RNA–Protein interactions for RNA: ENST00000537064.5

POLE-210, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 1 (best)

Gene POLE, Length 8,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-210	ENST00000537064	IDH1	O75874	414 aa	Known RBP	12.12	□□□□□ -0.47
POLE-210	ENST00000537064	APBA1	Q02410	837 aa		12.12	□□□□□ -0.47
POLE-210	ENST00000537064	WAPL	Q7Z5K2	1190 aa		12.12	□□□□□ -0.47
POLE-210	ENST00000537064	CCDC42	Q96M95	316 aa		12.12	□□□□□ -0.47
POLE-210	ENST00000537064		A0A1B0GVL5	298 aa		12.12	□□□□□ -0.47
POLE-210	ENST00000537064	NR1I2	O75469	434 aa		12.12	□□□□□ -0.47
POLE-210	ENST00000537064	LRMP	Q12912	555 aa		12.12	□□□□□ -0.47
POLE-210	ENST00000537064	CALML4	Q96GE6	196 aa		12.12	□□□□□ -0.47
POLE-210	ENST00000537064	CPSF1	Q10570	1443 aa	Known RBP	12.12	□□□□□ -0.47
POLE-210	ENST00000537064	TRIM75P	A6NK02	468 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	RRAGB	Q5VZM2	374 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	CEP57	Q86XR8	500 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	PLCD3	Q8N3E9	789 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	ANKRD7	Q92527	254 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	MYD88	Q99836	296 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	RUFY4	Q6ZNE9	571 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	DRC1	Q96MC2	740 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	CYP2E1	P05181	493 aa	Predicted RBP	12.11	□□□□□ -0.47
POLE-210	ENST00000537064	ZFP91	Q96JP5	570 aa	Predicted RBP	12.11	□□□□□ -0.47
POLE-210	ENST00000537064	ABCA8	O94911	1581 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	IL15	P40933	162 aa	Predicted RBP	12.11	□□□□□ -0.47
POLE-210	ENST00000537064	UBA7	P41226	1012 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	PLVAP	Q9BX97	442 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	MFSD6	Q6ZSS7	791 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	EXOC1	Q9NV70	894 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	PAG1	Q9NWQ8	432 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	GUCA1B	Q9UMX6	200 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	PHACTR2	O75167	634 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	METTL24	Q5JXM2	366 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	SLC26A6	Q9BXS9	759 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	CCDC194	A0A1B0GVG4	234 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	VGLL3	A8MV65	326 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.11	□□□□□ -0.47
POLE-210	ENST00000537064	SF3B2	Q13435	895 aa	Known RBP	12.11	□□□□□ -0.47
POLE-210	ENST00000537064	ME3	Q16798	604 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	CCDC122	Q5T0U0	273 aa		12.11	□□□□□ -0.47
POLE-210	ENST00000537064	QRICH2	Q9H0J4	1663 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	SLC8A1	P32418	973 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	KCNJ6	P48051	423 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	CLUL1	Q15846	466 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	MICU3	Q86XE3	530 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	MARCKS	P29966	332 aa	Predicted RBP	12.1	□□□□□ -0.47
POLE-210	ENST00000537064	CPLX4	Q7Z7G2	160 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	SAMD15	Q9P1V8	674 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	KCNH3	Q9ULD8	1083 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064		A0A087WUV0	522 aa	Predicted RBP	12.1	□□□□□ -0.47
POLE-210	ENST00000537064	PRC1	O43663	620 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	IFIT5	Q13325	482 aa	Known RBP	12.1	□□□□□ -0.47
POLE-210	ENST00000537064	IQUB	Q8NA54	791 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	SSH3	Q8TE77	659 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	C6orf163	Q5TEZ5	329 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	PPP2R2C	Q9Y2T4	447 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	RTL9	Q8NET4	1388 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	ATP7B	P35670	1465 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	GIGYF1	O75420	1035 aa	Predicted RBP	12.1	□□□□□ -0.47
POLE-210	ENST00000537064	UBXN1	Q04323	297 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	CHPF2	Q9P2E5	772 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	MAGEA9	P43362	315 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	RTN1	Q16799	776 aa		12.1	□□□□□ -0.47
POLE-210	ENST00000537064	STAT6	P42226	847 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	ZNF274	Q96GC6	653 aa	Predicted RBP	12.09	□□□□□ -0.47
POLE-210	ENST00000537064	WWC3	Q9ULE0	1092 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	MED14	O60244	1454 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	CTIF	O43310	598 aa	Known RBP	12.09	□□□□□ -0.47
POLE-210	ENST00000537064	KIF4A	O95239	1232 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	PNMA6A	P0CW24	399 aa	Predicted RBP	12.09	□□□□□ -0.47
POLE-210	ENST00000537064	SH3BGR	P55822	239 aa	Predicted RBP	12.09	□□□□□ -0.47
POLE-210	ENST00000537064	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.09	□□□□□ -0.47
POLE-210	ENST00000537064	SETBP1	Q9Y6X0	1596 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	SARNP	P82979	210 aa	Known RBP	12.09	□□□□□ -0.47
POLE-210	ENST00000537064	SYNRG	Q9UMZ2	1314 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	RNF113A	O15541	343 aa	Known RBP	12.09	□□□□□ -0.47
POLE-210	ENST00000537064	PPFIA4	O75335	1185 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	UQCRFS1P1	P0C7P4	283 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	CALM1	P0DP23	149 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	CALM2	P0DP24	149 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	CALM3	P0DP25	149 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	SRGAP1	Q7Z6B7	1085 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	LRRC45	Q96CN5	670 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	SEC63	Q9UGP8	760 aa	Known RBP	12.09	□□□□□ -0.47
POLE-210	ENST00000537064	AATK	Q6ZMQ8	1374 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	TTC6	Q86TZ1	520 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	GOPC	Q9HD26	462 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	CWC25	Q9NXE8	425 aa	Predicted RBP	12.09	□□□□□ -0.47
POLE-210	ENST00000537064	ZEB2	O60315	1214 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	LACTB	P83111	547 aa	Predicted RBP	12.09	□□□□□ -0.47
POLE-210	ENST00000537064	OSCAR	Q8IYS5	282 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	LRP2BP	Q9P2M1	347 aa		12.09	□□□□□ -0.47
POLE-210	ENST00000537064	GNAT2	P19087	354 aa		12.08	□□□□□ -0.47
POLE-210	ENST00000537064	CALML3	P27482	149 aa		12.08	□□□□□ -0.47
POLE-210	ENST00000537064	NLRP5	P59047	1200 aa		12.08	□□□□□ -0.47
POLE-210	ENST00000537064	PPP2R5B	Q15173	497 aa		12.08	□□□□□ -0.47
POLE-210	ENST00000537064	CACTIN	Q8WUQ7	758 aa	Known RBP	12.08	□□□□□ -0.47
POLE-210	ENST00000537064	TCEANC2	Q96MN5	208 aa		12.08	□□□□□ -0.47
POLE-210	ENST00000537064	ZRANB1	Q9UGI0	708 aa		12.08	□□□□□ -0.47
POLE-210	ENST00000537064	ZSCAN20	P17040	1043 aa	Predicted RBP	12.08	□□□□□ -0.48
POLE-210	ENST00000537064	HMGB2	P26583	209 aa	Known RBP	12.08	□□□□□ -0.48
POLE-210	ENST00000537064	APOBR	Q0VD83	1088 aa		12.08	□□□□□ -0.48
POLE-210	ENST00000537064	WTAP	Q15007	396 aa		12.08	□□□□□ -0.48
POLE-210	ENST00000537064	NEK11	Q8NG66	645 aa		12.08	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms