RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 C12orf49Q9H741 205 aa6.2□□□□□ -1.42
HIPK3-206ENST00000534262 PARP2Q9UGN5 583 aa6.2□□□□□ -1.42
HIPK3-206ENST00000534262 USP21Q9UK80 565 aa6.2□□□□□ -1.42
HIPK3-206ENST00000534262 AK5Q9Y6K8 562 aa6.2□□□□□ -1.42
HIPK3-206ENST00000534262 F8W735 103 aaPredicted RBP6.19□□□□□ -1.42
HIPK3-206ENST00000534262 WISP1O95388 367 aa6.19□□□□□ -1.42
HIPK3-206ENST00000534262 IGHA1P01876 353 aa6.19□□□□□ -1.42
HIPK3-206ENST00000534262 WFDC12Q8WWY7 111 aa6.19□□□□□ -1.42
HIPK3-206ENST00000534262 SPOCK3Q9BQ16 436 aa6.19□□□□□ -1.42
HIPK3-206ENST00000534262 EIF4EBP3O60516 100 aaPredicted RBP6.18□□□□□ -1.42
HIPK3-206ENST00000534262 NOS3P29474 1203 aa6.18□□□□□ -1.42
HIPK3-206ENST00000534262 GSTT1P30711 240 aa6.18□□□□□ -1.42
HIPK3-206ENST00000534262 GATA4P43694 442 aa6.18□□□□□ -1.42
HIPK3-206ENST00000534262 DUOXA2Q1HG44 320 aa6.18□□□□□ -1.42
HIPK3-206ENST00000534262 GPAT2Q6NUI2 795 aa6.18□□□□□ -1.42
HIPK3-206ENST00000534262 KIAA1211Q6ZU35 1233 aa6.18□□□□□ -1.42
HIPK3-206ENST00000534262 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.18□□□□□ -1.42
HIPK3-206ENST00000534262 TMC4Q7Z404 712 aa6.18□□□□□ -1.42
HIPK3-206ENST00000534262 TXNRD3Q86VQ6 643 aa6.18□□□□□ -1.42
HIPK3-206ENST00000534262 AKTIPQ9H8T0 292 aa6.18□□□□□ -1.42
HIPK3-206ENST00000534262 FAM8A1Q9UBU6 413 aa6.18□□□□□ -1.42
HIPK3-206ENST00000534262 AKAP2Q9Y2D5 859 aa6.18□□□□□ -1.42
HIPK3-206ENST00000534262 MEGF11A6BM72 1044 aa6.17□□□□□ -1.42
HIPK3-206ENST00000534262 MSTNO14793 375 aa6.17□□□□□ -1.42
HIPK3-206ENST00000534262 ALX3O95076 343 aa6.17□□□□□ -1.42
HIPK3-206ENST00000534262 DLGAP3O95886 979 aa6.17□□□□□ -1.42
HIPK3-206ENST00000534262 EIF4BP23588 611 aaKnown RBP6.17□□□□□ -1.42
HIPK3-206ENST00000534262 IREB2P48200 963 aaKnown RBP6.17□□□□□ -1.42
HIPK3-206ENST00000534262 NLRP12P59046 1061 aa6.17□□□□□ -1.42
HIPK3-206ENST00000534262 GSTM4Q03013 218 aa6.17□□□□□ -1.42
HIPK3-206ENST00000534262 Q6ZS46 218 aa6.17□□□□□ -1.42
HIPK3-206ENST00000534262 UBASH3BQ8TF42 649 aa6.17□□□□□ -1.42
HIPK3-206ENST00000534262 SREK1Q8WXA9 508 aaKnown RBP6.17□□□□□ -1.42
HIPK3-206ENST00000534262 TRIM56Q9BRZ2 755 aaKnown RBP6.17□□□□□ -1.42
HIPK3-206ENST00000534262 SSBP4Q9BWG4 385 aaPredicted RBP6.17□□□□□ -1.42
HIPK3-206ENST00000534262 LOC100289279A0A1B0GTE1 492 aa6.16□□□□□ -1.42
HIPK3-206ENST00000534262 USP17L7P0C7H9 530 aa6.16□□□□□ -1.42
HIPK3-206ENST00000534262 ZNF157P51786 506 aaPredicted RBP6.16□□□□□ -1.42
HIPK3-206ENST00000534262 LDLRAD1Q5T700 205 aa6.16□□□□□ -1.42
HIPK3-206ENST00000534262 ACAD11Q709F0 780 aa6.16□□□□□ -1.42
HIPK3-206ENST00000534262 DZIP1LQ8IYY4 767 aaKnown RBP6.16□□□□□ -1.42
HIPK3-206ENST00000534262 DDX54Q8TDD1 881 aaKnown RBP6.16□□□□□ -1.42
HIPK3-206ENST00000534262 NECAB3Q96P71 396 aaPredicted RBP6.16□□□□□ -1.42
HIPK3-206ENST00000534262 TMEM39AQ9NV64 488 aa6.16□□□□□ -1.42
HIPK3-206ENST00000534262 PPM1HQ9ULR3 514 aa6.16□□□□□ -1.42
HIPK3-206ENST00000534262 CYP11A1P05108 521 aa6.15□□□□□ -1.42
HIPK3-206ENST00000534262 CTSBP07858 339 aa6.15□□□□□ -1.42
HIPK3-206ENST00000534262 XPCQ01831 940 aaPredicted RBP6.15□□□□□ -1.42
HIPK3-206ENST00000534262 PSMD2Q13200 908 aa6.15□□□□□ -1.42
HIPK3-206ENST00000534262 AGGF1Q8N302 714 aaeCLIP6.15□□□□□ -1.42
HIPK3-206ENST00000534262 DRC1Q96MC2 740 aa6.15□□□□□ -1.42
HIPK3-206ENST00000534262 FAM161BQ96MY7 647 aa6.15□□□□□ -1.42
HIPK3-206ENST00000534262 ECEL1O95672 775 aa6.14□□□□□ -1.43
HIPK3-206ENST00000534262 CTSHP09668 335 aa6.14□□□□□ -1.43
HIPK3-206ENST00000534262 MAOBP27338 520 aa6.14□□□□□ -1.43
HIPK3-206ENST00000534262 ZC3H6P61129 1189 aaKnown RBP6.14□□□□□ -1.43
HIPK3-206ENST00000534262 MRPL58Q14197 206 aaKnown RBP6.14□□□□□ -1.43
HIPK3-206ENST00000534262 POU4F3Q15319 338 aa6.14□□□□□ -1.43
HIPK3-206ENST00000534262 ZNF326Q5BKZ1 582 aaKnown RBP6.14□□□□□ -1.43
HIPK3-206ENST00000534262 EXOSC6Q5RKV6 272 aaKnown RBP6.14□□□□□ -1.43
HIPK3-206ENST00000534262 MEGF10Q96KG7 1140 aa6.14□□□□□ -1.43
HIPK3-206ENST00000534262 UBL7Q96S82 380 aaPredicted RBP6.14□□□□□ -1.43
HIPK3-206ENST00000534262 TMPRSS13Q9BYE2 586 aa6.14□□□□□ -1.43
HIPK3-206ENST00000534262 TPSG1Q9NRR2 321 aa6.14□□□□□ -1.43
HIPK3-206ENST00000534262 ENC1O14682 589 aa6.13□□□□□ -1.43
HIPK3-206ENST00000534262 SORBS3O60504 671 aa6.13□□□□□ -1.43
HIPK3-206ENST00000534262 PPP2R3AQ06190 1150 aa6.13□□□□□ -1.43
HIPK3-206ENST00000534262 AP3B2Q13367 1082 aa6.13□□□□□ -1.43
HIPK3-206ENST00000534262 PDZD3Q86UT5 571 aa6.13□□□□□ -1.43
HIPK3-206ENST00000534262 STK35Q8TDR2 534 aa6.13□□□□□ -1.43
HIPK3-206ENST00000534262 RUSC1Q9BVN2 902 aa6.13□□□□□ -1.43
HIPK3-206ENST00000534262 USP26Q9BXU7 913 aa6.13□□□□□ -1.43
HIPK3-206ENST00000534262 CEP44Q9C0F1 390 aa6.13□□□□□ -1.43
HIPK3-206ENST00000534262 RNF208Q9H0X6 261 aa6.13□□□□□ -1.43
HIPK3-206ENST00000534262 BMP6P22004 513 aa6.12□□□□□ -1.43
HIPK3-206ENST00000534262 ARNTP27540 789 aa6.12□□□□□ -1.43
HIPK3-206ENST00000534262 DOC2BQ14184 412 aa6.12□□□□□ -1.43
HIPK3-206ENST00000534262 TPTE2Q6XPS3 522 aa6.12□□□□□ -1.43
HIPK3-206ENST00000534262 USP31Q70CQ4 1352 aa6.12□□□□□ -1.43
HIPK3-206ENST00000534262 SMG8Q8ND04 991 aaKnown RBP6.12□□□□□ -1.43
HIPK3-206ENST00000534262 SUGCTQ9HAC7 445 aa6.12□□□□□ -1.43
HIPK3-206ENST00000534262 GPN3Q9UHW5 284 aaPredicted RBP6.12□□□□□ -1.43
HIPK3-206ENST00000534262 FBXO24O75426 580 aa6.11□□□□□ -1.43
HIPK3-206ENST00000534262 PAGE1O75459 146 aa6.11□□□□□ -1.43
HIPK3-206ENST00000534262 NME2P22392 152 aa6.11□□□□□ -1.43
HIPK3-206ENST00000534262 ZNF252P-AS1Q0IIN9 211 aa6.11□□□□□ -1.43
HIPK3-206ENST00000534262 NKAPLQ5M9Q1 402 aa6.11□□□□□ -1.43
HIPK3-206ENST00000534262 MEI1Q5TIA1 1274 aa6.11□□□□□ -1.43
HIPK3-206ENST00000534262 SV2BQ7L1I2 683 aa6.11□□□□□ -1.43
HIPK3-206ENST00000534262 FAM46AQ96IP4 442 aaKnown RBP6.11□□□□□ -1.43
HIPK3-206ENST00000534262 CORO1BQ9BR76 489 aa6.11□□□□□ -1.43
HIPK3-206ENST00000534262 CEP41Q9BYV8 373 aa6.11□□□□□ -1.43
HIPK3-206ENST00000534262 CACNA2D2Q9NY47 1150 aa6.11□□□□□ -1.43
HIPK3-206ENST00000534262 CADPSQ9ULU8 1353 aa6.1□□□□□ -1.43
HIPK3-206ENST00000534262 SYNGAP1Q96PV0 1343 aa6.1□□□□□ -1.43
HIPK3-206ENST00000534262 TIAF1O95411 115 aa6.1□□□□□ -1.43
HIPK3-206ENST00000534262 GSTP1P09211 210 aaKnown RBP6.1□□□□□ -1.43
HIPK3-206ENST00000534262 GLB1P16278 677 aa6.1□□□□□ -1.43
HIPK3-206ENST00000534262 CANXP27824 592 aaKnown RBP6.1□□□□□ -1.43
HIPK3-206ENST00000534262 ST13P50502 369 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms