RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 ZBTB48P10074 688 aaPredicted RBP12.3□□□□□ -0.44
CCDC170-202ENST00000537358 CHAF1AQ13111 956 aaPredicted RBP12.3□□□□□ -0.44
CCDC170-202ENST00000537358 MAP3K11Q16584 847 aa12.3□□□□□ -0.44
CCDC170-202ENST00000537358 SPRYD7Q5W111 196 aa12.3□□□□□ -0.44
CCDC170-202ENST00000537358 TMOD2Q9NZR1 351 aa12.3□□□□□ -0.44
CCDC170-202ENST00000537358 MAST3O60307 1309 aa12.3□□□□□ -0.44
CCDC170-202ENST00000537358 TBC1D8O95759 1140 aa12.29□□□□□ -0.44
CCDC170-202ENST00000537358 RGS19P49795 217 aa12.29□□□□□ -0.44
CCDC170-202ENST00000537358 RASA3Q14644 834 aa12.29□□□□□ -0.44
CCDC170-202ENST00000537358 PUM3Q15397 648 aaKnown RBP12.29□□□□□ -0.44
CCDC170-202ENST00000537358 LRRC24Q50LG9 513 aa12.29□□□□□ -0.44
CCDC170-202ENST00000537358 NOM1Q5C9Z4 860 aaKnown RBP12.29□□□□□ -0.44
CCDC170-202ENST00000537358 OTUD7BQ6GQQ9 843 aa12.29□□□□□ -0.44
CCDC170-202ENST00000537358 FBXO33Q7Z6M2 555 aa12.29□□□□□ -0.44
CCDC170-202ENST00000537358 DZIP1LQ8IYY4 767 aaKnown RBP12.29□□□□□ -0.44
CCDC170-202ENST00000537358 ANKRD44Q8N8A2 993 aa12.29□□□□□ -0.44
CCDC170-202ENST00000537358 USP44Q9H0E7 712 aa12.29□□□□□ -0.44
CCDC170-202ENST00000537358 GPR25O00155 361 aa12.28□□□□□ -0.44
CCDC170-202ENST00000537358 UBTFL1P0CB47 393 aaPredicted RBP12.28□□□□□ -0.44
CCDC170-202ENST00000537358 SLC5A1P13866 664 aa12.28□□□□□ -0.44
CCDC170-202ENST00000537358 CRKP46108 304 aa12.28□□□□□ -0.44
CCDC170-202ENST00000537358 HDLBPQ00341 1268 aaKnown RBP12.28□□□□□ -0.44
CCDC170-202ENST00000537358 NBPF12Q5TAG4 269 aaPredicted RBP12.28□□□□□ -0.44
CCDC170-202ENST00000537358 ANKRD13AQ8IZ07 590 aa12.28□□□□□ -0.44
CCDC170-202ENST00000537358 ZNF296Q8WUU4 475 aaPredicted RBP12.28□□□□□ -0.44
CCDC170-202ENST00000537358 TEKT1Q969V4 418 aa12.28□□□□□ -0.44
CCDC170-202ENST00000537358 WNK4Q96J92 1243 aa12.28□□□□□ -0.44
CCDC170-202ENST00000537358 ZNF70Q9UC06 446 aaPredicted RBP12.28□□□□□ -0.44
CCDC170-202ENST00000537358 IQSEC3Q9UPP2 1182 aaPredicted RBP12.28□□□□□ -0.44
CCDC170-202ENST00000537358 PCDHAC2Q9Y5I4 1007 aa12.28□□□□□ -0.44
CCDC170-202ENST00000537358 KIF16BQ96L93 1317 aa12.28□□□□□ -0.44
CCDC170-202ENST00000537358 FKTNO75072 461 aa12.27□□□□□ -0.45
CCDC170-202ENST00000537358 HOOK2Q96ED9 719 aa12.27□□□□□ -0.45
CCDC170-202ENST00000537358 CFHR5Q9BXR6 569 aa12.27□□□□□ -0.45
CCDC170-202ENST00000537358 API5Q9BZZ5 524 aaKnown RBP12.27□□□□□ -0.45
CCDC170-202ENST00000537358 TDRD3Q9H7E2 651 aaKnown RBP12.27□□□□□ -0.45
CCDC170-202ENST00000537358 FZD1Q9UP38 647 aa12.27□□□□□ -0.45
CCDC170-202ENST00000537358 SUGT1Q9Y2Z0 365 aa12.27□□□□□ -0.45
CCDC170-202ENST00000537358 TCP10L2B9ZVM9 353 aa12.26□□□□□ -0.45
CCDC170-202ENST00000537358 EYA2O00167 538 aa12.26□□□□□ -0.45
CCDC170-202ENST00000537358 BCAMP50895 628 aa12.26□□□□□ -0.45
CCDC170-202ENST00000537358 VGLL2Q8N8G2 317 aa12.26□□□□□ -0.45
CCDC170-202ENST00000537358 KLHDC4Q8TBB5 520 aa12.26□□□□□ -0.45
CCDC170-202ENST00000537358 LPIN2Q92539 896 aa12.26□□□□□ -0.45
CCDC170-202ENST00000537358 CDCA7LQ96GN5 454 aa12.26□□□□□ -0.45
CCDC170-202ENST00000537358 GNL3LQ9NVN8 582 aaKnown RBP12.26□□□□□ -0.45
CCDC170-202ENST00000537358 FBXO3Q9UK99 471 aa12.26□□□□□ -0.45
CCDC170-202ENST00000537358 SSC5DA1L4H1 1573 aa12.26□□□□□ -0.45
CCDC170-202ENST00000537358 LAMB1P07942 1786 aa12.25□□□□□ -0.45
CCDC170-202ENST00000537358 CCER2I3L3R5 266 aa12.25□□□□□ -0.45
CCDC170-202ENST00000537358 USP2O75604 605 aaPredicted RBP12.25□□□□□ -0.45
CCDC170-202ENST00000537358 IFNL1Q8IU54 200 aa12.25□□□□□ -0.45
CCDC170-202ENST00000537358 WDR66Q8TBY9 1149 aa12.25□□□□□ -0.45
CCDC170-202ENST00000537358 CLMNQ96JQ2 1002 aa12.25□□□□□ -0.45
CCDC170-202ENST00000537358 MRIQ9BWK5 157 aa12.25□□□□□ -0.45
CCDC170-202ENST00000537358 CEP126Q9P2H0 1117 aa12.25□□□□□ -0.45
CCDC170-202ENST00000537358 CSADQ9Y600 493 aa12.25□□□□□ -0.45
CCDC170-202ENST00000537358 WDHD1O75717 1129 aaPredicted RBP12.24□□□□□ -0.45
CCDC170-202ENST00000537358 AK9Q5TCS8 1911 aa12.24□□□□□ -0.45
CCDC170-202ENST00000537358 FBXO46Q6PJ61 603 aaPredicted RBP12.24□□□□□ -0.45
CCDC170-202ENST00000537358 TRMT2AQ8IZ69 625 aaKnown RBP12.24□□□□□ -0.45
CCDC170-202ENST00000537358 ZDHHC15Q96MV8 337 aa12.24□□□□□ -0.45
CCDC170-202ENST00000537358 TMEM39BQ9GZU3 492 aa12.24□□□□□ -0.45
CCDC170-202ENST00000537358 OTOFQ9HC10 1997 aa12.24□□□□□ -0.45
CCDC170-202ENST00000537358 NOB1Q9ULX3 412 aaKnown RBP12.24□□□□□ -0.45
CCDC170-202ENST00000537358 HPS5Q9UPZ3 1129 aa12.24□□□□□ -0.45
CCDC170-202ENST00000537358 AOX1Q06278 1338 aa12.23□□□□□ -0.45
CCDC170-202ENST00000537358 CIAO1O76071 339 aa12.23□□□□□ -0.45
CCDC170-202ENST00000537358 FGFR2P21802 821 aa12.23□□□□□ -0.45
CCDC170-202ENST00000537358 SOX10P56693 466 aa12.23□□□□□ -0.45
CCDC170-202ENST00000537358 FKBP1CQ5VVH2 108 aa12.23□□□□□ -0.45
CCDC170-202ENST00000537358 HHIPL2Q6UWX4 724 aa12.23□□□□□ -0.45
CCDC170-202ENST00000537358 OPTNQ96CV9 577 aa12.23□□□□□ -0.45
CCDC170-202ENST00000537358 SIL1Q9H173 461 aa12.23□□□□□ -0.45
CCDC170-202ENST00000537358 ELP3Q9H9T3 547 aa12.23□□□□□ -0.45
CCDC170-202ENST00000537358 IPO8O15397 1037 aaKnown RBP12.22□□□□□ -0.45
CCDC170-202ENST00000537358 GNAI3P08754 354 aa12.22□□□□□ -0.45
CCDC170-202ENST00000537358 IL15P40933 162 aaPredicted RBP12.22□□□□□ -0.45
CCDC170-202ENST00000537358 RFX5P48382 616 aaPredicted RBP12.22□□□□□ -0.45
CCDC170-202ENST00000537358 GTF2A2P52657 109 aa12.22□□□□□ -0.45
CCDC170-202ENST00000537358 MAP3K9P80192 1104 aa12.22□□□□□ -0.45
CCDC170-202ENST00000537358 ARHGEF6Q15052 776 aa12.22□□□□□ -0.45
CCDC170-202ENST00000537358 ATP2B3Q16720 1220 aa12.22□□□□□ -0.45
CCDC170-202ENST00000537358 DCAF15Q66K64 600 aa12.22□□□□□ -0.45
CCDC170-202ENST00000537358 FAM83AQ86UY5 434 aa12.22□□□□□ -0.45
CCDC170-202ENST00000537358 ERO1AQ96HE7 468 aa12.22□□□□□ -0.45
CCDC170-202ENST00000537358 LRRFIP2Q9Y608 721 aaKnown RBP12.22□□□□□ -0.45
CCDC170-202ENST00000537358 IGF2BP3O00425 579 aaKnown RBP eCLIP12.21□□□□□ -0.45
CCDC170-202ENST00000537358 GRIK5Q16478 980 aa12.21□□□□□ -0.45
CCDC170-202ENST00000537358 ZGPATQ8N5A5 531 aaKnown RBP12.21□□□□□ -0.45
CCDC170-202ENST00000537358 ARHGAP45Q92619 1136 aa12.21□□□□□ -0.45
CCDC170-202ENST00000537358 TEPSINQ96N21 525 aa12.21□□□□□ -0.45
CCDC170-202ENST00000537358 DENND2AQ9ULE3 1009 aa12.21□□□□□ -0.45
CCDC170-202ENST00000537358 TRIM17Q9Y577 477 aa12.21□□□□□ -0.45
CCDC170-202ENST00000537358 SEMA3EO15041 775 aa12.2□□□□□ -0.46
CCDC170-202ENST00000537358 LDHBP07195 334 aaKnown RBP12.2□□□□□ -0.46
CCDC170-202ENST00000537358 RARSP54136 660 aaKnown RBP12.2□□□□□ -0.46
CCDC170-202ENST00000537358 CACNB3P54284 484 aa12.2□□□□□ -0.46
CCDC170-202ENST00000537358 VGLL4Q14135 290 aa12.2□□□□□ -0.46
CCDC170-202ENST00000537358 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms