RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 TDRD3Q9H7E2 651 aaKnown RBP10.41□□□□□ -0.74
SPARC-208ENST00000538026 TLR7Q9NYK1 1049 aaKnown RBP10.41□□□□□ -0.74
SPARC-208ENST00000538026 BRCA2P51587 3418 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 THSD7BQ9C0I4 1608 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 HUNKP57058 714 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 HDLBPQ00341 1268 aaKnown RBP10.4□□□□□ -0.74
SPARC-208ENST00000538026 DIXDC1Q155Q3 683 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 SPDYE2Q495Y8 402 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 TNNI3KQ59H18 835 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 TBC1D22AQ8WUA7 517 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 HHIPL1Q96JK4 782 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 ZDHHC15Q96MV8 337 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 TEPSINQ96N21 525 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 NEUROD6Q96NK8 337 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 DBNDD2Q9BQY9 259 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 MRIQ9BWK5 157 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 DEFB129Q9H1M3 183 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 GBA2Q9HCG7 927 aaPredicted RBP10.4□□□□□ -0.74
SPARC-208ENST00000538026 GPR108Q9NPR9 543 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 HMG20BQ9P0W2 317 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 ZNF70Q9UC06 446 aaPredicted RBP10.4□□□□□ -0.74
SPARC-208ENST00000538026 DBNLQ9UJU6 430 aaKnown RBP10.4□□□□□ -0.74
SPARC-208ENST00000538026 DDX19BQ9UMR2 479 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 EXOC6BQ9Y2D4 811 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 FPGT-TNNI3KV9GXZ4 949 aa10.4□□□□□ -0.74
SPARC-208ENST00000538026 SALL1Q9NSC2 1324 aa10.39□□□□□ -0.75
SPARC-208ENST00000538026 UBE2Q2LH0YL09 131 aa10.39□□□□□ -0.75
SPARC-208ENST00000538026 FRAT2O75474 233 aaPredicted RBP10.39□□□□□ -0.75
SPARC-208ENST00000538026 HSPA1AP0DMV8 641 aaKnown RBP10.39□□□□□ -0.75
SPARC-208ENST00000538026 HSPA1BP0DMV9 641 aaKnown RBP10.39□□□□□ -0.75
SPARC-208ENST00000538026 MS4A1P11836 297 aa10.39□□□□□ -0.75
SPARC-208ENST00000538026 ARID4AP29374 1257 aaPredicted RBP10.39□□□□□ -0.75
SPARC-208ENST00000538026 MCAMP43121 646 aa10.39□□□□□ -0.75
SPARC-208ENST00000538026 CACNB3P54284 484 aa10.39□□□□□ -0.75
SPARC-208ENST00000538026 RASA3Q14644 834 aa10.39□□□□□ -0.75
SPARC-208ENST00000538026 NBPF12Q5TAG4 269 aaPredicted RBP10.39□□□□□ -0.75
SPARC-208ENST00000538026 TBC1D9Q6ZT07 1266 aa10.39□□□□□ -0.75
SPARC-208ENST00000538026 WDR66Q8TBY9 1149 aa10.39□□□□□ -0.75
SPARC-208ENST00000538026 WBP1LQ9NX94 342 aa10.39□□□□□ -0.75
SPARC-208ENST00000538026 AKAP2Q9Y2D5 859 aa10.39□□□□□ -0.75
SPARC-208ENST00000538026 SUGT1Q9Y2Z0 365 aa10.39□□□□□ -0.75
SPARC-208ENST00000538026 PAPPA2Q9BXP8 1791 aa10.39□□□□□ -0.75
SPARC-208ENST00000538026 SEMA3EO15041 775 aa10.38□□□□□ -0.75
SPARC-208ENST00000538026 RBM5P52756 815 aaKnown RBP eCLIP10.38□□□□□ -0.75
SPARC-208ENST00000538026 LDLRAD1Q5T700 205 aa10.38□□□□□ -0.75
SPARC-208ENST00000538026 HHIPL2Q6UWX4 724 aa10.38□□□□□ -0.75
SPARC-208ENST00000538026 APOBEC3FQ8IUX4 373 aaKnown RBP10.38□□□□□ -0.75
SPARC-208ENST00000538026 CCDC8Q9H0W5 538 aaPredicted RBP10.38□□□□□ -0.75
SPARC-208ENST00000538026 DENND2AQ9ULE3 1009 aa10.38□□□□□ -0.75
SPARC-208ENST00000538026 DAGLAQ9Y4D2 1042 aa10.38□□□□□ -0.75
SPARC-208ENST00000538026 PCDHB15Q9Y5E8 787 aa10.38□□□□□ -0.75
SPARC-208ENST00000538026 PDS5AQ29RF7 1337 aaKnown RBP10.37□□□□□ -0.75
SPARC-208ENST00000538026 FOXN1O15353 648 aa10.37□□□□□ -0.75
SPARC-208ENST00000538026 RRP1P56182 461 aaKnown RBP10.37□□□□□ -0.75
SPARC-208ENST00000538026 RGMBQ6NW40 437 aa10.37□□□□□ -0.75
SPARC-208ENST00000538026 CDC42EP5Q6NZY7 148 aa10.37□□□□□ -0.75
SPARC-208ENST00000538026 ZFPM1Q8IX07 1006 aa10.37□□□□□ -0.75
SPARC-208ENST00000538026 RPAP2Q8IXW5 612 aaPredicted RBP10.37□□□□□ -0.75
SPARC-208ENST00000538026 C2orf69Q8N8R5 385 aa10.37□□□□□ -0.75
SPARC-208ENST00000538026 TEKT1Q969V4 418 aa10.37□□□□□ -0.75
SPARC-208ENST00000538026 TMEM39BQ9GZU3 492 aa10.37□□□□□ -0.75
SPARC-208ENST00000538026 VEZTQ9HBM0 779 aa10.37□□□□□ -0.75
SPARC-208ENST00000538026 SNRKQ9NRH2 765 aa10.37□□□□□ -0.75
SPARC-208ENST00000538026 GNL3LQ9NVN8 582 aaKnown RBP10.37□□□□□ -0.75
SPARC-208ENST00000538026 GAKO14976 1311 aa10.36□□□□□ -0.75
SPARC-208ENST00000538026 TCP10L2B9ZVM9 353 aa10.36□□□□□ -0.75
SPARC-208ENST00000538026 USP2O75604 605 aaPredicted RBP10.36□□□□□ -0.75
SPARC-208ENST00000538026 CYP2E1P05181 493 aaPredicted RBP10.36□□□□□ -0.75
SPARC-208ENST00000538026 NFIAQ12857 509 aa10.36□□□□□ -0.75
SPARC-208ENST00000538026 GRM1Q13255 1194 aa10.36□□□□□ -0.75
SPARC-208ENST00000538026 PRKG1Q13976 671 aa10.36□□□□□ -0.75
SPARC-208ENST00000538026 SPATA5Q8NB90 893 aa10.36□□□□□ -0.75
SPARC-208ENST00000538026 RHPN1Q8TCX5 695 aa10.36□□□□□ -0.75
SPARC-208ENST00000538026 FAM163AQ96GL9 167 aaPredicted RBP10.36□□□□□ -0.75
SPARC-208ENST00000538026 IL1RAPL2Q9NP60 686 aa10.36□□□□□ -0.75
SPARC-208ENST00000538026 FAM198AQ9UFP1 575 aa10.36□□□□□ -0.75
SPARC-208ENST00000538026 NDUFB9Q9Y6M9 179 aa10.36□□□□□ -0.75
SPARC-208ENST00000538026 MKI67P46013 3256 aaKnown RBP10.36□□□□□ -0.75
SPARC-208ENST00000538026 OTOFQ9HC10 1997 aa10.35□□□□□ -0.75
SPARC-208ENST00000538026 LDHBP07195 334 aaKnown RBP10.35□□□□□ -0.75
SPARC-208ENST00000538026 SLC10A3P09131 477 aa10.35□□□□□ -0.75
SPARC-208ENST00000538026 SLURP2P0DP57 97 aa10.35□□□□□ -0.75
SPARC-208ENST00000538026 MAP2K2P36507 400 aa10.35□□□□□ -0.75
SPARC-208ENST00000538026 FKBP1BP68106 108 aa10.35□□□□□ -0.75
SPARC-208ENST00000538026 MECOMQ03112 1051 aa10.35□□□□□ -0.75
SPARC-208ENST00000538026 OS9Q13438 667 aaPredicted RBP10.35□□□□□ -0.75
SPARC-208ENST00000538026 MAP3K11Q16584 847 aa10.35□□□□□ -0.75
SPARC-208ENST00000538026 COL13A1Q5TAT6 717 aaPredicted RBP10.35□□□□□ -0.75
SPARC-208ENST00000538026 RASAL3Q86YV0 1011 aa10.35□□□□□ -0.75
SPARC-208ENST00000538026 NSUN4Q96CB9 384 aaKnown RBP10.35□□□□□ -0.75
SPARC-208ENST00000538026 CLMNQ96JQ2 1002 aa10.35□□□□□ -0.75
SPARC-208ENST00000538026 ZNF512BQ96KM6 892 aaPredicted RBP10.35□□□□□ -0.75
SPARC-208ENST00000538026 CRBNQ96SW2 442 aa10.35□□□□□ -0.75
SPARC-208ENST00000538026 CASP8AP2Q9UKL3 1982 aa10.35□□□□□ -0.75
SPARC-208ENST00000538026 RFX7Q2KHR2 1363 aa10.35□□□□□ -0.75
SPARC-208ENST00000538026 SMARCA5O60264 1052 aaPredicted RBP10.34□□□□□ -0.75
SPARC-208ENST00000538026 WDHD1O75717 1129 aaPredicted RBP10.34□□□□□ -0.75
SPARC-208ENST00000538026 GJA5P36382 358 aa10.34□□□□□ -0.75
SPARC-208ENST00000538026 ECE1P42892 770 aa10.34□□□□□ -0.75
SPARC-208ENST00000538026 ZAP70P43403 619 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms