RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	CRK	P46108	304 aa		15.2	■□□□□ 0.02
CLTCL1-205	ENST00000538828	TFCP2	Q12800	502 aa		15.2	■□□□□ 0.02
CLTCL1-205	ENST00000538828	MAP3K11	Q16584	847 aa		15.2	■□□□□ 0.02
CLTCL1-205	ENST00000538828	RGMB	Q6NW40	437 aa		15.2	■□□□□ 0.02
CLTCL1-205	ENST00000538828	CEP85	Q6P2H3	762 aa		15.2	■□□□□ 0.02
CLTCL1-205	ENST00000538828	RPAP2	Q8IXW5	612 aa	Predicted RBP	15.2	■□□□□ 0.02
CLTCL1-205	ENST00000538828	PANK1	Q8TE04	598 aa		15.2	■□□□□ 0.02
CLTCL1-205	ENST00000538828	TEKT1	Q969V4	418 aa		15.2	■□□□□ 0.02
CLTCL1-205	ENST00000538828	DEFB129	Q9H1M3	183 aa		15.2	■□□□□ 0.02
CLTCL1-205	ENST00000538828		F8W031	263 aa	Predicted RBP	15.19	■□□□□ 0.02
CLTCL1-205	ENST00000538828	CA12	O43570	354 aa		15.19	■□□□□ 0.02
CLTCL1-205	ENST00000538828	PHKA1	P46020	1223 aa		15.19	■□□□□ 0.02
CLTCL1-205	ENST00000538828	CHAF1A	Q13111	956 aa	Predicted RBP	15.19	■□□□□ 0.02
CLTCL1-205	ENST00000538828	SUPT20HL1	Q3ZLR7	823 aa		15.19	■□□□□ 0.02
CLTCL1-205	ENST00000538828	HSP90AB4P	Q58FF6	505 aa		15.19	■□□□□ 0.02
CLTCL1-205	ENST00000538828	CYP4F22	Q6NT55	531 aa		15.19	■□□□□ 0.02
CLTCL1-205	ENST00000538828	XAGE2	Q96GT9	111 aa		15.19	■□□□□ 0.02
CLTCL1-205	ENST00000538828	ZBTB40	Q9NUA8	1239 aa		15.19	■□□□□ 0.02
CLTCL1-205	ENST00000538828	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	15.19	■□□□□ 0.02
CLTCL1-205	ENST00000538828	JAG2	Q9Y219	1238 aa		15.19	■□□□□ 0.02
CLTCL1-205	ENST00000538828	RBM5	P52756	815 aa	Known RBP eCLIP	15.18	■□□□□ 0.02
CLTCL1-205	ENST00000538828	TIMM10	P62072	90 aa		15.18	■□□□□ 0.02
CLTCL1-205	ENST00000538828	ARMC9	Q7Z3E5	817 aa		15.18	■□□□□ 0.02
CLTCL1-205	ENST00000538828	ERC1	Q8IUD2	1116 aa		15.18	■□□□□ 0.02
CLTCL1-205	ENST00000538828	ZNF512B	Q96KM6	892 aa	Predicted RBP	15.18	■□□□□ 0.02
CLTCL1-205	ENST00000538828	ZNF70	Q9UC06	446 aa	Predicted RBP	15.18	■□□□□ 0.02
CLTCL1-205	ENST00000538828	FAM155A	B1AL88	458 aa	Predicted RBP	15.17	■□□□□ 0.02
CLTCL1-205	ENST00000538828	HMMR	O75330	724 aa		15.17	■□□□□ 0.02
CLTCL1-205	ENST00000538828	SURF6	O75683	361 aa	Known RBP	15.17	■□□□□ 0.02
CLTCL1-205	ENST00000538828	UQCRFS1P1	P0C7P4	283 aa		15.17	■□□□□ 0.02
CLTCL1-205	ENST00000538828	ARID4A	P29374	1257 aa	Predicted RBP	15.17	■□□□□ 0.02
CLTCL1-205	ENST00000538828	TNNI2	P48788	182 aa		15.17	■□□□□ 0.02
CLTCL1-205	ENST00000538828	SPTY2D1	Q68D10	685 aa	Predicted RBP	15.17	■□□□□ 0.02
CLTCL1-205	ENST00000538828	DLK2	Q6UY11	383 aa		15.17	■□□□□ 0.02
CLTCL1-205	ENST00000538828	FAM83A	Q86UY5	434 aa		15.17	■□□□□ 0.02
CLTCL1-205	ENST00000538828	SLF2	Q8IX21	1173 aa		15.17	■□□□□ 0.02
CLTCL1-205	ENST00000538828	AIDA	Q96BJ3	306 aa		15.17	■□□□□ 0.02
CLTCL1-205	ENST00000538828	FAM163A	Q96GL9	167 aa	Predicted RBP	15.17	■□□□□ 0.02
CLTCL1-205	ENST00000538828	PRDM10	Q9NQV6	1147 aa		15.17	■□□□□ 0.02
CLTCL1-205	ENST00000538828	PPP1R12B	O60237	982 aa	Predicted RBP	15.16	■□□□□ 0.02
CLTCL1-205	ENST00000538828	LDHB	P07195	334 aa	Known RBP	15.16	■□□□□ 0.02
CLTCL1-205	ENST00000538828	SLC10A3	P09131	477 aa		15.16	■□□□□ 0.02
CLTCL1-205	ENST00000538828	ADORA1	P30542	326 aa		15.16	■□□□□ 0.02
CLTCL1-205	ENST00000538828	CTCF	P49711	727 aa	Predicted RBP	15.16	■□□□□ 0.02
CLTCL1-205	ENST00000538828	RASGRF1	Q13972	1273 aa		15.16	■□□□□ 0.02
CLTCL1-205	ENST00000538828	GRIK5	Q16478	980 aa		15.16	■□□□□ 0.02
CLTCL1-205	ENST00000538828	TNNI3K	Q59H18	835 aa		15.16	■□□□□ 0.02
CLTCL1-205	ENST00000538828	LDLRAD1	Q5T700	205 aa		15.16	■□□□□ 0.02
CLTCL1-205	ENST00000538828	APOBEC3H	Q6NTF7	200 aa	Known RBP	15.16	■□□□□ 0.02
CLTCL1-205	ENST00000538828	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	15.16	■□□□□ 0.02
CLTCL1-205	ENST00000538828	FPGT-TNNI3K	V9GXZ4	949 aa		15.16	■□□□□ 0.02
CLTCL1-205	ENST00000538828	RPAP1	Q9BWH6	1393 aa	Predicted RBP	15.15	■□□□□ 0.02
CLTCL1-205	ENST00000538828	MAP4K4	O95819	1239 aa	Predicted RBP	15.15	■□□□□ 0.02
CLTCL1-205	ENST00000538828	ZNF157	P51786	506 aa	Predicted RBP	15.15	■□□□□ 0.02
CLTCL1-205	ENST00000538828	OS9	Q13438	667 aa	Predicted RBP	15.15	■□□□□ 0.02
CLTCL1-205	ENST00000538828	RASA3	Q14644	834 aa		15.15	■□□□□ 0.02
CLTCL1-205	ENST00000538828	HOOK2	Q96ED9	719 aa		15.15	■□□□□ 0.02
CLTCL1-205	ENST00000538828	NEUROD6	Q96NK8	337 aa		15.15	■□□□□ 0.02
CLTCL1-205	ENST00000538828	BEGAIN	Q9BUH8	593 aa		15.15	■□□□□ 0.02
CLTCL1-205	ENST00000538828	TDRD3	Q9H7E2	651 aa	Known RBP	15.15	■□□□□ 0.02
CLTCL1-205	ENST00000538828	TMOD2	Q9NZR1	351 aa		15.15	■□□□□ 0.02
CLTCL1-205	ENST00000538828	COG6	Q9Y2V7	657 aa		15.15	■□□□□ 0.02
CLTCL1-205	ENST00000538828	PCDHAC2	Q9Y5I4	1007 aa		15.15	■□□□□ 0.02
CLTCL1-205	ENST00000538828	PRDX5	P30044	214 aa		15.14	■□□□□ 0.01
CLTCL1-205	ENST00000538828	CCDC158	Q5M9N0	1113 aa		15.14	■□□□□ 0.01
CLTCL1-205	ENST00000538828	GORAB	Q5T7V8	394 aa		15.14	■□□□□ 0.01
CLTCL1-205	ENST00000538828	TMED8	Q6PL24	325 aa	Predicted RBP	15.14	■□□□□ 0.01
CLTCL1-205	ENST00000538828	C1orf115	Q9H7X2	142 aa		15.14	■□□□□ 0.01
CLTCL1-205	ENST00000538828	VEZT	Q9HBM0	779 aa		15.14	■□□□□ 0.01
CLTCL1-205	ENST00000538828	GAK	O14976	1311 aa		15.14	■□□□□ 0.01
CLTCL1-205	ENST00000538828	CLRN2	A0PK11	232 aa		15.13	■□□□□ 0.01
CLTCL1-205	ENST00000538828	TEPSIN	Q96N21	525 aa		15.13	■□□□□ 0.01
CLTCL1-205	ENST00000538828	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	15.13	■□□□□ 0.01
CLTCL1-205	ENST00000538828	FOXN1	O15353	648 aa		15.12	■□□□□ 0.01
CLTCL1-205	ENST00000538828	RAB11FIP3	O75154	756 aa		15.12	■□□□□ 0.01
CLTCL1-205	ENST00000538828	PRAMEF18	Q5VWM3	479 aa		15.12	■□□□□ 0.01
CLTCL1-205	ENST00000538828	RASAL3	Q86YV0	1011 aa		15.12	■□□□□ 0.01
CLTCL1-205	ENST00000538828	SPATA5	Q8NB90	893 aa		15.12	■□□□□ 0.01
CLTCL1-205	ENST00000538828	SAGE1	Q9NXZ1	904 aa		15.12	■□□□□ 0.01
CLTCL1-205	ENST00000538828	HMG20B	Q9P0W2	317 aa		15.12	■□□□□ 0.01
CLTCL1-205	ENST00000538828	DAGLA	Q9Y4D2	1042 aa		15.12	■□□□□ 0.01
CLTCL1-205	ENST00000538828	AOX1	Q06278	1338 aa		15.12	■□□□□ 0.01
CLTCL1-205	ENST00000538828	MYH2	Q9UKX2	1941 aa		15.11	■□□□□ 0.01
CLTCL1-205	ENST00000538828	SSC5D	A1L4H1	1573 aa		15.11	■□□□□ 0.01
CLTCL1-205	ENST00000538828	UBE2Q2L	H0YL09	131 aa		15.11	■□□□□ 0.01
CLTCL1-205	ENST00000538828	AOC2	O75106	756 aa		15.11	■□□□□ 0.01
CLTCL1-205	ENST00000538828	NPM3	O75607	178 aa	Known RBP	15.11	■□□□□ 0.01
CLTCL1-205	ENST00000538828	LDHC	P07864	332 aa		15.11	■□□□□ 0.01
CLTCL1-205	ENST00000538828	IREB2	P48200	963 aa	Known RBP	15.11	■□□□□ 0.01
CLTCL1-205	ENST00000538828	GSTO1	P78417	241 aa		15.11	■□□□□ 0.01
CLTCL1-205	ENST00000538828	TTLL12	Q14166	644 aa	Predicted RBP	15.11	■□□□□ 0.01
CLTCL1-205	ENST00000538828	ERICH6	Q7L0X2	663 aa		15.11	■□□□□ 0.01
CLTCL1-205	ENST00000538828	KIF1BP	Q96EK5	621 aa		15.11	■□□□□ 0.01
CLTCL1-205	ENST00000538828	AKAP11	Q9UKA4	1901 aa		15.1	■□□□□ 0.01
CLTCL1-205	ENST00000538828	ZBTB48	P10074	688 aa	Predicted RBP	15.1	■□□□□ 0.01
CLTCL1-205	ENST00000538828	MCAM	P43121	646 aa		15.1	■□□□□ 0.01
CLTCL1-205	ENST00000538828	INHBE	P58166	350 aa		15.1	■□□□□ 0.01
CLTCL1-205	ENST00000538828	NBPF12	Q5TAG4	269 aa	Predicted RBP	15.1	■□□□□ 0.01
CLTCL1-205	ENST00000538828	DZIP1	Q86YF9	867 aa	Known RBP	15.1	■□□□□ 0.01
CLTCL1-205	ENST00000538828	ANKRD13A	Q8IZ07	590 aa		15.1	■□□□□ 0.01

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