RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 ZNF397Q8NF99 534 aaPredicted RBP9.14□□□□□ -0.95
CPSF7-216ENST00000536548 ZSWIM6Q9HCJ5 1215 aa9.14□□□□□ -0.95
CPSF7-216ENST00000536548 HYPKQ9NX55 129 aa9.14□□□□□ -0.95
CPSF7-216ENST00000536548 LRRFIP2Q9Y608 721 aaKnown RBP9.14□□□□□ -0.95
CPSF7-216ENST00000536548 MRVI1Q9Y6F6 885 aa9.14□□□□□ -0.95
CPSF7-216ENST00000536548 MORC2Q9Y6X9 1032 aaPredicted RBP9.14□□□□□ -0.95
CPSF7-216ENST00000536548 VPS37CA5D8V6 355 aaPredicted RBP9.13□□□□□ -0.95
CPSF7-216ENST00000536548 SPDYE4A6NLX3 237 aa9.13□□□□□ -0.95
CPSF7-216ENST00000536548 NPHP1O15259 732 aa9.13□□□□□ -0.95
CPSF7-216ENST00000536548 CTAGE5O15320 804 aa9.13□□□□□ -0.95
CPSF7-216ENST00000536548 SURF6O75683 361 aaKnown RBP9.13□□□□□ -0.95
CPSF7-216ENST00000536548 CASTP20810 708 aaKnown RBP9.13□□□□□ -0.95
CPSF7-216ENST00000536548 HUNKP57058 714 aa9.13□□□□□ -0.95
CPSF7-216ENST00000536548 TPD52L1Q16890 204 aaPredicted RBP9.13□□□□□ -0.95
CPSF7-216ENST00000536548 PLA2G4DQ86XP0 818 aa9.13□□□□□ -0.95
CPSF7-216ENST00000536548 CCDC83Q8IWF9 413 aa9.13□□□□□ -0.95
CPSF7-216ENST00000536548 CNBD1Q8NA66 436 aa9.13□□□□□ -0.95
CPSF7-216ENST00000536548 PI4K2BQ8TCG2 481 aa9.13□□□□□ -0.95
CPSF7-216ENST00000536548 RHPN1Q8TCX5 695 aa9.13□□□□□ -0.95
CPSF7-216ENST00000536548 JAKMIP1Q96N16 626 aaKnown RBP9.13□□□□□ -0.95
CPSF7-216ENST00000536548 TRIM5Q9C035 493 aa9.13□□□□□ -0.95
CPSF7-216ENST00000536548 ALDH8A1Q9H2A2 487 aaPredicted RBP9.13□□□□□ -0.95
CPSF7-216ENST00000536548 CLSTN2Q9H4D0 955 aa9.13□□□□□ -0.95
CPSF7-216ENST00000536548 SAGE1Q9NXZ1 904 aa9.13□□□□□ -0.95
CPSF7-216ENST00000536548 CTNNA3Q9UI47 895 aa9.13□□□□□ -0.95
CPSF7-216ENST00000536548 DDX41Q9UJV9 622 aaKnown RBP9.13□□□□□ -0.95
CPSF7-216ENST00000536548 TBC1D2BQ9UPU7 963 aa9.13□□□□□ -0.95
CPSF7-216ENST00000536548 COLQQ9Y215 455 aaPredicted RBP9.13□□□□□ -0.95
CPSF7-216ENST00000536548 TRIOBPQ9H2D6 2365 aa9.13□□□□□ -0.95
CPSF7-216ENST00000536548 AP5Z1O43299 807 aa9.12□□□□□ -0.95
CPSF7-216ENST00000536548 TUBB4AP04350 444 aa9.12□□□□□ -0.95
CPSF7-216ENST00000536548 EIF5P55010 431 aaKnown RBP9.12□□□□□ -0.95
CPSF7-216ENST00000536548 EIF6P56537 245 aaKnown RBP9.12□□□□□ -0.95
CPSF7-216ENST00000536548 SLFNL1Q499Z3 407 aa9.12□□□□□ -0.95
CPSF7-216ENST00000536548 PLEKHO1Q53GL0 409 aaPredicted RBP9.12□□□□□ -0.95
CPSF7-216ENST00000536548 LARP1BQ659C4 914 aaKnown RBP9.12□□□□□ -0.95
CPSF7-216ENST00000536548 ZSCAN25Q6NSZ9 544 aa9.12□□□□□ -0.95
CPSF7-216ENST00000536548 SARM1Q6SZW1 724 aa9.12□□□□□ -0.95
CPSF7-216ENST00000536548 RBM43Q6ZSC3 357 aaKnown RBP9.12□□□□□ -0.95
CPSF7-216ENST00000536548 CCDC186Q7Z3E2 898 aa9.12□□□□□ -0.95
CPSF7-216ENST00000536548 NUTM1Q86Y26 1132 aa9.12□□□□□ -0.95
CPSF7-216ENST00000536548 ERC1Q8IUD2 1116 aa9.12□□□□□ -0.95
CPSF7-216ENST00000536548 RTKN2Q8IZC4 609 aa9.12□□□□□ -0.95
CPSF7-216ENST00000536548 KRT222Q8N1A0 295 aa9.12□□□□□ -0.95
CPSF7-216ENST00000536548 JDP2Q8WYK2 163 aa9.12□□□□□ -0.95
CPSF7-216ENST00000536548 JARID2Q92833 1246 aaPredicted RBP9.12□□□□□ -0.95
CPSF7-216ENST00000536548 CBX8Q9HC52 389 aa9.12□□□□□ -0.95
CPSF7-216ENST00000536548 SCN7AQ01118 1682 aa9.11□□□□□ -0.95
CPSF7-216ENST00000536548 GOLGA6L19H0YKK7 550 aa9.11□□□□□ -0.95
CPSF7-216ENST00000536548 ST5P78524 1137 aa9.11□□□□□ -0.95
CPSF7-216ENST00000536548 ANO6Q4KMQ2 910 aa9.11□□□□□ -0.95
CPSF7-216ENST00000536548 CEP135Q66GS9 1140 aa9.11□□□□□ -0.95
CPSF7-216ENST00000536548 SLC51AQ86UW1 340 aa9.11□□□□□ -0.95
CPSF7-216ENST00000536548 EVI5LQ96CN4 794 aa9.11□□□□□ -0.95
CPSF7-216ENST00000536548 ERO1AQ96HE7 468 aa9.11□□□□□ -0.95
CPSF7-216ENST00000536548 MRFAP1L1Q96HT8 127 aa9.11□□□□□ -0.95
CPSF7-216ENST00000536548 SPATA32Q96LK8 384 aa9.11□□□□□ -0.95
CPSF7-216ENST00000536548 CSRNP1Q96S65 589 aa9.11□□□□□ -0.95
CPSF7-216ENST00000536548 SETDB2Q96T68 719 aa9.11□□□□□ -0.95
CPSF7-216ENST00000536548 IL1RAPL2Q9NP60 686 aa9.11□□□□□ -0.95
CPSF7-216ENST00000536548 ZNF330Q9Y3S2 320 aaPredicted RBP9.11□□□□□ -0.95
CPSF7-216ENST00000536548 POTEFA5A3E0 1075 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 FAM177BA6PVY3 158 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 NRDCO43847 1150 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 NPR1P16066 1061 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 MTHFSDQ2M296 383 aaKnown RBP9.1□□□□□ -0.95
CPSF7-216ENST00000536548 C1orf141Q5JVX7 400 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 RGMBQ6NW40 437 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 CWC27Q6UX04 472 aaKnown RBP9.1□□□□□ -0.95
CPSF7-216ENST00000536548 PPP1R42Q7Z4L9 355 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 TTC6Q86TZ1 520 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 LUZP1Q86V48 1076 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 RASEFQ8IZ41 740 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 CLASRPQ8N2M8 674 aaKnown RBP9.1□□□□□ -0.95
CPSF7-216ENST00000536548 KIF18AQ8NI77 898 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 C16orf45Q96MC5 204 aaPredicted RBP9.1□□□□□ -0.95
CPSF7-216ENST00000536548 USP44Q9H0E7 712 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 ADARB2Q9NS39 739 aaKnown RBP9.1□□□□□ -0.95
CPSF7-216ENST00000536548 KCND1Q9NSA2 647 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 ECHDC1Q9NTX5 307 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 GPRC5DQ9NZD1 345 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 CLIP2Q9UDT6 1046 aa9.1□□□□□ -0.95
CPSF7-216ENST00000536548 SPTBN5Q9NRC6 3674 aaKnown RBP9.09□□□□□ -0.95
CPSF7-216ENST00000536548 CEP290O15078 2479 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 SNED1Q8TER0 1413 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 GNAT3A8MTJ3 354 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 HOXB7P09629 217 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 KCNJ4P48050 445 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 ZNF165P49910 485 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 HIRAP54198 1017 aaPredicted RBP9.09□□□□□ -0.95
CPSF7-216ENST00000536548 GSDMDP57764 484 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 OS9Q13438 667 aaPredicted RBP9.09□□□□□ -0.95
CPSF7-216ENST00000536548 PTPN14Q15678 1187 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 STX1AQ16623 288 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 TPRNQ4KMQ1 711 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 BICD2Q8TD16 824 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 CHMP4CQ96CF2 233 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 ZSCAN16Q9H4T2 348 aaPredicted RBP9.09□□□□□ -0.95
CPSF7-216ENST00000536548 LGR6Q9HBX8 967 aa9.09□□□□□ -0.95
CPSF7-216ENST00000536548 HMG20BQ9P0W2 317 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms