RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 FOXN1O15353 648 aa11.72□□□□□ -0.53
CDCA3-204ENST00000535406 AOC2O75106 756 aa11.72□□□□□ -0.53
CDCA3-204ENST00000535406 NF2P35240 595 aa11.72□□□□□ -0.53
CDCA3-204ENST00000535406 MAP2K2P36507 400 aa11.72□□□□□ -0.53
CDCA3-204ENST00000535406 FKBP1BP68106 108 aa11.72□□□□□ -0.53
CDCA3-204ENST00000535406 RGMBQ6NW40 437 aa11.72□□□□□ -0.53
CDCA3-204ENST00000535406 WBP1LQ9NX94 342 aa11.72□□□□□ -0.53
CDCA3-204ENST00000535406 SERPINA10Q9UK55 444 aa11.72□□□□□ -0.53
CDCA3-204ENST00000535406 CIZ1Q9ULV3 898 aaPredicted RBP11.72□□□□□ -0.53
CDCA3-204ENST00000535406 PCDHAC2Q9Y5I4 1007 aa11.72□□□□□ -0.53
CDCA3-204ENST00000535406 RLBP1P12271 317 aa11.71□□□□□ -0.53
CDCA3-204ENST00000535406 NOGQ13253 232 aa11.71□□□□□ -0.53
CDCA3-204ENST00000535406 PRAMEF18Q5VWM3 479 aa11.71□□□□□ -0.53
CDCA3-204ENST00000535406 BEGAINQ9BUH8 593 aa11.71□□□□□ -0.53
CDCA3-204ENST00000535406 VEZTQ9HBM0 779 aa11.71□□□□□ -0.53
CDCA3-204ENST00000535406 PNMA6EA0A0J9YXQ4 647 aa11.7□□□□□ -0.54
CDCA3-204ENST00000535406 CLRN2A0PK11 232 aa11.7□□□□□ -0.54
CDCA3-204ENST00000535406 CTCFP49711 727 aaPredicted RBP11.7□□□□□ -0.54
CDCA3-204ENST00000535406 ZNF157P51786 506 aaPredicted RBP11.7□□□□□ -0.54
CDCA3-204ENST00000535406 TTLL12Q14166 644 aaPredicted RBP11.7□□□□□ -0.54
CDCA3-204ENST00000535406 COL13A1Q5TAT6 717 aaPredicted RBP11.7□□□□□ -0.54
CDCA3-204ENST00000535406 PRMT6Q96LA8 375 aaPredicted RBP11.7□□□□□ -0.54
CDCA3-204ENST00000535406 GNL3LQ9NVN8 582 aaKnown RBP11.7□□□□□ -0.54
CDCA3-204ENST00000535406 PPP2R3BQ9Y5P8 575 aa11.7□□□□□ -0.54
CDCA3-204ENST00000535406 MAST3O60307 1309 aa11.69□□□□□ -0.54
CDCA3-204ENST00000535406 CRKP46108 304 aa11.69□□□□□ -0.54
CDCA3-204ENST00000535406 GRIK5Q16478 980 aa11.69□□□□□ -0.54
CDCA3-204ENST00000535406 WDR66Q8TBY9 1149 aa11.69□□□□□ -0.54
CDCA3-204ENST00000535406 TEKT1Q969V4 418 aa11.69□□□□□ -0.54
CDCA3-204ENST00000535406 CCDC102AQ96A19 550 aa11.69□□□□□ -0.54
CDCA3-204ENST00000535406 DEFB129Q9H1M3 183 aa11.69□□□□□ -0.54
CDCA3-204ENST00000535406 C1orf115Q9H7X2 142 aa11.69□□□□□ -0.54
CDCA3-204ENST00000535406 SUGT1Q9Y2Z0 365 aa11.69□□□□□ -0.54
CDCA3-204ENST00000535406 AOX1Q06278 1338 aa11.69□□□□□ -0.54
CDCA3-204ENST00000535406 A0A1B0GUL7 405 aa11.68□□□□□ -0.54
CDCA3-204ENST00000535406 FAM155AB1AL88 458 aaPredicted RBP11.68□□□□□ -0.54
CDCA3-204ENST00000535406 SEMA3EO15041 775 aa11.68□□□□□ -0.54
CDCA3-204ENST00000535406 SLC10A3P09131 477 aa11.68□□□□□ -0.54
CDCA3-204ENST00000535406 MS4A1P11836 297 aa11.68□□□□□ -0.54
CDCA3-204ENST00000535406 ADORA1P30542 326 aa11.68□□□□□ -0.54
CDCA3-204ENST00000535406 PHKA1P46020 1223 aa11.68□□□□□ -0.54
CDCA3-204ENST00000535406 HDLBPQ00341 1268 aaKnown RBP11.68□□□□□ -0.54
CDCA3-204ENST00000535406 TFCP2Q12800 502 aa11.68□□□□□ -0.54
CDCA3-204ENST00000535406 G3BP1Q13283 466 aaKnown RBP eCLIP11.68□□□□□ -0.54
CDCA3-204ENST00000535406 TNFAIP1Q13829 316 aa11.68□□□□□ -0.54
CDCA3-204ENST00000535406 MOB2Q70IA6 237 aa11.68□□□□□ -0.54
CDCA3-204ENST00000535406 AKAP2Q9Y2D5 859 aa11.68□□□□□ -0.54
CDCA3-204ENST00000535406 SSC5DA1L4H1 1573 aa11.68□□□□□ -0.54
CDCA3-204ENST00000535406 ZBTB7BO15156 539 aaPredicted RBP11.67□□□□□ -0.54
CDCA3-204ENST00000535406 CCDC102BQ68D86 513 aa11.67□□□□□ -0.54
CDCA3-204ENST00000535406 ARMC9Q7Z3E5 817 aa11.67□□□□□ -0.54
CDCA3-204ENST00000535406 RASAL3Q86YV0 1011 aa11.67□□□□□ -0.54
CDCA3-204ENST00000535406 PANK1Q8TE04 598 aa11.67□□□□□ -0.54
CDCA3-204ENST00000535406 TDRD3Q9H7E2 651 aaKnown RBP11.67□□□□□ -0.54
CDCA3-204ENST00000535406 PRDM10Q9NQV6 1147 aa11.67□□□□□ -0.54
CDCA3-204ENST00000535406 ZNF70Q9UC06 446 aaPredicted RBP11.67□□□□□ -0.54
CDCA3-204ENST00000535406 RCAN3Q9UKA8 241 aa11.67□□□□□ -0.54
CDCA3-204ENST00000535406 DENND2AQ9ULE3 1009 aa11.67□□□□□ -0.54
CDCA3-204ENST00000535406 UBE2Q2LH0YL09 131 aa11.66□□□□□ -0.54
CDCA3-204ENST00000535406 CA12O43570 354 aa11.66□□□□□ -0.54
CDCA3-204ENST00000535406 HSPA8P11142 646 aaKnown RBP11.66□□□□□ -0.54
CDCA3-204ENST00000535406 LBX1P52954 281 aa11.66□□□□□ -0.54
CDCA3-204ENST00000535406 TIMM10P62072 90 aa11.66□□□□□ -0.54
CDCA3-204ENST00000535406 ATP8B2P98198 1209 aa11.66□□□□□ -0.54
CDCA3-204ENST00000535406 OS9Q13438 667 aaPredicted RBP11.66□□□□□ -0.54
CDCA3-204ENST00000535406 PRKG1Q13976 671 aa11.66□□□□□ -0.54
CDCA3-204ENST00000535406 RASA3Q14644 834 aa11.66□□□□□ -0.54
CDCA3-204ENST00000535406 MVPQ14764 893 aaKnown RBP11.66□□□□□ -0.54
CDCA3-204ENST00000535406 SSH3Q8TE77 659 aa11.66□□□□□ -0.54
CDCA3-204ENST00000535406 XAGE2Q96GT9 111 aa11.66□□□□□ -0.54
CDCA3-204ENST00000535406 ZDHHC15Q96MV8 337 aa11.66□□□□□ -0.54
CDCA3-204ENST00000535406 ZIC5Q96T25 663 aa11.66□□□□□ -0.54
CDCA3-204ENST00000535406 SALL1Q9NSC2 1324 aa11.66□□□□□ -0.54
CDCA3-204ENST00000535406 LDHBP07195 334 aaKnown RBP11.65□□□□□ -0.54
CDCA3-204ENST00000535406 PRKCSHP14314 528 aaPredicted RBP11.65□□□□□ -0.54
CDCA3-204ENST00000535406 PRDX5P30044 214 aa11.65□□□□□ -0.54
CDCA3-204ENST00000535406 TNNI2P48788 182 aa11.65□□□□□ -0.54
CDCA3-204ENST00000535406 KIF23Q02241 960 aaPredicted RBP11.65□□□□□ -0.54
CDCA3-204ENST00000535406 RASGRF1Q13972 1273 aa11.65□□□□□ -0.54
CDCA3-204ENST00000535406 SUPT20HL1Q3ZLR7 823 aa11.65□□□□□ -0.54
CDCA3-204ENST00000535406 IFFO2Q5TF58 517 aa11.65□□□□□ -0.54
CDCA3-204ENST00000535406 TNS4Q8IZW8 715 aa11.65□□□□□ -0.54
CDCA3-204ENST00000535406 ZGPATQ8N5A5 531 aaKnown RBP11.65□□□□□ -0.54
CDCA3-204ENST00000535406 NEUROD6Q96NK8 337 aa11.65□□□□□ -0.54
CDCA3-204ENST00000535406 TMOD2Q9NZR1 351 aa11.65□□□□□ -0.54
CDCA3-204ENST00000535406 ANGEL1Q9UNK9 670 aaKnown RBP11.65□□□□□ -0.54
CDCA3-204ENST00000535406 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.65□□□□□ -0.54
CDCA3-204ENST00000535406 PDS5AQ29RF7 1337 aaKnown RBP11.65□□□□□ -0.54
CDCA3-204ENST00000535406 TCP10L2B9ZVM9 353 aa11.64□□□□□ -0.55
CDCA3-204ENST00000535406 PPP1R12BO60237 982 aaPredicted RBP11.64□□□□□ -0.55
CDCA3-204ENST00000535406 SURF6O75683 361 aaKnown RBP11.64□□□□□ -0.55
CDCA3-204ENST00000535406 GORABQ5T7V8 394 aa11.64□□□□□ -0.55
CDCA3-204ENST00000535406 NBPF12Q5TAG4 269 aaPredicted RBP11.64□□□□□ -0.55
CDCA3-204ENST00000535406 CEP85Q6P2H3 762 aa11.64□□□□□ -0.55
CDCA3-204ENST00000535406 HHIPL2Q6UWX4 724 aa11.64□□□□□ -0.55
CDCA3-204ENST00000535406 MRIQ9BWK5 157 aa11.64□□□□□ -0.55
CDCA3-204ENST00000535406 TSKSQ9UJT2 592 aa11.64□□□□□ -0.55
CDCA3-204ENST00000535406 FZD1Q9UP38 647 aa11.64□□□□□ -0.55
CDCA3-204ENST00000535406 AKAP11Q9UKA4 1901 aa11.64□□□□□ -0.55
CDCA3-204ENST00000535406 OTOFQ9HC10 1997 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms