RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 KCNG4Q8TDN1 519 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 RAPGEF4Q8WZA2 1011 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 ZBTB3Q9H5J0 574 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 SENP2Q9HC62 589 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 HELLSQ9NRZ9 838 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 GTF2E1P29083 439 aaPredicted RBP15.5■□□□□ 0.07
HDAC4-214ENST00000535493 CDC27P30260 824 aa15.5■□□□□ 0.07
HDAC4-214ENST00000535493 FOXO4P98177 505 aa15.5■□□□□ 0.07
HDAC4-214ENST00000535493 PUS7LQ9H0K6 701 aaKnown RBP15.5■□□□□ 0.07
HDAC4-214ENST00000535493 INCENPQ9NQS7 918 aa15.5■□□□□ 0.07
HDAC4-214ENST00000535493 A0A1W2PQ27 194 aa15.5■□□□□ 0.07
HDAC4-214ENST00000535493 A0A1W2PQ64 194 aa15.5■□□□□ 0.07
HDAC4-214ENST00000535493 A0A1W2PQD8 194 aa15.5■□□□□ 0.07
HDAC4-214ENST00000535493 SYKP43405 635 aa15.5■□□□□ 0.07
HDAC4-214ENST00000535493 ADKP55263 362 aaKnown RBP15.5■□□□□ 0.07
HDAC4-214ENST00000535493 ST5P78524 1137 aa15.5■□□□□ 0.07
HDAC4-214ENST00000535493 WDR24Q96S15 920 aa15.5■□□□□ 0.07
HDAC4-214ENST00000535493 MYL10Q9BUA6 226 aa15.5■□□□□ 0.07
HDAC4-214ENST00000535493 PSDA5PKW4 1024 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-214ENST00000535493 HNRNPH2P55795 449 aaKnown RBP15.49■□□□□ 0.07
HDAC4-214ENST00000535493 ANTXR2P58335 489 aa15.49■□□□□ 0.07
HDAC4-214ENST00000535493 FOXP4Q8IVH2 680 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-214ENST00000535493 DDX17Q92841 729 aaKnown RBP15.49■□□□□ 0.07
HDAC4-214ENST00000535493 DESI2Q9BSY9 194 aa15.49■□□□□ 0.07
HDAC4-214ENST00000535493 IRX2Q9BZI1 471 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-214ENST00000535493 NFAT5O94916 1531 aa15.49■□□□□ 0.07
HDAC4-214ENST00000535493 KIF2AO00139 706 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-214ENST00000535493 SASH3O75995 380 aa15.49■□□□□ 0.07
HDAC4-214ENST00000535493 CASP7P55210 303 aa15.49■□□□□ 0.07
HDAC4-214ENST00000535493 KIF23Q02241 960 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-214ENST00000535493 PDE4BQ07343 736 aa15.49■□□□□ 0.07
HDAC4-214ENST00000535493 ZNF827Q17R98 1081 aa15.49■□□□□ 0.07
HDAC4-214ENST00000535493 TMCO3Q6UWJ1 677 aa15.49■□□□□ 0.07
HDAC4-214ENST00000535493 ZFP91Q96JP5 570 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-214ENST00000535493 POLR3EQ9NVU0 708 aa15.49■□□□□ 0.07
HDAC4-214ENST00000535493 SLIT1O75093 1534 aa15.49■□□□□ 0.07
HDAC4-214ENST00000535493 TPM4P67936 248 aa15.48■□□□□ 0.07
HDAC4-214ENST00000535493 SHC4Q6S5L8 630 aa15.48■□□□□ 0.07
HDAC4-214ENST00000535493 REXO1L1PQ8IX06 675 aa15.48■□□□□ 0.07
HDAC4-214ENST00000535493 LAMA4Q16363 1823 aa15.48■□□□□ 0.07
HDAC4-214ENST00000535493 SNRPA1P09661 255 aaKnown RBP15.48■□□□□ 0.07
HDAC4-214ENST00000535493 EVCP57679 992 aa15.48■□□□□ 0.07
HDAC4-214ENST00000535493 LONRF3Q496Y0 759 aa15.48■□□□□ 0.07
HDAC4-214ENST00000535493 TEX35Q5T0J7 233 aa15.48■□□□□ 0.07
HDAC4-214ENST00000535493 ATL3Q6DD88 541 aa15.48■□□□□ 0.07
HDAC4-214ENST00000535493 TRMT44Q8IYL2 757 aaKnown RBP15.47■□□□□ 0.07
HDAC4-214ENST00000535493 CCDC82Q8N4S0 544 aa15.47■□□□□ 0.07
HDAC4-214ENST00000535493 TIGD1Q96MW7 591 aa15.47■□□□□ 0.07
HDAC4-214ENST00000535493 PARP3Q9Y6F1 533 aa15.47■□□□□ 0.07
HDAC4-214ENST00000535493 CCDC66A2RUB6 948 aa15.47■□□□□ 0.07
HDAC4-214ENST00000535493 NRDCO43847 1150 aa15.47■□□□□ 0.07
HDAC4-214ENST00000535493 TOP1P11387 765 aaKnown RBP15.47■□□□□ 0.07
HDAC4-214ENST00000535493 GNG11P61952 73 aa15.47■□□□□ 0.07
HDAC4-214ENST00000535493 KARSQ15046 597 aaKnown RBP15.47■□□□□ 0.07
HDAC4-214ENST00000535493 TOGARAM2Q6ZUX3 1019 aa15.47■□□□□ 0.07
HDAC4-214ENST00000535493 MICU3Q86XE3 530 aa15.47■□□□□ 0.07
HDAC4-214ENST00000535493 VPS37DQ86XT2 251 aa15.47■□□□□ 0.07
HDAC4-214ENST00000535493 CABLES1Q8TDN4 633 aa15.47■□□□□ 0.07
HDAC4-214ENST00000535493 KCND1Q9NSA2 647 aa15.47■□□□□ 0.07
HDAC4-214ENST00000535493 INTS13Q9NVM9 706 aa15.47■□□□□ 0.07
HDAC4-214ENST00000535493 A0A0U1RQJ8 604 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 VWA3AA6NCI4 1184 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 YEATS4O95619 227 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 A1BGP04217 495 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 CSB-PGBD3P0DP91 1061 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 PHKG2P15735 406 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 BMP6P22004 513 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 CMA1P23946 247 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 CHRNA2Q15822 529 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 GRAMD1CQ8IYS0 662 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 ATRIPQ8WXE1 791 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 NBPF26B4DH59 902 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 ZRANB2O95218 330 aaKnown RBP eCLIP15.46■□□□□ 0.07
HDAC4-214ENST00000535493 ATP2B1P20020 1258 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 IMMTQ16891 758 aaKnown RBP15.46■□□□□ 0.07
HDAC4-214ENST00000535493 NBPF14Q5TI25 921 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 NBPF10Q6P3W6 841 aaKnown RBP15.46■□□□□ 0.07
HDAC4-214ENST00000535493 NBPF15Q8N660 670 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 PCDHA5Q9Y5H7 936 aa15.46■□□□□ 0.07
HDAC4-214ENST00000535493 KDM6AO15550 1401 aaPredicted RBP15.46■□□□□ 0.06
HDAC4-214ENST00000535493 TADA3O75528 432 aa15.45■□□□□ 0.06
HDAC4-214ENST00000535493 TFRCP02786 760 aaKnown RBP15.45■□□□□ 0.06
HDAC4-214ENST00000535493 CYP2C19P33261 490 aa15.45■□□□□ 0.06
HDAC4-214ENST00000535493 ZAP70P43403 619 aa15.45■□□□□ 0.06
HDAC4-214ENST00000535493 GRIN1Q05586 938 aa15.45■□□□□ 0.06
HDAC4-214ENST00000535493 MTF1Q14872 753 aa15.45■□□□□ 0.06
HDAC4-214ENST00000535493 TAF3Q5VWG9 929 aa15.45■□□□□ 0.06
HDAC4-214ENST00000535493 RALYLQ86SE5 291 aaKnown RBP15.45■□□□□ 0.06
HDAC4-214ENST00000535493 METTL16Q86W50 562 aaKnown RBP15.45■□□□□ 0.06
HDAC4-214ENST00000535493 BPIFA3Q9BQP9 254 aa15.45■□□□□ 0.06
HDAC4-214ENST00000535493 ALG1Q9BT22 464 aa15.45■□□□□ 0.06
HDAC4-214ENST00000535493 APPP05067 770 aa15.45■□□□□ 0.06
HDAC4-214ENST00000535493 MYL5Q02045 173 aa15.45■□□□□ 0.06
HDAC4-214ENST00000535493 PPP2R2CQ9Y2T4 447 aa15.45■□□□□ 0.06
HDAC4-214ENST00000535493 MRC1P22897 1456 aa15.45■□□□□ 0.06
HDAC4-214ENST00000535493 CYP27B1O15528 508 aa15.45■□□□□ 0.06
HDAC4-214ENST00000535493 CAPN2P17655 700 aa15.45■□□□□ 0.06
HDAC4-214ENST00000535493 SLC39A14Q15043 492 aa15.45■□□□□ 0.06
HDAC4-214ENST00000535493 MB21D2Q8IYB1 491 aaPredicted RBP15.45■□□□□ 0.06
HDAC4-214ENST00000535493 SMARCE1Q969G3 411 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms