RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 VPS37DQ86XT2 251 aa10.19□□□□□ -0.78
CHFR-211ENST00000535897 CDAN1Q8IWY9 1227 aa10.19□□□□□ -0.78
CHFR-211ENST00000535897 CNKSR2Q8WXI2 1034 aa10.19□□□□□ -0.78
CHFR-211ENST00000535897 BRI3BPQ8WY22 251 aa10.19□□□□□ -0.78
CHFR-211ENST00000535897 C9orf78Q9NZ63 289 aaPredicted RBP10.19□□□□□ -0.78
CHFR-211ENST00000535897 SERPINA10Q9UK55 444 aa10.19□□□□□ -0.78
CHFR-211ENST00000535897 PTCH2Q9Y6C5 1203 aa10.19□□□□□ -0.78
CHFR-211ENST00000535897 ARAP2Q8WZ64 1704 aa10.19□□□□□ -0.78
CHFR-211ENST00000535897 IL16Q14005 1332 aa10.18□□□□□ -0.78
CHFR-211ENST00000535897 FAM205AQ6ZU69 1335 aa10.18□□□□□ -0.78
CHFR-211ENST00000535897 GRM8O00222 908 aa10.18□□□□□ -0.78
CHFR-211ENST00000535897 FRAT2O75474 233 aaPredicted RBP10.18□□□□□ -0.78
CHFR-211ENST00000535897 HIBADHP31937 336 aaKnown RBP10.18□□□□□ -0.78
CHFR-211ENST00000535897 KIF22Q14807 665 aa10.18□□□□□ -0.78
CHFR-211ENST00000535897 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.18□□□□□ -0.78
CHFR-211ENST00000535897 DZIP1LQ8IYY4 767 aaKnown RBP10.18□□□□□ -0.78
CHFR-211ENST00000535897 ZNF333Q96JL9 665 aa10.18□□□□□ -0.78
CHFR-211ENST00000535897 MS4A4AQ96JQ5 239 aa10.18□□□□□ -0.78
CHFR-211ENST00000535897 TMEM39BQ9GZU3 492 aa10.18□□□□□ -0.78
CHFR-211ENST00000535897 SALL2Q9Y467 1007 aaPredicted RBP10.18□□□□□ -0.78
CHFR-211ENST00000535897 ECM2O94769 699 aaPredicted RBP10.17□□□□□ -0.78
CHFR-211ENST00000535897 CRKP46108 304 aa10.17□□□□□ -0.78
CHFR-211ENST00000535897 MAP3K9P80192 1104 aa10.17□□□□□ -0.78
CHFR-211ENST00000535897 CAP1Q01518 475 aa10.17□□□□□ -0.78
CHFR-211ENST00000535897 CHAF1AQ13111 956 aaPredicted RBP10.17□□□□□ -0.78
CHFR-211ENST00000535897 EPHA10Q5JZY3 1008 aa10.17□□□□□ -0.78
CHFR-211ENST00000535897 BEND3Q5T5X7 828 aa10.17□□□□□ -0.78
CHFR-211ENST00000535897 SLC4A10Q6U841 1118 aa10.17□□□□□ -0.78
CHFR-211ENST00000535897 FAM43AQ8N2R8 423 aa10.17□□□□□ -0.78
CHFR-211ENST00000535897 TEPSINQ96N21 525 aa10.17□□□□□ -0.78
CHFR-211ENST00000535897 IQSEC3Q9UPP2 1182 aaPredicted RBP10.17□□□□□ -0.78
CHFR-211ENST00000535897 CETPP11597 493 aa10.16□□□□□ -0.78
CHFR-211ENST00000535897 FXR1P51114 621 aaKnown RBP eCLIP10.16□□□□□ -0.78
CHFR-211ENST00000535897 CACNB3P54284 484 aa10.16□□□□□ -0.78
CHFR-211ENST00000535897 EXOSC9Q06265 439 aaKnown RBP10.16□□□□□ -0.78
CHFR-211ENST00000535897 UBE4AQ14139 1066 aa10.16□□□□□ -0.78
CHFR-211ENST00000535897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.16□□□□□ -0.78
CHFR-211ENST00000535897 TDRD7Q8NHU6 1098 aaKnown RBP10.16□□□□□ -0.78
CHFR-211ENST00000535897 SH3TC2Q8TF17 1288 aa10.16□□□□□ -0.78
CHFR-211ENST00000535897 FAM84BQ96KN1 310 aaPredicted RBP10.16□□□□□ -0.78
CHFR-211ENST00000535897 WRNIP1Q96S55 665 aa10.16□□□□□ -0.78
CHFR-211ENST00000535897 TMOD2Q9NZR1 351 aa10.16□□□□□ -0.78
CHFR-211ENST00000535897 COLQQ9Y215 455 aaPredicted RBP10.16□□□□□ -0.78
CHFR-211ENST00000535897 TRIOBPQ9H2D6 2365 aa10.16□□□□□ -0.78
CHFR-211ENST00000535897 ZSWIM8A7E2V4 1837 aa10.15□□□□□ -0.78
CHFR-211ENST00000535897 SPDYE5A6NIY4 337 aa10.15□□□□□ -0.78
CHFR-211ENST00000535897 VAMP4O75379 141 aa10.15□□□□□ -0.78
CHFR-211ENST00000535897 CCDC184Q52MB2 194 aa10.15□□□□□ -0.78
CHFR-211ENST00000535897 CAVIN4Q5BKX8 364 aa10.15□□□□□ -0.78
CHFR-211ENST00000535897 ZKSCAN4Q969J2 545 aaPredicted RBP10.15□□□□□ -0.78
CHFR-211ENST00000535897 TEKT1Q969V4 418 aa10.15□□□□□ -0.78
CHFR-211ENST00000535897 HOOK2Q96ED9 719 aa10.15□□□□□ -0.78
CHFR-211ENST00000535897 PUS3Q9BZE2 481 aaKnown RBP10.15□□□□□ -0.78
CHFR-211ENST00000535897 MROH5Q6ZUA9 1318 aa10.14□□□□□ -0.79
CHFR-211ENST00000535897 H0YGN5 161 aa10.14□□□□□ -0.79
CHFR-211ENST00000535897 TLR2O60603 784 aa10.14□□□□□ -0.79
CHFR-211ENST00000535897 LACTBP83111 547 aaPredicted RBP10.14□□□□□ -0.79
CHFR-211ENST00000535897 SNAPC2Q13487 334 aa10.14□□□□□ -0.79
CHFR-211ENST00000535897 GRIK5Q16478 980 aa10.14□□□□□ -0.79
CHFR-211ENST00000535897 ERO1BQ86YB8 467 aa10.14□□□□□ -0.79
CHFR-211ENST00000535897 TBC1D22AQ8WUA7 517 aa10.14□□□□□ -0.79
CHFR-211ENST00000535897 ARHGAP39Q9C0H5 1083 aa10.14□□□□□ -0.79
CHFR-211ENST00000535897 SRCIN1Q9C0H9 1055 aa10.14□□□□□ -0.79
CHFR-211ENST00000535897 SNCAIPQ9Y6H5 919 aa10.14□□□□□ -0.79
CHFR-211ENST00000535897 BTBD19C9JJ37 291 aa10.13□□□□□ -0.79
CHFR-211ENST00000535897 IRF6O14896 467 aa10.13□□□□□ -0.79
CHFR-211ENST00000535897 ALDH1L1O75891 902 aa10.13□□□□□ -0.79
CHFR-211ENST00000535897 GNRH1P01148 92 aa10.13□□□□□ -0.79
CHFR-211ENST00000535897 METTL24Q5JXM2 366 aa10.13□□□□□ -0.79
CHFR-211ENST00000535897 DCAF15Q66K64 600 aa10.13□□□□□ -0.79
CHFR-211ENST00000535897 MAST3O60307 1309 aa10.12□□□□□ -0.79
CHFR-211ENST00000535897 PRMT2P55345 433 aa10.12□□□□□ -0.79
CHFR-211ENST00000535897 HDLBPQ00341 1268 aaKnown RBP10.12□□□□□ -0.79
CHFR-211ENST00000535897 PPIL2Q13356 520 aa10.12□□□□□ -0.79
CHFR-211ENST00000535897 CHRDL2Q6WN34 429 aa10.12□□□□□ -0.79
CHFR-211ENST00000535897 MIGA2Q7L4E1 593 aa10.12□□□□□ -0.79
CHFR-211ENST00000535897 WDR63Q8IWG1 891 aa10.12□□□□□ -0.79
CHFR-211ENST00000535897 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.12□□□□□ -0.79
CHFR-211ENST00000535897 RAET1EQ8TD07 263 aa10.12□□□□□ -0.79
CHFR-211ENST00000535897 DPF3Q92784 378 aa10.12□□□□□ -0.79
CHFR-211ENST00000535897 SUCLG2Q96I99 432 aa10.12□□□□□ -0.79
CHFR-211ENST00000535897 MRS2Q9HD23 443 aa10.12□□□□□ -0.79
CHFR-211ENST00000535897 ZCCHC17Q9NP64 241 aaKnown RBP10.12□□□□□ -0.79
CHFR-211ENST00000535897 BIN2Q9UBW5 565 aaPredicted RBP10.12□□□□□ -0.79
CHFR-211ENST00000535897 CPA4Q9UI42 421 aa10.12□□□□□ -0.79
CHFR-211ENST00000535897 FMNL1O95466 1100 aaPredicted RBP10.11□□□□□ -0.79
CHFR-211ENST00000535897 NBPF7P0C2Y1 421 aaPredicted RBP10.11□□□□□ -0.79
CHFR-211ENST00000535897 ZEB1P37275 1124 aaPredicted RBP10.11□□□□□ -0.79
CHFR-211ENST00000535897 FBXO33Q7Z6M2 555 aa10.11□□□□□ -0.79
CHFR-211ENST00000535897 FAM83AQ86UY5 434 aa10.11□□□□□ -0.79
CHFR-211ENST00000535897 ZDHHC15Q96MV8 337 aa10.11□□□□□ -0.79
CHFR-211ENST00000535897 ZNF341Q9BYN7 854 aa10.11□□□□□ -0.79
CHFR-211ENST00000535897 BICC1Q9H694 974 aaKnown RBP10.11□□□□□ -0.79
CHFR-211ENST00000535897 RIPOR2Q9Y4F9 1068 aa10.11□□□□□ -0.79
CHFR-211ENST00000535897 AK9Q5TCS8 1911 aa10.11□□□□□ -0.79
CHFR-211ENST00000535897 MYH13Q9UKX3 1938 aa10.11□□□□□ -0.79
CHFR-211ENST00000535897 PDHXO00330 501 aa10.1□□□□□ -0.79
CHFR-211ENST00000535897 PDE8BO95263 885 aa10.1□□□□□ -0.79
CHFR-211ENST00000535897 HOXD10P28358 340 aa10.1□□□□□ -0.79
CHFR-211ENST00000535897 INPP5BP32019 993 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms