RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 MYH13Q9UKX3 1938 aa17.53■□□□□ 0.4
SF3B2-215ENST00000534307 SLC5A1P13866 664 aa17.52■□□□□ 0.4
SF3B2-215ENST00000534307 IL15P40933 162 aaPredicted RBP17.52■□□□□ 0.4
SF3B2-215ENST00000534307 CTU1Q7Z7A3 348 aaKnown RBP17.52■□□□□ 0.4
SF3B2-215ENST00000534307 TBC1D22AQ8WUA7 517 aa17.52■□□□□ 0.4
SF3B2-215ENST00000534307 PPP2R3BQ9Y5P8 575 aa17.52■□□□□ 0.4
SF3B2-215ENST00000534307 CLRN2A0PK11 232 aa17.51■□□□□ 0.39
SF3B2-215ENST00000534307 UBE2Q2LH0YL09 131 aa17.51■□□□□ 0.39
SF3B2-215ENST00000534307 MYO1BO43795 1136 aa17.51■□□□□ 0.39
SF3B2-215ENST00000534307 CHAF1AQ13111 956 aaPredicted RBP17.51■□□□□ 0.39
SF3B2-215ENST00000534307 ZKSCAN2Q63HK3 967 aa17.51■□□□□ 0.39
SF3B2-215ENST00000534307 TMEM57Q8N5G2 664 aa17.51■□□□□ 0.39
SF3B2-215ENST00000534307 CLUAP1Q96AJ1 413 aa17.51■□□□□ 0.39
SF3B2-215ENST00000534307 CEP126Q9P2H0 1117 aa17.51■□□□□ 0.39
SF3B2-215ENST00000534307 ZBTB22O15209 634 aa17.5■□□□□ 0.39
SF3B2-215ENST00000534307 SRGAP3O43295 1099 aa17.5■□□□□ 0.39
SF3B2-215ENST00000534307 NF2P35240 595 aa17.5■□□□□ 0.39
SF3B2-215ENST00000534307 ATP2B3Q16720 1220 aa17.5■□□□□ 0.39
SF3B2-215ENST00000534307 SPDYE2Q495Y8 402 aa17.5■□□□□ 0.39
SF3B2-215ENST00000534307 FRAT2O75474 233 aaPredicted RBP17.49■□□□□ 0.39
SF3B2-215ENST00000534307 GNAI2P04899 355 aa17.49■□□□□ 0.39
SF3B2-215ENST00000534307 CRKP46108 304 aa17.49■□□□□ 0.39
SF3B2-215ENST00000534307 RBM5P52756 815 aaKnown RBP eCLIP17.49■□□□□ 0.39
SF3B2-215ENST00000534307 HDLBPQ00341 1268 aaKnown RBP17.49■□□□□ 0.39
SF3B2-215ENST00000534307 LDLRAD1Q5T700 205 aa17.49■□□□□ 0.39
SF3B2-215ENST00000534307 DZIP1LQ8IYY4 767 aaKnown RBP17.49■□□□□ 0.39
SF3B2-215ENST00000534307 CSRNP1Q96S65 589 aa17.49■□□□□ 0.39
SF3B2-215ENST00000534307 HPS5Q9UPZ3 1129 aa17.49■□□□□ 0.39
SF3B2-215ENST00000534307 SUGT1Q9Y2Z0 365 aa17.49■□□□□ 0.39
SF3B2-215ENST00000534307 SZT2Q5T011 3432 aa17.48■□□□□ 0.39
SF3B2-215ENST00000534307 MAP3K11Q16584 847 aa17.48■□□□□ 0.39
SF3B2-215ENST00000534307 MRIQ9BWK5 157 aa17.48■□□□□ 0.39
SF3B2-215ENST00000534307 ZNF70Q9UC06 446 aaPredicted RBP17.48■□□□□ 0.39
SF3B2-215ENST00000534307 TTLL12Q14166 644 aaPredicted RBP17.47■□□□□ 0.39
SF3B2-215ENST00000534307 RASA3Q14644 834 aa17.47■□□□□ 0.39
SF3B2-215ENST00000534307 ZDHHC15Q96MV8 337 aa17.47■□□□□ 0.39
SF3B2-215ENST00000534307 TDRD3Q9H7E2 651 aaKnown RBP17.47■□□□□ 0.39
SF3B2-215ENST00000534307 VEZTQ9HBM0 779 aa17.47■□□□□ 0.39
SF3B2-215ENST00000534307 RBBP6Q7Z6E9 1792 aaKnown RBP17.47■□□□□ 0.39
SF3B2-215ENST00000534307 PNMA6EA0A0J9YXQ4 647 aa17.46■□□□□ 0.39
SF3B2-215ENST00000534307 RLBP1P12271 317 aa17.46■□□□□ 0.39
SF3B2-215ENST00000534307 ADORA1P30542 326 aa17.46■□□□□ 0.39
SF3B2-215ENST00000534307 ARMC9Q7Z3E5 817 aa17.46■□□□□ 0.39
SF3B2-215ENST00000534307 WDR66Q8TBY9 1149 aa17.46■□□□□ 0.39
SF3B2-215ENST00000534307 TEKT1Q969V4 418 aa17.46■□□□□ 0.39
SF3B2-215ENST00000534307 TEPSINQ96N21 525 aa17.46■□□□□ 0.39
SF3B2-215ENST00000534307 FZD1Q9UP38 647 aa17.46■□□□□ 0.39
SF3B2-215ENST00000534307 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.46■□□□□ 0.39
SF3B2-215ENST00000534307 LAMB1P07942 1786 aa17.45■□□□□ 0.38
SF3B2-215ENST00000534307 KIAA0100Q14667 2235 aaKnown RBP17.45■□□□□ 0.38
SF3B2-215ENST00000534307 PHKA1P46020 1223 aa17.45■□□□□ 0.38
SF3B2-215ENST00000534307 TNFAIP1Q13829 316 aa17.45■□□□□ 0.38
SF3B2-215ENST00000534307 PRKG1Q13976 671 aa17.45■□□□□ 0.38
SF3B2-215ENST00000534307 NBPF12Q5TAG4 269 aaPredicted RBP17.45■□□□□ 0.38
SF3B2-215ENST00000534307 APOBEC3HQ6NTF7 200 aaKnown RBP17.45■□□□□ 0.38
SF3B2-215ENST00000534307 CDAN1Q8IWY9 1227 aa17.45■□□□□ 0.38
SF3B2-215ENST00000534307 REM2Q8IYK8 340 aaPredicted RBP17.45■□□□□ 0.38
SF3B2-215ENST00000534307 ANGEL1Q9UNK9 670 aaKnown RBP17.45■□□□□ 0.38
SF3B2-215ENST00000534307 MAST3O60307 1309 aa17.45■□□□□ 0.38
SF3B2-215ENST00000534307 SALL1Q9NSC2 1324 aa17.45■□□□□ 0.38
SF3B2-215ENST00000534307 OTOFQ9HC10 1997 aa17.44■□□□□ 0.38
SF3B2-215ENST00000534307 SEMA3EO15041 775 aa17.44■□□□□ 0.38
SF3B2-215ENST00000534307 TFCP2Q12800 502 aa17.44■□□□□ 0.38
SF3B2-215ENST00000534307 SUPT20HL1Q3ZLR7 823 aa17.44■□□□□ 0.38
SF3B2-215ENST00000534307 CCDC102BQ68D86 513 aa17.44■□□□□ 0.38
SF3B2-215ENST00000534307 UNCXA6NJT0 531 aa17.43■□□□□ 0.38
SF3B2-215ENST00000534307 TIMM10P62072 90 aa17.43■□□□□ 0.38
SF3B2-215ENST00000534307 HHIPL2Q6UWX4 724 aa17.43■□□□□ 0.38
SF3B2-215ENST00000534307 GNL3LQ9NVN8 582 aaKnown RBP17.43■□□□□ 0.38
SF3B2-215ENST00000534307 CEP290O15078 2479 aa17.43■□□□□ 0.38
SF3B2-215ENST00000534307 PDS5AQ29RF7 1337 aaKnown RBP17.43■□□□□ 0.38
SF3B2-215ENST00000534307 A0A1B0GUL7 405 aa17.42■□□□□ 0.38
SF3B2-215ENST00000534307 ZBTB7BO15156 539 aaPredicted RBP17.42■□□□□ 0.38
SF3B2-215ENST00000534307 PPP1R12BO60237 982 aaPredicted RBP17.42■□□□□ 0.38
SF3B2-215ENST00000534307 PRDX5P30044 214 aa17.42■□□□□ 0.38
SF3B2-215ENST00000534307 POLA2Q14181 598 aa17.42■□□□□ 0.38
SF3B2-215ENST00000534307 SPRYD7Q5W111 196 aa17.42■□□□□ 0.38
SF3B2-215ENST00000534307 FTSJ3Q8IY81 847 aaKnown RBP17.42■□□□□ 0.38
SF3B2-215ENST00000534307 SSH3Q8TE77 659 aa17.42■□□□□ 0.38
SF3B2-215ENST00000534307 TMEM39BQ9GZU3 492 aa17.42■□□□□ 0.38
SF3B2-215ENST00000534307 DENND2AQ9ULE3 1009 aa17.42■□□□□ 0.38
SF3B2-215ENST00000534307 AKAP2Q9Y2D5 859 aa17.42■□□□□ 0.38
SF3B2-215ENST00000534307 TCP10L2B9ZVM9 353 aa17.41■□□□□ 0.38
SF3B2-215ENST00000534307 USP2O75604 605 aaPredicted RBP17.41■□□□□ 0.38
SF3B2-215ENST00000534307 TM4SF4P48230 202 aa17.41■□□□□ 0.38
SF3B2-215ENST00000534307 CACNB3P54284 484 aa17.41■□□□□ 0.38
SF3B2-215ENST00000534307 RASGRF1Q13972 1273 aa17.41■□□□□ 0.38
SF3B2-215ENST00000534307 PKN2Q16513 984 aaKnown RBP17.41■□□□□ 0.38
SF3B2-215ENST00000534307 FKBP1CQ5VVH2 108 aa17.41■□□□□ 0.38
SF3B2-215ENST00000534307 ZNF296Q8WUU4 475 aaPredicted RBP17.41■□□□□ 0.38
SF3B2-215ENST00000534307 XAGE2Q96GT9 111 aa17.41■□□□□ 0.38
SF3B2-215ENST00000534307 CLMNQ96JQ2 1002 aa17.41■□□□□ 0.38
SF3B2-215ENST00000534307 TNNI2P48788 182 aa17.4■□□□□ 0.38
SF3B2-215ENST00000534307 ATP8B2P98198 1209 aa17.4■□□□□ 0.38
SF3B2-215ENST00000534307 FAM83AQ86UY5 434 aa17.4■□□□□ 0.38
SF3B2-215ENST00000534307 ITPRIPQ8IWB1 547 aa17.4■□□□□ 0.38
SF3B2-215ENST00000534307 DAGLAQ9Y4D2 1042 aa17.4■□□□□ 0.38
SF3B2-215ENST00000534307 LDHBP07195 334 aaKnown RBP17.39■□□□□ 0.37
SF3B2-215ENST00000534307 MKRN3Q13064 507 aaKnown RBP17.39■□□□□ 0.37
SF3B2-215ENST00000534307 DIXDC1Q155Q3 683 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms