RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 GNAI3P08754 354 aa17.8■□□□□ 0.44
RTN3P1-201ENST00000536295 RASA3Q14644 834 aa17.8■□□□□ 0.44
RTN3P1-201ENST00000536295 ATP2B3Q16720 1220 aa17.8■□□□□ 0.44
RTN3P1-201ENST00000536295 SPDYE2Q495Y8 402 aa17.8■□□□□ 0.44
RTN3P1-201ENST00000536295 NBPF12Q5TAG4 269 aaPredicted RBP17.8■□□□□ 0.44
RTN3P1-201ENST00000536295 ABHD8Q96I13 439 aa17.8■□□□□ 0.44
RTN3P1-201ENST00000536295 SSC5DA1L4H1 1573 aa17.79■□□□□ 0.44
RTN3P1-201ENST00000536295 SUPT20HL1Q3ZLR7 823 aa17.79■□□□□ 0.44
RTN3P1-201ENST00000536295 ATF7IPQ6VMQ6 1270 aa17.79■□□□□ 0.44
RTN3P1-201ENST00000536295 REM2Q8IYK8 340 aaPredicted RBP17.79■□□□□ 0.44
RTN3P1-201ENST00000536295 FBXO3Q9UK99 471 aa17.79■□□□□ 0.44
RTN3P1-201ENST00000536295 TCP10L2B9ZVM9 353 aa17.78■□□□□ 0.44
RTN3P1-201ENST00000536295 PPP1R12BO60237 982 aaPredicted RBP17.78■□□□□ 0.44
RTN3P1-201ENST00000536295 IL15P40933 162 aaPredicted RBP17.78■□□□□ 0.44
RTN3P1-201ENST00000536295 TNFAIP1Q13829 316 aa17.78■□□□□ 0.44
RTN3P1-201ENST00000536295 LDLRAD1Q5T700 205 aa17.78■□□□□ 0.44
RTN3P1-201ENST00000536295 TEKT1Q969V4 418 aa17.78■□□□□ 0.44
RTN3P1-201ENST00000536295 CASP8AP2Q9UKL3 1982 aa17.78■□□□□ 0.44
RTN3P1-201ENST00000536295 SRGAP3O43295 1099 aa17.77■□□□□ 0.44
RTN3P1-201ENST00000536295 COPRSQ9NQ92 184 aa17.77■□□□□ 0.44
RTN3P1-201ENST00000536295 AKAP11Q9UKA4 1901 aa17.76■□□□□ 0.43
RTN3P1-201ENST00000536295 CACNB3P54284 484 aa17.76■□□□□ 0.43
RTN3P1-201ENST00000536295 DGKZQ13574 1117 aa17.76■□□□□ 0.43
RTN3P1-201ENST00000536295 SLC10A4Q96EP9 437 aa17.76■□□□□ 0.43
RTN3P1-201ENST00000536295 CLMNQ96JQ2 1002 aa17.76■□□□□ 0.43
RTN3P1-201ENST00000536295 MCOLN1Q9GZU1 580 aa17.76■□□□□ 0.43
RTN3P1-201ENST00000536295 IREB2P48200 963 aaKnown RBP17.75■□□□□ 0.43
RTN3P1-201ENST00000536295 TNNI2P48788 182 aa17.75■□□□□ 0.43
RTN3P1-201ENST00000536295 HDLBPQ00341 1268 aaKnown RBP17.75■□□□□ 0.43
RTN3P1-201ENST00000536295 MAP3K11Q16584 847 aa17.75■□□□□ 0.43
RTN3P1-201ENST00000536295 SPRYD7Q5W111 196 aa17.75■□□□□ 0.43
RTN3P1-201ENST00000536295 ZKSCAN2Q63HK3 967 aa17.75■□□□□ 0.43
RTN3P1-201ENST00000536295 CDAN1Q8IWY9 1227 aa17.75■□□□□ 0.43
RTN3P1-201ENST00000536295 WDR66Q8TBY9 1149 aa17.75■□□□□ 0.43
RTN3P1-201ENST00000536295 TMEM39BQ9GZU3 492 aa17.75■□□□□ 0.43
RTN3P1-201ENST00000536295 GNL3LQ9NVN8 582 aaKnown RBP17.75■□□□□ 0.43
RTN3P1-201ENST00000536295 MAST3O60307 1309 aa17.74■□□□□ 0.43
RTN3P1-201ENST00000536295 USP2O75604 605 aaPredicted RBP17.74■□□□□ 0.43
RTN3P1-201ENST00000536295 TBC1D8O95759 1140 aa17.74■□□□□ 0.43
RTN3P1-201ENST00000536295 GNAI2P04899 355 aa17.74■□□□□ 0.43
RTN3P1-201ENST00000536295 ADORA1P30542 326 aa17.74■□□□□ 0.43
RTN3P1-201ENST00000536295 PHKA1P46020 1223 aa17.74■□□□□ 0.43
RTN3P1-201ENST00000536295 SREBF2Q12772 1141 aa17.74■□□□□ 0.43
RTN3P1-201ENST00000536295 TMEM57Q8N5G2 664 aa17.74■□□□□ 0.43
RTN3P1-201ENST00000536295 ZDHHC15Q96MV8 337 aa17.74■□□□□ 0.43
RTN3P1-201ENST00000536295 SUGT1Q9Y2Z0 365 aa17.74■□□□□ 0.43
RTN3P1-201ENST00000536295 CCDC85CA6NKD9 419 aa17.73■□□□□ 0.43
RTN3P1-201ENST00000536295 TM4SF4P48230 202 aa17.73■□□□□ 0.43
RTN3P1-201ENST00000536295 TIMM10P62072 90 aa17.73■□□□□ 0.43
RTN3P1-201ENST00000536295 TFCP2Q12800 502 aa17.73■□□□□ 0.43
RTN3P1-201ENST00000536295 MTX1Q13505 466 aa17.73■□□□□ 0.43
RTN3P1-201ENST00000536295 TEPSINQ96N21 525 aa17.73■□□□□ 0.43
RTN3P1-201ENST00000536295 TMOD2Q9NZR1 351 aa17.73■□□□□ 0.43
RTN3P1-201ENST00000536295 MYH13Q9UKX3 1938 aa17.72■□□□□ 0.43
RTN3P1-201ENST00000536295 PRDX5P30044 214 aa17.72■□□□□ 0.43
RTN3P1-201ENST00000536295 APOBEC3HQ6NTF7 200 aaKnown RBP17.72■□□□□ 0.43
RTN3P1-201ENST00000536295 WNK4Q96J92 1243 aa17.72■□□□□ 0.43
RTN3P1-201ENST00000536295 MRIQ9BWK5 157 aa17.72■□□□□ 0.43
RTN3P1-201ENST00000536295 PNMA6EA0A0J9YXQ4 647 aa17.71■□□□□ 0.43
RTN3P1-201ENST00000536295 DIXDC1Q155Q3 683 aa17.71■□□□□ 0.43
RTN3P1-201ENST00000536295 CCDC102BQ68D86 513 aa17.71■□□□□ 0.43
RTN3P1-201ENST00000536295 HHIPL2Q6UWX4 724 aa17.71■□□□□ 0.43
RTN3P1-201ENST00000536295 ANKRD13AQ8IZ07 590 aa17.71■□□□□ 0.43
RTN3P1-201ENST00000536295 DENND2AQ9ULE3 1009 aa17.71■□□□□ 0.43
RTN3P1-201ENST00000536295 A0A1B0GUL7 405 aa17.7■□□□□ 0.42
RTN3P1-201ENST00000536295 LDHBP07195 334 aaKnown RBP17.7■□□□□ 0.42
RTN3P1-201ENST00000536295 ZBTB48P10074 688 aaPredicted RBP17.7■□□□□ 0.42
RTN3P1-201ENST00000536295 FTSJ3Q8IY81 847 aaKnown RBP17.7■□□□□ 0.42
RTN3P1-201ENST00000536295 ELP3Q9H9T3 547 aa17.7■□□□□ 0.42
RTN3P1-201ENST00000536295 AKAP2Q9Y2D5 859 aa17.7■□□□□ 0.42
RTN3P1-201ENST00000536295 ZBED9Q6R2W3 1325 aa17.7■□□□□ 0.42
RTN3P1-201ENST00000536295 MANSC4A6NHS7 340 aaPredicted RBP17.69■□□□□ 0.42
RTN3P1-201ENST00000536295 UNCXA6NJT0 531 aa17.69■□□□□ 0.42
RTN3P1-201ENST00000536295 SEMA3EO15041 775 aa17.69■□□□□ 0.42
RTN3P1-201ENST00000536295 XAGE2Q96GT9 111 aa17.69■□□□□ 0.42
RTN3P1-201ENST00000536295 NEUROD6Q96NK8 337 aa17.69■□□□□ 0.42
RTN3P1-201ENST00000536295 DAGLAQ9Y4D2 1042 aa17.69■□□□□ 0.42
RTN3P1-201ENST00000536295 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.69■□□□□ 0.42
RTN3P1-201ENST00000536295 GJA5P36382 358 aa17.68■□□□□ 0.42
RTN3P1-201ENST00000536295 G3BP1Q13283 466 aaKnown RBP eCLIP17.68■□□□□ 0.42
RTN3P1-201ENST00000536295 RASGRF1Q13972 1273 aa17.68■□□□□ 0.42
RTN3P1-201ENST00000536295 ITPRIPQ8IWB1 547 aa17.68■□□□□ 0.42
RTN3P1-201ENST00000536295 ZNF296Q8WUU4 475 aaPredicted RBP17.68■□□□□ 0.42
RTN3P1-201ENST00000536295 C1orf115Q9H7X2 142 aa17.68■□□□□ 0.42
RTN3P1-201ENST00000536295 SALL1Q9NSC2 1324 aa17.68■□□□□ 0.42
RTN3P1-201ENST00000536295 MVPQ14764 893 aaKnown RBP17.67■□□□□ 0.42
RTN3P1-201ENST00000536295 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.67■□□□□ 0.42
RTN3P1-201ENST00000536295 FAM83AQ86UY5 434 aa17.67■□□□□ 0.42
RTN3P1-201ENST00000536295 IFNL1Q8IU54 200 aa17.67■□□□□ 0.42
RTN3P1-201ENST00000536295 OPTNQ96CV9 577 aa17.67■□□□□ 0.42
RTN3P1-201ENST00000536295 R3HDMLQ9H3Y0 253 aa17.67■□□□□ 0.42
RTN3P1-201ENST00000536295 ABCF2Q9UG63 623 aa17.67■□□□□ 0.42
RTN3P1-201ENST00000536295 OTOFQ9HC10 1997 aa17.67■□□□□ 0.42
RTN3P1-201ENST00000536295 GPR25O00155 361 aa17.66■□□□□ 0.42
RTN3P1-201ENST00000536295 RLBP1P12271 317 aa17.66■□□□□ 0.42
RTN3P1-201ENST00000536295 INHBEP58166 350 aa17.66■□□□□ 0.42
RTN3P1-201ENST00000536295 MAP3K9P80192 1104 aa17.66■□□□□ 0.42
RTN3P1-201ENST00000536295 TCP10Q12799 353 aa17.66■□□□□ 0.42
RTN3P1-201ENST00000536295 VGLL4Q14135 290 aa17.66■□□□□ 0.42
RTN3P1-201ENST00000536295 GORABQ5T7V8 394 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms