RNA–Protein interactions for RNA: ENST00000534290.1

NCAPD3-212, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 352 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-212ENST00000534290 AGBL3Q8NEM8 1001 aa12.89□□□□□ -0.35
NCAPD3-212ENST00000534290 JARID2Q92833 1246 aaPredicted RBP12.89□□□□□ -0.35
NCAPD3-212ENST00000534290 CCDC85AQ96PX6 553 aaPredicted RBP12.89□□□□□ -0.35
NCAPD3-212ENST00000534290 MYD88Q99836 296 aa12.89□□□□□ -0.35
NCAPD3-212ENST00000534290 IL1RAPL2Q9NP60 686 aa12.89□□□□□ -0.35
NCAPD3-212ENST00000534290 ANO2Q9NQ90 1003 aa12.89□□□□□ -0.35
NCAPD3-212ENST00000534290 DIAPH3Q9NSV4 1193 aa12.89□□□□□ -0.35
NCAPD3-212ENST00000534290 DDX60Q8IY21 1712 aaKnown RBP12.88□□□□□ -0.35
NCAPD3-212ENST00000534290 AK9Q5TCS8 1911 aa12.88□□□□□ -0.35
NCAPD3-212ENST00000534290 USP17L8P0C7I0 530 aa12.88□□□□□ -0.35
NCAPD3-212ENST00000534290 RAB3GAP1Q15042 981 aa12.88□□□□□ -0.35
NCAPD3-212ENST00000534290 CCDC191Q8NCU4 936 aa12.88□□□□□ -0.35
NCAPD3-212ENST00000534290 MYOZ2Q9NPC6 264 aa12.88□□□□□ -0.35
NCAPD3-212ENST00000534290 COL4A1P02462 1669 aa12.88□□□□□ -0.35
NCAPD3-212ENST00000534290 POLR2AP24928 1970 aaKnown RBP12.88□□□□□ -0.35
NCAPD3-212ENST00000534290 PDE8AO60658 829 aa12.87□□□□□ -0.35
NCAPD3-212ENST00000534290 PCCAP05165 728 aaPredicted RBP12.87□□□□□ -0.35
NCAPD3-212ENST00000534290 FKBP1BP68106 108 aa12.87□□□□□ -0.35
NCAPD3-212ENST00000534290 PODNQ7Z5L7 613 aa12.87□□□□□ -0.35
NCAPD3-212ENST00000534290 ANKRD18AQ8IVF6 992 aa12.87□□□□□ -0.35
NCAPD3-212ENST00000534290 IL17RAQ96F46 866 aa12.87□□□□□ -0.35
NCAPD3-212ENST00000534290 GMLQ99445 158 aa12.87□□□□□ -0.35
NCAPD3-212ENST00000534290 CWC25Q9NXE8 425 aaPredicted RBP12.87□□□□□ -0.35
NCAPD3-212ENST00000534290 USP17L3A6NCW0 530 aa12.86□□□□□ -0.35
NCAPD3-212ENST00000534290 USP17L4A6NCW7 530 aa12.86□□□□□ -0.35
NCAPD3-212ENST00000534290 ATP2B4P23634 1241 aa12.86□□□□□ -0.35
NCAPD3-212ENST00000534290 DDIT3P35638 169 aa12.86□□□□□ -0.35
NCAPD3-212ENST00000534290 NEK4P51957 841 aa12.86□□□□□ -0.35
NCAPD3-212ENST00000534290 SOX10P56693 466 aa12.86□□□□□ -0.35
NCAPD3-212ENST00000534290 CWF19L2Q2TBE0 894 aaKnown RBP12.86□□□□□ -0.35
NCAPD3-212ENST00000534290 USP17L1Q7RTZ2 530 aa12.86□□□□□ -0.35
NCAPD3-212ENST00000534290 RASAL3Q86YV0 1011 aa12.86□□□□□ -0.35
NCAPD3-212ENST00000534290 INTS4Q96HW7 963 aaKnown RBP12.86□□□□□ -0.35
NCAPD3-212ENST00000534290 COPRSQ9NQ92 184 aa12.86□□□□□ -0.35
NCAPD3-212ENST00000534290 SCAF8Q9UPN6 1271 aaKnown RBP12.86□□□□□ -0.35
NCAPD3-212ENST00000534290 XDHP47989 1333 aa12.86□□□□□ -0.35
NCAPD3-212ENST00000534290 WTIPA6NIX2 430 aaPredicted RBP12.85□□□□□ -0.35
NCAPD3-212ENST00000534290 TRAK2O60296 914 aa12.85□□□□□ -0.35
NCAPD3-212ENST00000534290 CLEC17AQ6ZS10 378 aa12.85□□□□□ -0.35
NCAPD3-212ENST00000534290 MOB2Q70IA6 237 aa12.85□□□□□ -0.35
NCAPD3-212ENST00000534290 CTU1Q7Z7A3 348 aaKnown RBP12.85□□□□□ -0.35
NCAPD3-212ENST00000534290 AACSQ86V21 672 aa12.85□□□□□ -0.35
NCAPD3-212ENST00000534290 PI4K2BQ8TCG2 481 aa12.85□□□□□ -0.35
NCAPD3-212ENST00000534290 SUCLG2Q96I99 432 aa12.85□□□□□ -0.35
NCAPD3-212ENST00000534290 BICC1Q9H694 974 aaKnown RBP12.85□□□□□ -0.35
NCAPD3-212ENST00000534290 RAD50Q92878 1312 aa12.85□□□□□ -0.35
NCAPD3-212ENST00000534290 PITPNM2Q9BZ72 1349 aa12.85□□□□□ -0.35
NCAPD3-212ENST00000534290 UBE2Q2LH0YL09 131 aa12.84□□□□□ -0.35
NCAPD3-212ENST00000534290 SGSM2O43147 1006 aa12.84□□□□□ -0.35
NCAPD3-212ENST00000534290 ZKSCAN1P17029 563 aaPredicted RBP12.84□□□□□ -0.35
NCAPD3-212ENST00000534290 LRRFIP1Q32MZ4 808 aaKnown RBP12.84□□□□□ -0.35
NCAPD3-212ENST00000534290 NBPF9Q3BBW0 867 aa12.84□□□□□ -0.35
NCAPD3-212ENST00000534290 RNF20Q5VTR2 975 aa12.84□□□□□ -0.35
NCAPD3-212ENST00000534290 PRAMEF18Q5VWM3 479 aa12.84□□□□□ -0.35
NCAPD3-212ENST00000534290 ZNF609O15014 1411 aa12.83□□□□□ -0.36
NCAPD3-212ENST00000534290 IGKV5-2P06315 115 aa12.83□□□□□ -0.36
NCAPD3-212ENST00000534290 HSPA4P34932 840 aa12.83□□□□□ -0.36
NCAPD3-212ENST00000534290 OGFOD1Q8N543 542 aa12.83□□□□□ -0.36
NCAPD3-212ENST00000534290 TNPO1Q92973 898 aaKnown RBP12.83□□□□□ -0.36
NCAPD3-212ENST00000534290 CDC5LQ99459 802 aaKnown RBP12.83□□□□□ -0.36
NCAPD3-212ENST00000534290 MXD3Q9BW11 206 aa12.83□□□□□ -0.36
NCAPD3-212ENST00000534290 FBXO3Q9UK99 471 aa12.83□□□□□ -0.36
NCAPD3-212ENST00000534290 MINPP1Q9UNW1 487 aa12.83□□□□□ -0.36
NCAPD3-212ENST00000534290 SCN9AQ15858 1988 aa12.83□□□□□ -0.36
NCAPD3-212ENST00000534290 TBC1D8O95759 1140 aa12.82□□□□□ -0.36
NCAPD3-212ENST00000534290 PSMA5P28066 241 aa12.82□□□□□ -0.36
NCAPD3-212ENST00000534290 CTSWP56202 376 aa12.82□□□□□ -0.36
NCAPD3-212ENST00000534290 TTLL12Q14166 644 aaPredicted RBP12.82□□□□□ -0.36
NCAPD3-212ENST00000534290 RABL6Q3YEC7 729 aaPredicted RBP12.82□□□□□ -0.36
NCAPD3-212ENST00000534290 DACT2Q5SW24 774 aa12.82□□□□□ -0.36
NCAPD3-212ENST00000534290 TTLL11Q8NHH1 800 aa12.82□□□□□ -0.36
NCAPD3-212ENST00000534290 ZSCAN31Q96LW9 406 aaPredicted RBP12.82□□□□□ -0.36
NCAPD3-212ENST00000534290 GREM2Q9H772 168 aa12.82□□□□□ -0.36
NCAPD3-212ENST00000534290 GPR108Q9NPR9 543 aa12.82□□□□□ -0.36
NCAPD3-212ENST00000534290 BSDC1Q9NW68 430 aaPredicted RBP12.82□□□□□ -0.36
NCAPD3-212ENST00000534290 PCDH10Q9P2E7 1040 aa12.82□□□□□ -0.36
NCAPD3-212ENST00000534290 HDAC9Q9UKV0 1011 aa12.82□□□□□ -0.36
NCAPD3-212ENST00000534290 HPS5Q9UPZ3 1129 aa12.82□□□□□ -0.36
NCAPD3-212ENST00000534290 GOLGA6L3A6NEY3 463 aa12.81□□□□□ -0.36
NCAPD3-212ENST00000534290 H7C1W4 665 aa12.81□□□□□ -0.36
NCAPD3-212ENST00000534290 KCNJ4P48050 445 aa12.81□□□□□ -0.36
NCAPD3-212ENST00000534290 TM4SF4P48230 202 aa12.81□□□□□ -0.36
NCAPD3-212ENST00000534290 PKN2Q16513 984 aaKnown RBP12.81□□□□□ -0.36
NCAPD3-212ENST00000534290 ZNF296Q8WUU4 475 aaPredicted RBP12.81□□□□□ -0.36
NCAPD3-212ENST00000534290 FBXW7Q969H0 707 aa12.81□□□□□ -0.36
NCAPD3-212ENST00000534290 CHMP4CQ96CF2 233 aa12.81□□□□□ -0.36
NCAPD3-212ENST00000534290 TM6SF1Q9BZW5 370 aa12.81□□□□□ -0.36
NCAPD3-212ENST00000534290 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.81□□□□□ -0.36
NCAPD3-212ENST00000534290 WNT10BO00744 389 aa12.8□□□□□ -0.36
NCAPD3-212ENST00000534290 NF2P35240 595 aa12.8□□□□□ -0.36
NCAPD3-212ENST00000534290 MKRN3Q13064 507 aaKnown RBP12.8□□□□□ -0.36
NCAPD3-212ENST00000534290 STRIP1Q5VSL9 837 aa12.8□□□□□ -0.36
NCAPD3-212ENST00000534290 RFX7Q2KHR2 1363 aa12.8□□□□□ -0.36
NCAPD3-212ENST00000534290 AKAP11Q9UKA4 1901 aa12.8□□□□□ -0.36
NCAPD3-212ENST00000534290 MED23Q9ULK4 1368 aa12.8□□□□□ -0.36
NCAPD3-212ENST00000534290 ATP5JP18859 108 aa12.79□□□□□ -0.36
NCAPD3-212ENST00000534290 NCLP19338 710 aaKnown RBP12.79□□□□□ -0.36
NCAPD3-212ENST00000534290 IL15P40933 162 aaPredicted RBP12.79□□□□□ -0.36
NCAPD3-212ENST00000534290 MMP14P50281 582 aa12.79□□□□□ -0.36
NCAPD3-212ENST00000534290 CUL4AQ13619 759 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms