RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 IDH1O75874 414 aaKnown RBP13.94□□□□□ -0.18
CPNE8-203ENST00000538596 APPP05067 770 aa13.94□□□□□ -0.18
CPNE8-203ENST00000538596 TPD52L1Q16890 204 aaPredicted RBP13.94□□□□□ -0.18
CPNE8-203ENST00000538596 MYSM1Q5VVJ2 828 aa13.94□□□□□ -0.18
CPNE8-203ENST00000538596 CYB5R4Q7L1T6 521 aa13.94□□□□□ -0.18
CPNE8-203ENST00000538596 TICAM2Q86XR7 235 aa13.94□□□□□ -0.18
CPNE8-203ENST00000538596 PIH1D3Q9NQM4 214 aaKnown RBP13.94□□□□□ -0.18
CPNE8-203ENST00000538596 CNNM1Q9NRU3 951 aa13.94□□□□□ -0.18
CPNE8-203ENST00000538596 TOGARAM1Q9Y4F4 1720 aa13.94□□□□□ -0.18
CPNE8-203ENST00000538596 MARCKSP29966 332 aaPredicted RBP13.93□□□□□ -0.18
CPNE8-203ENST00000538596 CDC25BP30305 580 aa13.93□□□□□ -0.18
CPNE8-203ENST00000538596 TRIM28Q13263 835 aaKnown RBP13.93□□□□□ -0.18
CPNE8-203ENST00000538596 NAA30Q147X3 362 aaPredicted RBP13.93□□□□□ -0.18
CPNE8-203ENST00000538596 LRRFIP1Q32MZ4 808 aaKnown RBP13.93□□□□□ -0.18
CPNE8-203ENST00000538596 ISM2Q6H9L7 571 aa13.93□□□□□ -0.18
CPNE8-203ENST00000538596 HELBQ8NG08 1087 aaPredicted RBP13.93□□□□□ -0.18
CPNE8-203ENST00000538596 MRFAP1L1Q96HT8 127 aa13.93□□□□□ -0.18
CPNE8-203ENST00000538596 NEDD4P46934 1319 aa13.93□□□□□ -0.18
CPNE8-203ENST00000538596 UBE2Q2LH0YL09 131 aa13.93□□□□□ -0.18
CPNE8-203ENST00000538596 SNAP23O00161 211 aa13.93□□□□□ -0.18
CPNE8-203ENST00000538596 SPTLC2O15270 562 aa13.93□□□□□ -0.18
CPNE8-203ENST00000538596 CEP57L1Q8IYX8 460 aa13.93□□□□□ -0.18
CPNE8-203ENST00000538596 ZNF592Q92610 1267 aa13.93□□□□□ -0.18
CPNE8-203ENST00000538596 CCDC94Q9BW85 323 aaPredicted RBP13.93□□□□□ -0.18
CPNE8-203ENST00000538596 PRDM10Q9NQV6 1147 aa13.93□□□□□ -0.18
CPNE8-203ENST00000538596 PPP4R3BQ5MIZ7 849 aa13.93□□□□□ -0.18
CPNE8-203ENST00000538596 NLRP10Q86W26 655 aa13.93□□□□□ -0.18
CPNE8-203ENST00000538596 PHKBQ93100 1093 aa13.93□□□□□ -0.18
CPNE8-203ENST00000538596 AKAP11Q9UKA4 1901 aa13.92□□□□□ -0.18
CPNE8-203ENST00000538596 ADD2P35612 726 aa13.92□□□□□ -0.18
CPNE8-203ENST00000538596 PHKA1P46020 1223 aa13.92□□□□□ -0.18
CPNE8-203ENST00000538596 KIF23Q02241 960 aaPredicted RBP13.92□□□□□ -0.18
CPNE8-203ENST00000538596 GIGYF2Q6Y7W6 1299 aaKnown RBP13.92□□□□□ -0.18
CPNE8-203ENST00000538596 SLC4A9Q96Q91 983 aa13.92□□□□□ -0.18
CPNE8-203ENST00000538596 MYL10Q9BUA6 226 aa13.92□□□□□ -0.18
CPNE8-203ENST00000538596 PLA2G12BQ9BX93 195 aa13.92□□□□□ -0.18
CPNE8-203ENST00000538596 WWC3Q9ULE0 1092 aa13.92□□□□□ -0.18
CPNE8-203ENST00000538596 MAP3K15Q6ZN16 1313 aa13.92□□□□□ -0.18
CPNE8-203ENST00000538596 CCDC69A6NI79 296 aa13.92□□□□□ -0.18
CPNE8-203ENST00000538596 B4E1Z4 1266 aa13.92□□□□□ -0.18
CPNE8-203ENST00000538596 DHX16O60231 1041 aaKnown RBP13.92□□□□□ -0.18
CPNE8-203ENST00000538596 WDHD1O75717 1129 aaPredicted RBP13.92□□□□□ -0.18
CPNE8-203ENST00000538596 SKILP12757 684 aa13.92□□□□□ -0.18
CPNE8-203ENST00000538596 POLR3EQ9NVU0 708 aa13.92□□□□□ -0.18
CPNE8-203ENST00000538596 TRMT1Q9NXH9 659 aaKnown RBP13.92□□□□□ -0.18
CPNE8-203ENST00000538596 KIAA1468Q9P260 1216 aa13.92□□□□□ -0.18
CPNE8-203ENST00000538596 A0A1W2PQ27 194 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 A0A1W2PQ64 194 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 A0A1W2PQD8 194 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 CTIFO43310 598 aaKnown RBP13.91□□□□□ -0.18
CPNE8-203ENST00000538596 CDC27P30260 824 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 SYNE3Q6ZMZ3 975 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 NBPF11Q86T75 865 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 MICU3Q86XE3 530 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 FBXO3Q9UK99 471 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 MROH7-TTC4A0A0A0MT08 1334 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 ZNF532Q9HCE3 1301 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 MYH7P12883 1935 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 IRS4O14654 1257 aaPredicted RBP13.91□□□□□ -0.18
CPNE8-203ENST00000538596 ZNF202O95125 648 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 CTSWP56202 376 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 AXDND1Q5T1B0 1012 aaPredicted RBP13.91□□□□□ -0.18
CPNE8-203ENST00000538596 ANO1Q5XXA6 986 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 VGLL2Q8N8G2 317 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 KCNG4Q8TDN1 519 aa13.91□□□□□ -0.18
CPNE8-203ENST00000538596 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.91□□□□□ -0.18
CPNE8-203ENST00000538596 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.18
CPNE8-203ENST00000538596 ANKRD18BA2A2Z9 1011 aa13.9□□□□□ -0.18
CPNE8-203ENST00000538596 STARD3NLO95772 234 aa13.9□□□□□ -0.18
CPNE8-203ENST00000538596 CBX1P83916 185 aa13.9□□□□□ -0.18
CPNE8-203ENST00000538596 CCZ1BP86790 482 aa13.9□□□□□ -0.18
CPNE8-203ENST00000538596 CCZ1P86791 482 aaPredicted RBP13.9□□□□□ -0.18
CPNE8-203ENST00000538596 TRMT112Q9UI30 125 aaKnown RBP13.9□□□□□ -0.18
CPNE8-203ENST00000538596 TBC1D2BQ9UPU7 963 aa13.9□□□□□ -0.18
CPNE8-203ENST00000538596 YEATS4O95619 227 aa13.9□□□□□ -0.18
CPNE8-203ENST00000538596 PFKFB1P16118 471 aa13.9□□□□□ -0.18
CPNE8-203ENST00000538596 TRDNQ13061 729 aa13.9□□□□□ -0.18
CPNE8-203ENST00000538596 CCDC102BQ68D86 513 aa13.9□□□□□ -0.18
CPNE8-203ENST00000538596 ANGEL1Q9UNK9 670 aaKnown RBP13.9□□□□□ -0.18
CPNE8-203ENST00000538596 ZBTB1Q9Y2K1 713 aa13.9□□□□□ -0.18
CPNE8-203ENST00000538596 SPDYE4A6NLX3 237 aa13.89□□□□□ -0.19
CPNE8-203ENST00000538596 METAP2P50579 478 aaKnown RBP eCLIP13.89□□□□□ -0.19
CPNE8-203ENST00000538596 PDCL2Q8N4E4 241 aa13.89□□□□□ -0.19
CPNE8-203ENST00000538596 ALG1Q9BT22 464 aa13.89□□□□□ -0.19
CPNE8-203ENST00000538596 SLC3A2P08195 630 aaKnown RBP13.89□□□□□ -0.19
CPNE8-203ENST00000538596 PDE6AP16499 860 aa13.89□□□□□ -0.19
CPNE8-203ENST00000538596 NCBP1Q09161 790 aaKnown RBP13.89□□□□□ -0.19
CPNE8-203ENST00000538596 BRAPQ7Z569 592 aa13.89□□□□□ -0.19
CPNE8-203ENST00000538596 STK11IPQ8N1F8 1099 aa13.89□□□□□ -0.19
CPNE8-203ENST00000538596 SYTL4Q96C24 671 aaPredicted RBP13.89□□□□□ -0.19
CPNE8-203ENST00000538596 CHMP4CQ96CF2 233 aa13.89□□□□□ -0.19
CPNE8-203ENST00000538596 NAT10Q9H0A0 1025 aaKnown RBP13.89□□□□□ -0.19
CPNE8-203ENST00000538596 SMTNL1A8MU46 457 aa13.89□□□□□ -0.19
CPNE8-203ENST00000538596 SH2B2O14492 632 aaPredicted RBP13.89□□□□□ -0.19
CPNE8-203ENST00000538596 PDE8BO95263 885 aa13.89□□□□□ -0.19
CPNE8-203ENST00000538596 ZRSR1Q15695 479 aaKnown RBP13.89□□□□□ -0.19
CPNE8-203ENST00000538596 CEP135Q66GS9 1140 aa13.89□□□□□ -0.19
CPNE8-203ENST00000538596 VPS37DQ86XT2 251 aa13.89□□□□□ -0.19
CPNE8-203ENST00000538596 ANKRD7Q92527 254 aa13.89□□□□□ -0.19
CPNE8-203ENST00000538596 XPO4Q9C0E2 1151 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms