RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 MYO1BO43795 1136 aa17.66■□□□□ 0.42
UBE3B-206ENST00000536398 MAP2K2P36507 400 aa17.66■□□□□ 0.42
UBE3B-206ENST00000536398 TTLL12Q14166 644 aaPredicted RBP17.66■□□□□ 0.42
UBE3B-206ENST00000536398 C20orf194Q5TEA3 1177 aa17.66■□□□□ 0.42
UBE3B-206ENST00000536398 WDR66Q8TBY9 1149 aa17.66■□□□□ 0.42
UBE3B-206ENST00000536398 GNL3LQ9NVN8 582 aaKnown RBP17.66■□□□□ 0.42
UBE3B-206ENST00000536398 AKAP2Q9Y2D5 859 aa17.66■□□□□ 0.42
UBE3B-206ENST00000536398 SURF6O75683 361 aaKnown RBP17.65■□□□□ 0.42
UBE3B-206ENST00000536398 MAP2K1Q02750 393 aaPredicted RBP17.65■□□□□ 0.42
UBE3B-206ENST00000536398 RASA3Q14644 834 aa17.65■□□□□ 0.42
UBE3B-206ENST00000536398 NBPF12Q5TAG4 269 aaPredicted RBP17.65■□□□□ 0.42
UBE3B-206ENST00000536398 CEP85Q6P2H3 762 aa17.65■□□□□ 0.42
UBE3B-206ENST00000536398 TEKT1Q969V4 418 aa17.65■□□□□ 0.42
UBE3B-206ENST00000536398 AIDAQ96BJ3 306 aa17.65■□□□□ 0.42
UBE3B-206ENST00000536398 TCP10L2B9ZVM9 353 aa17.64■□□□□ 0.41
UBE3B-206ENST00000536398 PRDX5P30044 214 aa17.64■□□□□ 0.41
UBE3B-206ENST00000536398 CACNB3P54284 484 aa17.64■□□□□ 0.41
UBE3B-206ENST00000536398 FKBP1BP68106 108 aa17.64■□□□□ 0.41
UBE3B-206ENST00000536398 HDLBPQ00341 1268 aaKnown RBP17.64■□□□□ 0.41
UBE3B-206ENST00000536398 RASGRF1Q13972 1273 aa17.64■□□□□ 0.41
UBE3B-206ENST00000536398 MVPQ14764 893 aaKnown RBP17.64■□□□□ 0.41
UBE3B-206ENST00000536398 APOBEC3HQ6NTF7 200 aaKnown RBP17.64■□□□□ 0.41
UBE3B-206ENST00000536398 CDAN1Q8IWY9 1227 aa17.64■□□□□ 0.41
UBE3B-206ENST00000536398 DENND2AQ9ULE3 1009 aa17.64■□□□□ 0.41
UBE3B-206ENST00000536398 ARAP2Q8WZ64 1704 aa17.64■□□□□ 0.41
UBE3B-206ENST00000536398 THSD7BQ9C0I4 1608 aa17.63■□□□□ 0.41
UBE3B-206ENST00000536398 SLC10A3P09131 477 aa17.63■□□□□ 0.41
UBE3B-206ENST00000536398 MS4A1P11836 297 aa17.63■□□□□ 0.41
UBE3B-206ENST00000536398 KIF23Q02241 960 aaPredicted RBP17.63■□□□□ 0.41
UBE3B-206ENST00000536398 OS9Q13438 667 aaPredicted RBP17.63■□□□□ 0.41
UBE3B-206ENST00000536398 DIXDC1Q155Q3 683 aa17.63■□□□□ 0.41
UBE3B-206ENST00000536398 RASAL3Q86YV0 1011 aa17.63■□□□□ 0.41
UBE3B-206ENST00000536398 CCDC102AQ96A19 550 aa17.63■□□□□ 0.41
UBE3B-206ENST00000536398 ZDHHC15Q96MV8 337 aa17.63■□□□□ 0.41
UBE3B-206ENST00000536398 MRIQ9BWK5 157 aa17.63■□□□□ 0.41
UBE3B-206ENST00000536398 TSKSQ9UJT2 592 aa17.63■□□□□ 0.41
UBE3B-206ENST00000536398 NOP58Q9Y2X3 529 aaKnown RBP17.63■□□□□ 0.41
UBE3B-206ENST00000536398 SUGT1Q9Y2Z0 365 aa17.63■□□□□ 0.41
UBE3B-206ENST00000536398 SSC5DA1L4H1 1573 aa17.62■□□□□ 0.41
UBE3B-206ENST00000536398 PAPPA2Q9BXP8 1791 aa17.62■□□□□ 0.41
UBE3B-206ENST00000536398 SEMA3EO15041 775 aa17.62■□□□□ 0.41
UBE3B-206ENST00000536398 HSPA8P11142 646 aaKnown RBP17.62■□□□□ 0.41
UBE3B-206ENST00000536398 NF2P35240 595 aa17.62■□□□□ 0.41
UBE3B-206ENST00000536398 CTCFP49711 727 aaPredicted RBP17.62■□□□□ 0.41
UBE3B-206ENST00000536398 LBX1P52954 281 aa17.62■□□□□ 0.41
UBE3B-206ENST00000536398 NOGQ13253 232 aa17.62■□□□□ 0.41
UBE3B-206ENST00000536398 HHIPL2Q6UWX4 724 aa17.62■□□□□ 0.41
UBE3B-206ENST00000536398 PI16Q6UXB8 463 aa17.62■□□□□ 0.41
UBE3B-206ENST00000536398 YTHDC1Q96MU7 727 aaKnown RBP17.62■□□□□ 0.41
UBE3B-206ENST00000536398 ANGEL1Q9UNK9 670 aaKnown RBP17.62■□□□□ 0.41
UBE3B-206ENST00000536398 LDHBP07195 334 aaKnown RBP17.61■□□□□ 0.41
UBE3B-206ENST00000536398 TNNI3KQ59H18 835 aa17.61■□□□□ 0.41
UBE3B-206ENST00000536398 ARMC9Q7Z3E5 817 aa17.61■□□□□ 0.41
UBE3B-206ENST00000536398 TEPSINQ96N21 525 aa17.61■□□□□ 0.41
UBE3B-206ENST00000536398 DBNDD2Q9BQY9 259 aa17.61■□□□□ 0.41
UBE3B-206ENST00000536398 TMEM39BQ9GZU3 492 aa17.61■□□□□ 0.41
UBE3B-206ENST00000536398 ZBTB40Q9NUA8 1239 aa17.61■□□□□ 0.41
UBE3B-206ENST00000536398 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.61■□□□□ 0.41
UBE3B-206ENST00000536398 PPP2R3BQ9Y5P8 575 aa17.61■□□□□ 0.41
UBE3B-206ENST00000536398 FPGT-TNNI3KV9GXZ4 949 aa17.61■□□□□ 0.41
UBE3B-206ENST00000536398 SALL1Q9NSC2 1324 aa17.61■□□□□ 0.41
UBE3B-206ENST00000536398 ZBTB22O15209 634 aa17.6■□□□□ 0.41
UBE3B-206ENST00000536398 MKRN3Q13064 507 aaKnown RBP17.6■□□□□ 0.41
UBE3B-206ENST00000536398 GORABQ5T7V8 394 aa17.6■□□□□ 0.41
UBE3B-206ENST00000536398 SIRT2Q8IXJ6 389 aa17.6■□□□□ 0.41
UBE3B-206ENST00000536398 HMG20BQ9P0W2 317 aa17.6■□□□□ 0.41
UBE3B-206ENST00000536398 ABCF2Q9UG63 623 aa17.6■□□□□ 0.41
UBE3B-206ENST00000536398 DDX19BQ9UMR2 479 aa17.6■□□□□ 0.41
UBE3B-206ENST00000536398 DAGLAQ9Y4D2 1042 aa17.6■□□□□ 0.41
UBE3B-206ENST00000536398 MAST3O60307 1309 aa17.6■□□□□ 0.41
UBE3B-206ENST00000536398 ECM29Q5VYK3 1845 aa17.59■□□□□ 0.41
UBE3B-206ENST00000536398 SUPT20HL1Q3ZLR7 823 aa17.59■□□□□ 0.41
UBE3B-206ENST00000536398 LDLRAD1Q5T700 205 aa17.59■□□□□ 0.41
UBE3B-206ENST00000536398 TBC1D9Q6ZT07 1266 aa17.59■□□□□ 0.41
UBE3B-206ENST00000536398 CSRNP1Q96S65 589 aa17.59■□□□□ 0.41
UBE3B-206ENST00000536398 EXOC6BQ9Y2D4 811 aa17.59■□□□□ 0.41
UBE3B-206ENST00000536398 USP2O75604 605 aaPredicted RBP17.58■□□□□ 0.4
UBE3B-206ENST00000536398 TNFAIP1Q13829 316 aa17.58■□□□□ 0.4
UBE3B-206ENST00000536398 CDC42EP5Q6NZY7 148 aa17.58■□□□□ 0.4
UBE3B-206ENST00000536398 SPATA5Q8NB90 893 aa17.58■□□□□ 0.4
UBE3B-206ENST00000536398 CLMNQ96JQ2 1002 aa17.58■□□□□ 0.4
UBE3B-206ENST00000536398 BEGAINQ9BUH8 593 aa17.58■□□□□ 0.4
UBE3B-206ENST00000536398 CCDC8Q9H0W5 538 aaPredicted RBP17.58■□□□□ 0.4
UBE3B-206ENST00000536398 GPR108Q9NPR9 543 aa17.58■□□□□ 0.4
UBE3B-206ENST00000536398 TLR7Q9NYK1 1049 aaKnown RBP17.58■□□□□ 0.4
UBE3B-206ENST00000536398 MYH13Q9UKX3 1938 aa17.58■□□□□ 0.4
UBE3B-206ENST00000536398 PDS5AQ29RF7 1337 aaKnown RBP17.57■□□□□ 0.4
UBE3B-206ENST00000536398 ARID4AP29374 1257 aaPredicted RBP17.57■□□□□ 0.4
UBE3B-206ENST00000536398 MCAMP43121 646 aa17.57■□□□□ 0.4
UBE3B-206ENST00000536398 MAP3K11Q16584 847 aa17.57■□□□□ 0.4
UBE3B-206ENST00000536398 ZNF384Q8TF68 577 aa17.57■□□□□ 0.4
UBE3B-206ENST00000536398 EAF2Q96CJ1 260 aaPredicted RBP17.57■□□□□ 0.4
UBE3B-206ENST00000536398 SNRKQ9NRH2 765 aa17.57■□□□□ 0.4
UBE3B-206ENST00000536398 PPP1R12BO60237 982 aaPredicted RBP17.56■□□□□ 0.4
UBE3B-206ENST00000536398 PDE3AQ14432 1141 aa17.56■□□□□ 0.4
UBE3B-206ENST00000536398 PRDM10Q9NQV6 1147 aa17.56■□□□□ 0.4
UBE3B-206ENST00000536398 USP40Q9NVE5 1235 aa17.56■□□□□ 0.4
UBE3B-206ENST00000536398 DBNLQ9UJU6 430 aaKnown RBP17.56■□□□□ 0.4
UBE3B-206ENST00000536398 TNNI2P48788 182 aa17.55■□□□□ 0.4
UBE3B-206ENST00000536398 MECOMQ03112 1051 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms