RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 ZIC5Q96T25 663 aa11.48□□□□□ -0.57
MRE11-208ENST00000538923 CHMP4AQ9BY43 222 aa11.48□□□□□ -0.57
MRE11-208ENST00000538923 GGA3Q9NZ52 723 aa11.48□□□□□ -0.57
MRE11-208ENST00000538923 DDX60Q8IY21 1712 aaKnown RBP11.47□□□□□ -0.57
MRE11-208ENST00000538923 ZNF609O15014 1411 aa11.47□□□□□ -0.57
MRE11-208ENST00000538923 PDE8AO60658 829 aa11.47□□□□□ -0.57
MRE11-208ENST00000538923 DDX58O95786 925 aaKnown RBP11.47□□□□□ -0.57
MRE11-208ENST00000538923 PCCAP05165 728 aaPredicted RBP11.47□□□□□ -0.57
MRE11-208ENST00000538923 ZNF280AP59817 542 aaPredicted RBP11.47□□□□□ -0.57
MRE11-208ENST00000538923 GNAI1P63096 354 aa11.47□□□□□ -0.57
MRE11-208ENST00000538923 AGBL3Q8NEM8 1001 aa11.47□□□□□ -0.57
MRE11-208ENST00000538923 NLRP7Q8WX94 980 aa11.47□□□□□ -0.57
MRE11-208ENST00000538923 MYD88Q99836 296 aa11.47□□□□□ -0.57
MRE11-208ENST00000538923 PHAXQ9H814 394 aaKnown RBP11.47□□□□□ -0.57
MRE11-208ENST00000538923 SEC31BQ9NQW1 1179 aa11.47□□□□□ -0.57
MRE11-208ENST00000538923 IFT57Q9NWB7 429 aa11.47□□□□□ -0.57
MRE11-208ENST00000538923 XDHP47989 1333 aa11.46□□□□□ -0.57
MRE11-208ENST00000538923 RNF40O75150 1001 aa11.46□□□□□ -0.57
MRE11-208ENST00000538923 SLC10A3P09131 477 aa11.46□□□□□ -0.57
MRE11-208ENST00000538923 KIF23Q02241 960 aaPredicted RBP11.46□□□□□ -0.57
MRE11-208ENST00000538923 SWT1Q5T5J6 900 aaKnown RBP11.46□□□□□ -0.57
MRE11-208ENST00000538923 ANGEL2Q5VTE6 544 aaKnown RBP11.46□□□□□ -0.57
MRE11-208ENST00000538923 RSBN1LQ6PCB5 846 aaPredicted RBP11.46□□□□□ -0.57
MRE11-208ENST00000538923 ANKRD18AQ8IVF6 992 aa11.46□□□□□ -0.57
MRE11-208ENST00000538923 CDCA5Q96FF9 252 aa11.46□□□□□ -0.57
MRE11-208ENST00000538923 PHOX2BQ99453 314 aa11.46□□□□□ -0.57
MRE11-208ENST00000538923 TMEM134Q9H6X4 195 aa11.46□□□□□ -0.57
MRE11-208ENST00000538923 CWC25Q9NXE8 425 aaPredicted RBP11.46□□□□□ -0.57
MRE11-208ENST00000538923 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.46□□□□□ -0.57
MRE11-208ENST00000538923 COL4A1P02462 1669 aa11.46□□□□□ -0.58
MRE11-208ENST00000538923 ELL2O00472 640 aaPredicted RBP11.45□□□□□ -0.58
MRE11-208ENST00000538923 TRPA1O75762 1119 aa11.45□□□□□ -0.58
MRE11-208ENST00000538923 USP17L8P0C7I0 530 aa11.45□□□□□ -0.58
MRE11-208ENST00000538923 ATP2B4P23634 1241 aa11.45□□□□□ -0.58
MRE11-208ENST00000538923 BCAMP50895 628 aa11.45□□□□□ -0.58
MRE11-208ENST00000538923 FKBP1BP68106 108 aa11.45□□□□□ -0.58
MRE11-208ENST00000538923 SCARF1Q14162 830 aa11.45□□□□□ -0.58
MRE11-208ENST00000538923 PODNQ7Z5L7 613 aa11.45□□□□□ -0.58
MRE11-208ENST00000538923 METTL22Q9BUU2 404 aaPredicted RBP11.45□□□□□ -0.58
MRE11-208ENST00000538923 RNF186Q9NXI6 227 aa11.45□□□□□ -0.58
MRE11-208ENST00000538923 ASTN2O75129 1339 aaPredicted RBP11.44□□□□□ -0.58
MRE11-208ENST00000538923 PITPNM2Q9BZ72 1349 aa11.44□□□□□ -0.58
MRE11-208ENST00000538923 USP17L3A6NCW0 530 aa11.44□□□□□ -0.58
MRE11-208ENST00000538923 USP17L4A6NCW7 530 aa11.44□□□□□ -0.58
MRE11-208ENST00000538923 SLC4A3P48751 1232 aa11.44□□□□□ -0.58
MRE11-208ENST00000538923 CCDC30Q5VVM6 783 aa11.44□□□□□ -0.58
MRE11-208ENST00000538923 USP17L1Q7RTZ2 530 aa11.44□□□□□ -0.58
MRE11-208ENST00000538923 CCDC85AQ96PX6 553 aaPredicted RBP11.44□□□□□ -0.58
MRE11-208ENST00000538923 GMLQ99445 158 aa11.44□□□□□ -0.58
MRE11-208ENST00000538923 CDC5LQ99459 802 aaKnown RBP11.44□□□□□ -0.58
MRE11-208ENST00000538923 MYOZ2Q9NPC6 264 aa11.44□□□□□ -0.58
MRE11-208ENST00000538923 SOWAHBA6NEL2 793 aa11.43□□□□□ -0.58
MRE11-208ENST00000538923 APAF1O14727 1248 aa11.43□□□□□ -0.58
MRE11-208ENST00000538923 PRKCSHP14314 528 aaPredicted RBP11.43□□□□□ -0.58
MRE11-208ENST00000538923 CTSWP56202 376 aa11.43□□□□□ -0.58
MRE11-208ENST00000538923 THSD4Q6ZMP0 1018 aa11.43□□□□□ -0.58
MRE11-208ENST00000538923 CSRNP1Q96S65 589 aa11.43□□□□□ -0.58
MRE11-208ENST00000538923 MDM2Q00987 491 aaPredicted RBP11.42□□□□□ -0.58
MRE11-208ENST00000538923 NEXNQ0ZGT2 675 aa11.42□□□□□ -0.58
MRE11-208ENST00000538923 RASAL3Q86YV0 1011 aa11.42□□□□□ -0.58
MRE11-208ENST00000538923 C8orf58Q8NAV2 365 aa11.42□□□□□ -0.58
MRE11-208ENST00000538923 JARID2Q92833 1246 aaPredicted RBP11.42□□□□□ -0.58
MRE11-208ENST00000538923 PRKRIP1Q9H875 184 aaPredicted RBP11.42□□□□□ -0.58
MRE11-208ENST00000538923 BSDC1Q9NW68 430 aaPredicted RBP11.42□□□□□ -0.58
MRE11-208ENST00000538923 MAP3K2Q9Y2U5 619 aa11.42□□□□□ -0.58
MRE11-208ENST00000538923 TAF1P21675 1872 aa11.42□□□□□ -0.58
MRE11-208ENST00000538923 MED23Q9ULK4 1368 aa11.41□□□□□ -0.58
MRE11-208ENST00000538923 MYO3BQ8WXR4 1341 aa11.41□□□□□ -0.58
MRE11-208ENST00000538923 TRIM66O15016 1216 aa11.41□□□□□ -0.58
MRE11-208ENST00000538923 KSR2Q6VAB6 950 aa11.41□□□□□ -0.58
MRE11-208ENST00000538923 CTU1Q7Z7A3 348 aaKnown RBP11.41□□□□□ -0.58
MRE11-208ENST00000538923 SLF2Q8IX21 1173 aa11.41□□□□□ -0.58
MRE11-208ENST00000538923 OGFOD1Q8N543 542 aa11.41□□□□□ -0.58
MRE11-208ENST00000538923 TTLL11Q8NHH1 800 aa11.41□□□□□ -0.58
MRE11-208ENST00000538923 MINPP1Q9UNW1 487 aa11.41□□□□□ -0.58
MRE11-208ENST00000538923 PI4KAP2A4QPH2 592 aa11.4□□□□□ -0.58
MRE11-208ENST00000538923 IGKV5-2P06315 115 aa11.4□□□□□ -0.58
MRE11-208ENST00000538923 MMP14P50281 582 aa11.4□□□□□ -0.58
MRE11-208ENST00000538923 PTPN5P54829 565 aa11.4□□□□□ -0.58
MRE11-208ENST00000538923 TTLL12Q14166 644 aaPredicted RBP11.4□□□□□ -0.58
MRE11-208ENST00000538923 DACT2Q5SW24 774 aa11.4□□□□□ -0.58
MRE11-208ENST00000538923 PI4KAP1Q8N8J0 262 aa11.4□□□□□ -0.58
MRE11-208ENST00000538923 STK31Q9BXU1 1019 aa11.4□□□□□ -0.58
MRE11-208ENST00000538923 COA1Q9GZY4 146 aa11.4□□□□□ -0.58
MRE11-208ENST00000538923 GREM2Q9H772 168 aa11.4□□□□□ -0.58
MRE11-208ENST00000538923 HPS5Q9UPZ3 1129 aa11.4□□□□□ -0.58
MRE11-208ENST00000538923 NF2P35240 595 aa11.39□□□□□ -0.59
MRE11-208ENST00000538923 CLCN1P35523 988 aa11.39□□□□□ -0.59
MRE11-208ENST00000538923 CCT4P50991 539 aaKnown RBP11.39□□□□□ -0.59
MRE11-208ENST00000538923 NBPF9Q3BBW0 867 aa11.39□□□□□ -0.59
MRE11-208ENST00000538923 STRIP1Q5VSL9 837 aa11.39□□□□□ -0.59
MRE11-208ENST00000538923 TSPYL6Q8N831 410 aa11.39□□□□□ -0.59
MRE11-208ENST00000538923 DAXXQ9UER7 740 aaPredicted RBP11.39□□□□□ -0.59
MRE11-208ENST00000538923 PAPPA2Q9BXP8 1791 aa11.39□□□□□ -0.59
MRE11-208ENST00000538923 WTIPA6NIX2 430 aaPredicted RBP11.38□□□□□ -0.59
MRE11-208ENST00000538923 IGHMBP2P38935 993 aaKnown RBP11.38□□□□□ -0.59
MRE11-208ENST00000538923 PKN2Q16513 984 aaKnown RBP11.38□□□□□ -0.59
MRE11-208ENST00000538923 AMHR2Q16671 573 aa11.38□□□□□ -0.59
MRE11-208ENST00000538923 MOB2Q70IA6 237 aa11.38□□□□□ -0.59
MRE11-208ENST00000538923 SCAF8Q9UPN6 1271 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms