5TAH2 1124 aa10.51□□□□□ -0.73
DDB1-213ENST00000539332 RUFY3Q7L099 469 aa10.51□□□□□ -0.73
DDB1-213ENST00000539332 SUPT20HQ8NEM7 779 aa10.51□□□□□ -0.73
DDB1-213ENST00000539332 JAKMIP1Q96N16 626 aaKnown RBP10.51□□□□□ -0.73
DDB1-213ENST00000539332 PSMD1Q99460 953 aa10.51□□□□□ -0.73
DDB1-213ENST00000539332 COA1Q9GZY4 146 aa10.51□□□□□ -0.73
DDB1-213ENST00000539332 PUS7LQ9H0K6 701 aaKnown RBP10.51□□□□□ -0.73
DDB1-213ENST00000539332 ZMYM6O95789 1325 aa10.51□□□□□ -0.73
DDB1-213ENST00000539332 GPAA1O43292 621 aa10.5□□□□□ -0.73
DDB1-213ENST00000539332 PSMA5P28066 241 aa10.5□□□□□ -0.73
DDB1-213ENST00000539332 MAP3K12Q12852 859 aa10.5□□□□□ -0.73
DDB1-213ENST00000539332 CHAF1AQ13111 956 aaPredicted RBP10.5□□□□□ -0.73
DDB1-213ENST00000539332 TRIM44Q96DX7 344 aaPredicted RBP10.5□□□□□ -0.73
DDB1-213ENST00000539332 INTS4Q96HW7 963 aaKnown RBP10.5□□□□□ -0.73
DDB1-213ENST00000539332 ABCF2Q9UG63 623 aa10.5□□□□□ -0.73
DDB1-213ENST00000539332 BCS1LQ9Y276 419 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms