RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 INTS13Q9NVM9 706 aa12.25□□□□□ -0.45
RTN3-208ENST00000537981 ZBTB12Q9Y330 459 aaPredicted RBP12.25□□□□□ -0.45
RTN3-208ENST00000537981 CAMSAP1Q5T5Y3 1602 aa12.24□□□□□ -0.45
RTN3-208ENST00000537981 MROH1Q8NDA8 1641 aa12.24□□□□□ -0.45
RTN3-208ENST00000537981 PLEKHG3A1L390 1219 aa12.24□□□□□ -0.45
RTN3-208ENST00000537981 ZNF202O95125 648 aa12.24□□□□□ -0.45
RTN3-208ENST00000537981 INPP5BP32019 993 aa12.24□□□□□ -0.45
RTN3-208ENST00000537981 HSP90B2PQ58FF3 399 aa12.24□□□□□ -0.45
RTN3-208ENST00000537981 SRGAP1Q7Z6B7 1085 aa12.24□□□□□ -0.45
RTN3-208ENST00000537981 TMTC2Q8N394 836 aa12.24□□□□□ -0.45
RTN3-208ENST00000537981 ZSCAN31Q96LW9 406 aaPredicted RBP12.24□□□□□ -0.45
RTN3-208ENST00000537981 FANCLQ9NW38 375 aa12.24□□□□□ -0.45
RTN3-208ENST00000537981 KIAA1522Q9P206 1035 aaPredicted RBP12.24□□□□□ -0.45
RTN3-208ENST00000537981 CDHR2Q9BYE9 1310 aa12.24□□□□□ -0.45
RTN3-208ENST00000537981 ZC3H4Q9UPT8 1303 aaKnown RBP12.24□□□□□ -0.45
RTN3-208ENST00000537981 ANKRD62A6NC57 917 aa12.24□□□□□ -0.45
RTN3-208ENST00000537981 GNAI2P04899 355 aa12.24□□□□□ -0.45
RTN3-208ENST00000537981 ZNF662Q6ZS27 426 aa12.24□□□□□ -0.45
RTN3-208ENST00000537981 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.24□□□□□ -0.45
RTN3-208ENST00000537981 TBC1D22AQ8WUA7 517 aa12.24□□□□□ -0.45
RTN3-208ENST00000537981 EIF3JO75822 258 aaKnown RBP12.23□□□□□ -0.45
RTN3-208ENST00000537981 NDUFA8P51970 172 aa12.23□□□□□ -0.45
RTN3-208ENST00000537981 GUCY1B3Q02153 619 aa12.23□□□□□ -0.45
RTN3-208ENST00000537981 TRDNQ13061 729 aa12.23□□□□□ -0.45
RTN3-208ENST00000537981 MTX1Q13505 466 aa12.23□□□□□ -0.45
RTN3-208ENST00000537981 POM121Q96HA1 1249 aa12.23□□□□□ -0.45
RTN3-208ENST00000537981 VEZTQ9HBM0 779 aa12.23□□□□□ -0.45
RTN3-208ENST00000537981 MAP2P11137 1827 aaKnown RBP12.23□□□□□ -0.45
RTN3-208ENST00000537981 ABCC3O15438 1527 aa12.23□□□□□ -0.45
RTN3-208ENST00000537981 TESPA1A2RU30 521 aaPredicted RBP12.22□□□□□ -0.45
RTN3-208ENST00000537981 H0YHG0 523 aa12.22□□□□□ -0.45
RTN3-208ENST00000537981 IRAK1P51617 712 aa12.22□□□□□ -0.45
RTN3-208ENST00000537981 SARNPP82979 210 aaKnown RBP12.22□□□□□ -0.45
RTN3-208ENST00000537981 NEDD9Q14511 834 aa12.22□□□□□ -0.45
RTN3-208ENST00000537981 MSANTD4Q8NCY6 345 aa12.22□□□□□ -0.45
RTN3-208ENST00000537981 THOC1Q96FV9 657 aaKnown RBP12.22□□□□□ -0.45
RTN3-208ENST00000537981 C3P01024 1663 aa12.22□□□□□ -0.45
RTN3-208ENST00000537981 KLHL33A6NCF5 533 aa12.22□□□□□ -0.45
RTN3-208ENST00000537981 NECTIN1Q15223 517 aa12.22□□□□□ -0.45
RTN3-208ENST00000537981 PDILTQ8N807 584 aa12.22□□□□□ -0.45
RTN3-208ENST00000537981 CABS1Q96KC9 395 aa12.22□□□□□ -0.45
RTN3-208ENST00000537981 SDF4Q9BRK5 362 aa12.22□□□□□ -0.45
RTN3-208ENST00000537981 RBM8AQ9Y5S9 174 aaKnown RBP12.22□□□□□ -0.45
RTN3-208ENST00000537981 GRIN2DO15399 1336 aa12.22□□□□□ -0.45
RTN3-208ENST00000537981 AP1G2O75843 785 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 TUBB4AP04350 444 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 PDHBP11177 359 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 GGCXP38435 758 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 ME1P48163 572 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 FAM160A1Q05DH4 1040 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 CFAP100Q494V2 611 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 CREB3L3Q68CJ9 461 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 CCDC73Q6ZRK6 1079 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 BCAS4Q8TDM0 211 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 FAM227BQ96M60 508 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 LRRC2Q9BYS8 371 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 ODF2LQ9ULJ1 636 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 ADGRL3Q9HAR2 1447 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 EBAG9O00559 213 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 RTN2O75298 545 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 GCFC2P16383 781 aaKnown RBP12.21□□□□□ -0.45
RTN3-208ENST00000537981 PDCP20941 246 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 UBASH3AP57075 661 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 PPARDQ03181 441 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 SNX1Q13596 522 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 ILDR1Q86SU0 546 aaPredicted RBP12.21□□□□□ -0.45
RTN3-208ENST00000537981 TEX11Q8IYF3 940 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 FMR1NBQ8N0W7 255 aaPredicted RBP12.21□□□□□ -0.45
RTN3-208ENST00000537981 ZNF483Q8TF39 744 aaPredicted RBP12.21□□□□□ -0.45
RTN3-208ENST00000537981 XAGE2Q96GT9 111 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 SUGT1Q9Y2Z0 365 aa12.21□□□□□ -0.45
RTN3-208ENST00000537981 CHD2O14647 1828 aaKnown RBP12.21□□□□□ -0.46
RTN3-208ENST00000537981 CARNS1A5YM72 827 aa12.2□□□□□ -0.46
RTN3-208ENST00000537981 SOWAHDA6NJG2 315 aa12.2□□□□□ -0.46
RTN3-208ENST00000537981 H3BQV1 296 aa12.2□□□□□ -0.46
RTN3-208ENST00000537981 ZSCAN12O43309 604 aa12.2□□□□□ -0.46
RTN3-208ENST00000537981 ATP8B2P98198 1209 aa12.2□□□□□ -0.46
RTN3-208ENST00000537981 PDE4DQ08499 809 aa12.2□□□□□ -0.46
RTN3-208ENST00000537981 IFFO2Q5TF58 517 aa12.2□□□□□ -0.46
RTN3-208ENST00000537981 NCAPH2Q6IBW4 605 aa12.2□□□□□ -0.46
RTN3-208ENST00000537981 PARD3BQ8TEW8 1205 aa12.2□□□□□ -0.46
RTN3-208ENST00000537981 BAG1Q99933 345 aaPredicted RBP12.2□□□□□ -0.46
RTN3-208ENST00000537981 CENPHQ9H3R5 247 aa12.2□□□□□ -0.46
RTN3-208ENST00000537981 KIAA1468Q9P260 1216 aa12.2□□□□□ -0.46
RTN3-208ENST00000537981 DDX20Q9UHI6 824 aaKnown RBP12.2□□□□□ -0.46
RTN3-208ENST00000537981 KIF1BO60333 1816 aa12.2□□□□□ -0.46
RTN3-208ENST00000537981 NPATQ14207 1427 aa12.2□□□□□ -0.46
RTN3-208ENST00000537981 ANKRD26Q9UPS8 1709 aa12.2□□□□□ -0.46
RTN3-208ENST00000537981 RPGRIP1LQ68CZ1 1315 aa12.2□□□□□ -0.46
RTN3-208ENST00000537981 AGPSO00116 658 aa12.19□□□□□ -0.46
RTN3-208ENST00000537981 CTAGE5O15320 804 aa12.19□□□□□ -0.46
RTN3-208ENST00000537981 NRDCO43847 1150 aa12.19□□□□□ -0.46
RTN3-208ENST00000537981 SHOX2O60902 331 aaPredicted RBP12.19□□□□□ -0.46
RTN3-208ENST00000537981 SERPINC1P01008 464 aa12.19□□□□□ -0.46
RTN3-208ENST00000537981 MYBL2P10244 700 aa12.19□□□□□ -0.46
RTN3-208ENST00000537981 NF2P35240 595 aa12.19□□□□□ -0.46
RTN3-208ENST00000537981 PREPLQ4J6C6 727 aaPredicted RBP12.19□□□□□ -0.46
RTN3-208ENST00000537981 PROSER2Q86WR7 435 aaPredicted RBP12.19□□□□□ -0.46
RTN3-208ENST00000537981 IQCA1Q86XH1 822 aa12.19□□□□□ -0.46
RTN3-208ENST00000537981 SMARCC1Q92922 1105 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms