RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SSC5DA1L4H1 1573 aa22.13■■□□□ 1.13
TNFRSF1A-209ENST00000536717 UBE2Q2LH0YL09 131 aa22.13■■□□□ 1.13
TNFRSF1A-209ENST00000536717 SLC10A3P09131 477 aa22.13■■□□□ 1.13
TNFRSF1A-209ENST00000536717 HSPA8P11142 646 aaKnown RBP22.13■■□□□ 1.13
TNFRSF1A-209ENST00000536717 NF2P35240 595 aa22.13■■□□□ 1.13
TNFRSF1A-209ENST00000536717 HDLBPQ00341 1268 aaKnown RBP22.13■■□□□ 1.13
TNFRSF1A-209ENST00000536717 PANK1Q8TE04 598 aa22.13■■□□□ 1.13
TNFRSF1A-209ENST00000536717 TDRD3Q9H7E2 651 aaKnown RBP22.13■■□□□ 1.13
TNFRSF1A-209ENST00000536717 SUGT1Q9Y2Z0 365 aa22.13■■□□□ 1.13
TNFRSF1A-209ENST00000536717 MYH2Q9UKX2 1941 aa22.13■■□□□ 1.13
TNFRSF1A-209ENST00000536717 A0A1B0GUL7 405 aa22.12■■□□□ 1.13
TNFRSF1A-209ENST00000536717 POLA2Q14181 598 aa22.12■■□□□ 1.13
TNFRSF1A-209ENST00000536717 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.12■■□□□ 1.13
TNFRSF1A-209ENST00000536717 WDR66Q8TBY9 1149 aa22.12■■□□□ 1.13
TNFRSF1A-209ENST00000536717 ZNF70Q9UC06 446 aaPredicted RBP22.12■■□□□ 1.13
TNFRSF1A-209ENST00000536717 PPP2R3BQ9Y5P8 575 aa22.12■■□□□ 1.13
TNFRSF1A-209ENST00000536717 CASP8AP2Q9UKL3 1982 aa22.12■■□□□ 1.13
TNFRSF1A-209ENST00000536717 LBX1P52954 281 aa22.11■■□□□ 1.13
TNFRSF1A-209ENST00000536717 ATP8B2P98198 1209 aa22.11■■□□□ 1.13
TNFRSF1A-209ENST00000536717 TTLL12Q14166 644 aaPredicted RBP22.11■■□□□ 1.13
TNFRSF1A-209ENST00000536717 CCDC102BQ68D86 513 aa22.11■■□□□ 1.13
TNFRSF1A-209ENST00000536717 RASAL3Q86YV0 1011 aa22.11■■□□□ 1.13
TNFRSF1A-209ENST00000536717 SSH3Q8TE77 659 aa22.11■■□□□ 1.13
TNFRSF1A-209ENST00000536717 BEGAINQ9BUH8 593 aa22.11■■□□□ 1.13
TNFRSF1A-209ENST00000536717 PRDM10Q9NQV6 1147 aa22.11■■□□□ 1.13
TNFRSF1A-209ENST00000536717 GNL3LQ9NVN8 582 aaKnown RBP22.11■■□□□ 1.13
TNFRSF1A-209ENST00000536717 ZBTB22O15209 634 aa22.11■■□□□ 1.13
TNFRSF1A-209ENST00000536717 IFFO2Q5TF58 517 aa22.11■■□□□ 1.13
TNFRSF1A-209ENST00000536717 TEKT1Q969V4 418 aa22.11■■□□□ 1.13
TNFRSF1A-209ENST00000536717 MRIQ9BWK5 157 aa22.11■■□□□ 1.13
TNFRSF1A-209ENST00000536717 FZD1Q9UP38 647 aa22.11■■□□□ 1.13
TNFRSF1A-209ENST00000536717 AKAP2Q9Y2D5 859 aa22.11■■□□□ 1.13
TNFRSF1A-209ENST00000536717 PRKG1Q13976 671 aa22.1■■□□□ 1.13
TNFRSF1A-209ENST00000536717 RASA3Q14644 834 aa22.1■■□□□ 1.13
TNFRSF1A-209ENST00000536717 XAGE2Q96GT9 111 aa22.1■■□□□ 1.13
TNFRSF1A-209ENST00000536717 DENND2AQ9ULE3 1009 aa22.1■■□□□ 1.13
TNFRSF1A-209ENST00000536717 OTOFQ9HC10 1997 aa22.1■■□□□ 1.13
TNFRSF1A-209ENST00000536717 MAST3O60307 1309 aa22.09■■□□□ 1.13
TNFRSF1A-209ENST00000536717 SEMA3EO15041 775 aa22.09■■□□□ 1.13
TNFRSF1A-209ENST00000536717 KIF23Q02241 960 aaPredicted RBP22.09■■□□□ 1.13
TNFRSF1A-209ENST00000536717 G3BP1Q13283 466 aaKnown RBP eCLIP22.09■■□□□ 1.13
TNFRSF1A-209ENST00000536717 ZDHHC15Q96MV8 337 aa22.09■■□□□ 1.13
TNFRSF1A-209ENST00000536717 SALL1Q9NSC2 1324 aa22.08■■□□□ 1.13
TNFRSF1A-209ENST00000536717 CENPBP07199 599 aaPredicted RBP22.08■■□□□ 1.13
TNFRSF1A-209ENST00000536717 MS4A1P11836 297 aa22.08■■□□□ 1.13
TNFRSF1A-209ENST00000536717 PRDX5P30044 214 aa22.08■■□□□ 1.13
TNFRSF1A-209ENST00000536717 TNFAIP1Q13829 316 aa22.08■■□□□ 1.13
TNFRSF1A-209ENST00000536717 NBPF12Q5TAG4 269 aaPredicted RBP22.08■■□□□ 1.13
TNFRSF1A-209ENST00000536717 ARMC9Q7Z3E5 817 aa22.08■■□□□ 1.13
TNFRSF1A-209ENST00000536717 TSKSQ9UJT2 592 aa22.08■■□□□ 1.13
TNFRSF1A-209ENST00000536717 ANGEL1Q9UNK9 670 aaKnown RBP22.08■■□□□ 1.13
TNFRSF1A-209ENST00000536717 AK9Q5TCS8 1911 aa22.07■■□□□ 1.12
TNFRSF1A-209ENST00000536717 RASGRF1Q13972 1273 aa22.07■■□□□ 1.12
TNFRSF1A-209ENST00000536717 APOBEC3HQ6NTF7 200 aaKnown RBP22.07■■□□□ 1.12
TNFRSF1A-209ENST00000536717 HHIPL2Q6UWX4 724 aa22.07■■□□□ 1.12
TNFRSF1A-209ENST00000536717 LAMB1P07942 1786 aa22.06■■□□□ 1.12
TNFRSF1A-209ENST00000536717 TCP10L2B9ZVM9 353 aa22.06■■□□□ 1.12
TNFRSF1A-209ENST00000536717 MAP3K11Q16584 847 aa22.06■■□□□ 1.12
TNFRSF1A-209ENST00000536717 LDLRAD1Q5T700 205 aa22.06■■□□□ 1.12
TNFRSF1A-209ENST00000536717 NEUROD6Q96NK8 337 aa22.06■■□□□ 1.12
TNFRSF1A-209ENST00000536717 CA12O43570 354 aa22.06■■□□□ 1.12
TNFRSF1A-209ENST00000536717 MVPQ14764 893 aaKnown RBP22.06■■□□□ 1.12
TNFRSF1A-209ENST00000536717 SUPT20HL1Q3ZLR7 823 aa22.06■■□□□ 1.12
TNFRSF1A-209ENST00000536717 CDAN1Q8IWY9 1227 aa22.06■■□□□ 1.12
TNFRSF1A-209ENST00000536717 TNS4Q8IZW8 715 aa22.06■■□□□ 1.12
TNFRSF1A-209ENST00000536717 TEPSINQ96N21 525 aa22.06■■□□□ 1.12
TNFRSF1A-209ENST00000536717 CSRNP1Q96S65 589 aa22.06■■□□□ 1.12
TNFRSF1A-209ENST00000536717 PDS5AQ29RF7 1337 aaKnown RBP22.05■■□□□ 1.12
TNFRSF1A-209ENST00000536717 CACNB3P54284 484 aa22.05■■□□□ 1.12
TNFRSF1A-209ENST00000536717 DIXDC1Q155Q3 683 aa22.05■■□□□ 1.12
TNFRSF1A-209ENST00000536717 CEP85Q6P2H3 762 aa22.05■■□□□ 1.12
TNFRSF1A-209ENST00000536717 MYO5AQ9Y4I1 1855 aaKnown RBP22.04■■□□□ 1.12
TNFRSF1A-209ENST00000536717 PPP1R12BO60237 982 aaPredicted RBP22.04■■□□□ 1.12
TNFRSF1A-209ENST00000536717 SURF6O75683 361 aaKnown RBP22.04■■□□□ 1.12
TNFRSF1A-209ENST00000536717 LDHBP07195 334 aaKnown RBP22.04■■□□□ 1.12
TNFRSF1A-209ENST00000536717 TMEM39BQ9GZU3 492 aa22.04■■□□□ 1.12
TNFRSF1A-209ENST00000536717 NOP58Q9Y2X3 529 aaKnown RBP22.04■■□□□ 1.12
TNFRSF1A-209ENST00000536717 DAGLAQ9Y4D2 1042 aa22.04■■□□□ 1.12
TNFRSF1A-209ENST00000536717 RRP1P56182 461 aaKnown RBP22.03■■□□□ 1.12
TNFRSF1A-209ENST00000536717 USP2O75604 605 aaPredicted RBP22.02■■□□□ 1.12
TNFRSF1A-209ENST00000536717 TNNI2P48788 182 aa22.02■■□□□ 1.12
TNFRSF1A-209ENST00000536717 GPR108Q9NPR9 543 aa22.02■■□□□ 1.12
TNFRSF1A-209ENST00000536717 COG6Q9Y2V7 657 aa22.02■■□□□ 1.12
TNFRSF1A-209ENST00000536717 OS9Q13438 667 aaPredicted RBP22.01■■□□□ 1.11
TNFRSF1A-209ENST00000536717 ZGPATQ8N5A5 531 aaKnown RBP22.01■■□□□ 1.11
TNFRSF1A-209ENST00000536717 ARID4AP29374 1257 aaPredicted RBP22.01■■□□□ 1.11
TNFRSF1A-209ENST00000536717 PDE3AQ14432 1141 aa22.01■■□□□ 1.11
TNFRSF1A-209ENST00000536717 TNNI3KQ59H18 835 aa22.01■■□□□ 1.11
TNFRSF1A-209ENST00000536717 FKBP1CQ5VVH2 108 aa22.01■■□□□ 1.11
TNFRSF1A-209ENST00000536717 PI16Q6UXB8 463 aa22.01■■□□□ 1.11
TNFRSF1A-209ENST00000536717 CLMNQ96JQ2 1002 aa22.01■■□□□ 1.11
TNFRSF1A-209ENST00000536717 TMOD2Q9NZR1 351 aa22.01■■□□□ 1.11
TNFRSF1A-209ENST00000536717 HMG20BQ9P0W2 317 aa22.01■■□□□ 1.11
TNFRSF1A-209ENST00000536717 DDX19BQ9UMR2 479 aa22.01■■□□□ 1.11
TNFRSF1A-209ENST00000536717 FPGT-TNNI3KV9GXZ4 949 aa22.01■■□□□ 1.11
TNFRSF1A-209ENST00000536717 MKRN3Q13064 507 aaKnown RBP22■■□□□ 1.11
TNFRSF1A-209ENST00000536717 GORABQ5T7V8 394 aa22■■□□□ 1.11
TNFRSF1A-209ENST00000536717 FAM83AQ86UY5 434 aa22■■□□□ 1.11
TNFRSF1A-209ENST00000536717 REM2Q8IYK8 340 aaPredicted RBP22■■□□□ 1.11
TNFRSF1A-209ENST00000536717 RNF186Q9NXI6 227 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms