RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 MAGEB6Q8N7X4 407 aa15.93■□□□□ 0.14
SMG6-203ENST00000536871 LRRC2Q9BYS8 371 aa15.93■□□□□ 0.14
SMG6-203ENST00000536871 KRT23Q9C075 422 aa15.93■□□□□ 0.14
SMG6-203ENST00000536871 NAPBQ9H115 298 aa15.93■□□□□ 0.14
SMG6-203ENST00000536871 RBSNQ9H1K0 784 aa15.93■□□□□ 0.14
SMG6-203ENST00000536871 WWC3Q9ULE0 1092 aa15.93■□□□□ 0.14
SMG6-203ENST00000536871 ANGEL1Q9UNK9 670 aaKnown RBP15.93■□□□□ 0.14
SMG6-203ENST00000536871 ONECUT3O60422 494 aaPredicted RBP15.92■□□□□ 0.14
SMG6-203ENST00000536871 ADRA2BP18089 450 aa15.92■□□□□ 0.14
SMG6-203ENST00000536871 GJD4Q96KN9 370 aaPredicted RBP15.92■□□□□ 0.14
SMG6-203ENST00000536871 RNF41Q9H4P4 317 aaPredicted RBP15.92■□□□□ 0.14
SMG6-203ENST00000536871 DDX19AQ9NUU7 478 aaKnown RBP15.92■□□□□ 0.14
SMG6-203ENST00000536871 LAMA4Q16363 1823 aa15.91■□□□□ 0.14
SMG6-203ENST00000536871 DOCK2Q92608 1830 aa15.91■□□□□ 0.14
SMG6-203ENST00000536871 CPLX1O14810 134 aa15.91■□□□□ 0.14
SMG6-203ENST00000536871 HAND2P61296 217 aa15.91■□□□□ 0.14
SMG6-203ENST00000536871 NBPF5PQ86XG9 351 aaPredicted RBP15.91■□□□□ 0.14
SMG6-203ENST00000536871 LRP2BPQ9P2M1 347 aa15.91■□□□□ 0.14
SMG6-203ENST00000536871 CTDNEP1O95476 244 aa15.91■□□□□ 0.14
SMG6-203ENST00000536871 MEX3CQ5U5Q3 659 aaKnown RBP15.91■□□□□ 0.14
SMG6-203ENST00000536871 TBC1D9BQ66K14 1250 aa15.91■□□□□ 0.14
SMG6-203ENST00000536871 FERMT3Q86UX7 667 aa15.91■□□□□ 0.14
SMG6-203ENST00000536871 NAP1L2Q9ULW6 460 aaPredicted RBP15.91■□□□□ 0.14
SMG6-203ENST00000536871 KLF18A0A0U1RQI7 1052 aa15.9■□□□□ 0.14
SMG6-203ENST00000536871 GNPATO15228 680 aa15.9■□□□□ 0.14
SMG6-203ENST00000536871 LIFRP42702 1097 aa15.9■□□□□ 0.14
SMG6-203ENST00000536871 BCAMP50895 628 aa15.9■□□□□ 0.14
SMG6-203ENST00000536871 TTC6Q86TZ1 520 aa15.9■□□□□ 0.14
SMG6-203ENST00000536871 VPS37DQ86XT2 251 aa15.9■□□□□ 0.14
SMG6-203ENST00000536871 IFNL3Q8IZI9 196 aa15.9■□□□□ 0.14
SMG6-203ENST00000536871 TMTC2Q8N394 836 aa15.9■□□□□ 0.14
SMG6-203ENST00000536871 LEO1Q8WVC0 666 aaPredicted RBP15.9■□□□□ 0.14
SMG6-203ENST00000536871 DDX11Q96FC9 970 aa15.9■□□□□ 0.14
SMG6-203ENST00000536871 BCL2L12Q9HB09 334 aa15.9■□□□□ 0.14
SMG6-203ENST00000536871 COL24A1Q17RW2 1714 aa15.89■□□□□ 0.13
SMG6-203ENST00000536871 GOLGA8BA8MQT2 603 aa15.89■□□□□ 0.13
SMG6-203ENST00000536871 MBD4O95243 580 aa15.89■□□□□ 0.13
SMG6-203ENST00000536871 PCP11498 1178 aaKnown RBP15.89■□□□□ 0.13
SMG6-203ENST00000536871 RCAN1P53805 252 aa15.89■□□□□ 0.13
SMG6-203ENST00000536871 RPS8P62241 208 aaKnown RBP15.89■□□□□ 0.13
SMG6-203ENST00000536871 SART3Q15020 963 aaKnown RBP15.89■□□□□ 0.13
SMG6-203ENST00000536871 SGMS1Q86VZ5 419 aa15.89■□□□□ 0.13
SMG6-203ENST00000536871 PDLIM2Q96JY6 352 aa15.89■□□□□ 0.13
SMG6-203ENST00000536871 TRPC5Q9UL62 973 aaPredicted RBP15.89■□□□□ 0.13
SMG6-203ENST00000536871 MINPP1Q9UNW1 487 aa15.89■□□□□ 0.13
SMG6-203ENST00000536871 BTAF1O14981 1849 aa15.89■□□□□ 0.13
SMG6-203ENST00000536871 SH2B2O14492 632 aaPredicted RBP15.88■□□□□ 0.13
SMG6-203ENST00000536871 NT5C2P49902 561 aa15.88■□□□□ 0.13
SMG6-203ENST00000536871 ANTXR2P58335 489 aa15.88■□□□□ 0.13
SMG6-203ENST00000536871 CCT2P78371 535 aaKnown RBP15.88■□□□□ 0.13
SMG6-203ENST00000536871 BRAPQ7Z569 592 aa15.88■□□□□ 0.13
SMG6-203ENST00000536871 AKNAD1Q5T1N1 836 aa15.88■□□□□ 0.13
SMG6-203ENST00000536871 GIMAP6Q6P9H5 292 aa15.88■□□□□ 0.13
SMG6-203ENST00000536871 STAG1Q8WVM7 1258 aa15.88■□□□□ 0.13
SMG6-203ENST00000536871 A0A0G2JLW4 131 aa15.87■□□□□ 0.13
SMG6-203ENST00000536871 CCDC192P0DO97 292 aa15.87■□□□□ 0.13
SMG6-203ENST00000536871 TRAPPC3LQ5T215 181 aa15.87■□□□□ 0.13
SMG6-203ENST00000536871 SYNE3Q6ZMZ3 975 aa15.87■□□□□ 0.13
SMG6-203ENST00000536871 MFSD6Q6ZSS7 791 aa15.87■□□□□ 0.13
SMG6-203ENST00000536871 BCL11BQ9C0K0 894 aaPredicted RBP15.87■□□□□ 0.13
SMG6-203ENST00000536871 NUP62CLQ9H1M0 184 aa15.87■□□□□ 0.13
SMG6-203ENST00000536871 RCOR1Q9UKL0 485 aa15.87■□□□□ 0.13
SMG6-203ENST00000536871 TIAM2Q8IVF5 1701 aa15.87■□□□□ 0.13
SMG6-203ENST00000536871 GSG1L2A8MUP6 293 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 CAVIN2O95810 425 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 RFC4P35249 363 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 TDO2P48775 406 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 PPP2R5BQ15173 497 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 CHST3Q7LGC8 479 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 FBXO33Q7Z6M2 555 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 TBC1D10CQ8IV04 446 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 C8orf76Q96K31 380 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 SLC4A4Q9Y6R1 1079 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 NID2Q14112 1375 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 CYP7A1P22680 504 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 CLCN1P35523 988 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 METAP2P50579 478 aaKnown RBP eCLIP15.86■□□□□ 0.13
SMG6-203ENST00000536871 MAP3K11Q16584 847 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 BICDL1Q6ZP65 573 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 WASF1Q92558 559 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 NBPF3Q9H094 633 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 ORC3Q9UBD5 711 aaPredicted RBP15.86■□□□□ 0.13
SMG6-203ENST00000536871 ANAPC4Q9UJX5 808 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 HPS5Q9UPZ3 1129 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 LY75O60449 1722 aa15.86■□□□□ 0.13
SMG6-203ENST00000536871 MAGEB6P1A0A0J9YX57 407 aa15.85■□□□□ 0.13
SMG6-203ENST00000536871 ERICH2A1L162 156 aa15.85■□□□□ 0.13
SMG6-203ENST00000536871 ESPNB1AK53 854 aa15.85■□□□□ 0.13
SMG6-203ENST00000536871 CTAGE5O15320 804 aa15.85■□□□□ 0.13
SMG6-203ENST00000536871 FBXO18Q8NFZ0 1043 aa15.85■□□□□ 0.13
SMG6-203ENST00000536871 ARHGEF1Q92888 912 aaKnown RBP15.85■□□□□ 0.13
SMG6-203ENST00000536871 ARMT1Q9H993 441 aa15.85■□□□□ 0.13
SMG6-203ENST00000536871 NCOA5Q9HCD5 579 aaKnown RBP15.85■□□□□ 0.13
SMG6-203ENST00000536871 CCDC196A0A1B0GTZ2 297 aa15.84■□□□□ 0.13
SMG6-203ENST00000536871 SLC27A3Q5K4L6 730 aa15.84■□□□□ 0.13
SMG6-203ENST00000536871 BICD2Q8TD16 824 aa15.84■□□□□ 0.13
SMG6-203ENST00000536871 IGDCC4Q8TDY8 1250 aa15.84■□□□□ 0.13
SMG6-203ENST00000536871 BRIP1Q9BX63 1249 aa15.84■□□□□ 0.13
SMG6-203ENST00000536871 EPB41L4AQ9HCS5 686 aaPredicted RBP15.84■□□□□ 0.13
SMG6-203ENST00000536871 RAI14Q9P0K7 980 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms