RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ANGEL1Q9UNK9 670 aaKnown RBP12.99□□□□□ -0.33
CAPN1-225ENST00000533704 IL15P40933 162 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-225ENST00000533704 DZIP1LQ8IYY4 767 aaKnown RBP12.98□□□□□ -0.33
CAPN1-225ENST00000533704 ZNF70Q9UC06 446 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-225ENST00000533704 SERPINA10Q9UK55 444 aa12.98□□□□□ -0.33
CAPN1-225ENST00000533704 TCP10L2B9ZVM9 353 aa12.97□□□□□ -0.33
CAPN1-225ENST00000533704 TRPA1O75762 1119 aa12.97□□□□□ -0.33
CAPN1-225ENST00000533704 GNAI2P04899 355 aa12.97□□□□□ -0.33
CAPN1-225ENST00000533704 RASA3Q14644 834 aa12.97□□□□□ -0.33
CAPN1-225ENST00000533704 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
CAPN1-225ENST00000533704 NBPF12Q5TAG4 269 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-225ENST00000533704 FTSJ3Q8IY81 847 aaKnown RBP12.97□□□□□ -0.33
CAPN1-225ENST00000533704 TMEM57Q8N5G2 664 aa12.97□□□□□ -0.33
CAPN1-225ENST00000533704 CSRNP1Q96S65 589 aa12.97□□□□□ -0.33
CAPN1-225ENST00000533704 COPRSQ9NQ92 184 aa12.97□□□□□ -0.33
CAPN1-225ENST00000533704 FBXO3Q9UK99 471 aa12.97□□□□□ -0.33
CAPN1-225ENST00000533704 MYH2Q9UKX2 1941 aa12.97□□□□□ -0.33
CAPN1-225ENST00000533704 OTOFQ9HC10 1997 aa12.96□□□□□ -0.33
CAPN1-225ENST00000533704 ZBED9Q6R2W3 1325 aa12.96□□□□□ -0.33
CAPN1-225ENST00000533704 SSC5DA1L4H1 1573 aa12.96□□□□□ -0.33
CAPN1-225ENST00000533704 PPP1R12BO60237 982 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-225ENST00000533704 SUPT20HL1Q3ZLR7 823 aa12.96□□□□□ -0.33
CAPN1-225ENST00000533704 TEKT1Q969V4 418 aa12.96□□□□□ -0.33
CAPN1-225ENST00000533704 GNL3LQ9NVN8 582 aaKnown RBP12.96□□□□□ -0.33
CAPN1-225ENST00000533704 PPP2R3BQ9Y5P8 575 aa12.96□□□□□ -0.33
CAPN1-225ENST00000533704 MAST3O60307 1309 aa12.95□□□□□ -0.34
CAPN1-225ENST00000533704 ADORA1P30542 326 aa12.95□□□□□ -0.34
CAPN1-225ENST00000533704 CACNB3P54284 484 aa12.95□□□□□ -0.34
CAPN1-225ENST00000533704 TNFAIP1Q13829 316 aa12.95□□□□□ -0.34
CAPN1-225ENST00000533704 ITPRIPQ8IWB1 547 aa12.95□□□□□ -0.34
CAPN1-225ENST00000533704 WDR66Q8TBY9 1149 aa12.95□□□□□ -0.34
CAPN1-225ENST00000533704 RNF186Q9NXI6 227 aa12.95□□□□□ -0.34
CAPN1-225ENST00000533704 TMOD2Q9NZR1 351 aa12.95□□□□□ -0.34
CAPN1-225ENST00000533704 PHKA1P46020 1223 aa12.94□□□□□ -0.34
CAPN1-225ENST00000533704 TNNI2P48788 182 aa12.94□□□□□ -0.34
CAPN1-225ENST00000533704 HDLBPQ00341 1268 aaKnown RBP12.94□□□□□ -0.34
CAPN1-225ENST00000533704 TFCP2Q12800 502 aa12.94□□□□□ -0.34
CAPN1-225ENST00000533704 SLC10A4Q96EP9 437 aa12.94□□□□□ -0.34
CAPN1-225ENST00000533704 CLMNQ96JQ2 1002 aa12.94□□□□□ -0.34
CAPN1-225ENST00000533704 TMEM39BQ9GZU3 492 aa12.94□□□□□ -0.34
CAPN1-225ENST00000533704 C1orf115Q9H7X2 142 aa12.94□□□□□ -0.34
CAPN1-225ENST00000533704 PNMA6EA0A0J9YXQ4 647 aa12.93□□□□□ -0.34
CAPN1-225ENST00000533704 IREB2P48200 963 aaKnown RBP12.93□□□□□ -0.34
CAPN1-225ENST00000533704 TIMM10P62072 90 aa12.93□□□□□ -0.34
CAPN1-225ENST00000533704 MTX1Q13505 466 aa12.93□□□□□ -0.34
CAPN1-225ENST00000533704 LDLRAD1Q5T700 205 aa12.93□□□□□ -0.34
CAPN1-225ENST00000533704 CDAN1Q8IWY9 1227 aa12.93□□□□□ -0.34
CAPN1-225ENST00000533704 REM2Q8IYK8 340 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-225ENST00000533704 NEUROD6Q96NK8 337 aa12.93□□□□□ -0.34
CAPN1-225ENST00000533704 SAGE1Q9NXZ1 904 aa12.93□□□□□ -0.34
CAPN1-225ENST00000533704 A0A1B0GUL7 405 aa12.92□□□□□ -0.34
CAPN1-225ENST00000533704 LDHBP07195 334 aaKnown RBP12.92□□□□□ -0.34
CAPN1-225ENST00000533704 G3BP1Q13283 466 aaKnown RBP eCLIP12.92□□□□□ -0.34
CAPN1-225ENST00000533704 OS9Q13438 667 aaPredicted RBP12.92□□□□□ -0.34
CAPN1-225ENST00000533704 CCDC102BQ68D86 513 aa12.92□□□□□ -0.34
CAPN1-225ENST00000533704 XAGE2Q96GT9 111 aa12.92□□□□□ -0.34
CAPN1-225ENST00000533704 ABHD8Q96I13 439 aa12.92□□□□□ -0.34
CAPN1-225ENST00000533704 ZDHHC15Q96MV8 337 aa12.92□□□□□ -0.34
CAPN1-225ENST00000533704 DENND2AQ9ULE3 1009 aa12.92□□□□□ -0.34
CAPN1-225ENST00000533704 AKAP2Q9Y2D5 859 aa12.92□□□□□ -0.34
CAPN1-225ENST00000533704 SUGT1Q9Y2Z0 365 aa12.92□□□□□ -0.34
CAPN1-225ENST00000533704 USP2O75604 605 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-225ENST00000533704 RLBP1P12271 317 aa12.91□□□□□ -0.34
CAPN1-225ENST00000533704 PRDX5P30044 214 aa12.91□□□□□ -0.34
CAPN1-225ENST00000533704 DGKZQ13574 1117 aa12.91□□□□□ -0.34
CAPN1-225ENST00000533704 DIXDC1Q155Q3 683 aa12.91□□□□□ -0.34
CAPN1-225ENST00000533704 GORABQ5T7V8 394 aa12.91□□□□□ -0.34
CAPN1-225ENST00000533704 SPRYD7Q5W111 196 aa12.91□□□□□ -0.34
CAPN1-225ENST00000533704 WNK4Q96J92 1243 aa12.91□□□□□ -0.34
CAPN1-225ENST00000533704 SEMA3EO15041 775 aa12.9□□□□□ -0.34
CAPN1-225ENST00000533704 TBC1D8O95759 1140 aa12.9□□□□□ -0.34
CAPN1-225ENST00000533704 SREBF2Q12772 1141 aa12.9□□□□□ -0.34
CAPN1-225ENST00000533704 MVPQ14764 893 aaKnown RBP12.9□□□□□ -0.34
CAPN1-225ENST00000533704 MAP3K11Q16584 847 aa12.9□□□□□ -0.34
CAPN1-225ENST00000533704 APOBEC3HQ6NTF7 200 aaKnown RBP12.9□□□□□ -0.34
CAPN1-225ENST00000533704 HHIPL2Q6UWX4 724 aa12.9□□□□□ -0.34
CAPN1-225ENST00000533704 ANKRD13AQ8IZ07 590 aa12.9□□□□□ -0.34
CAPN1-225ENST00000533704 PANK1Q8TE04 598 aa12.9□□□□□ -0.34
CAPN1-225ENST00000533704 TEPSINQ96N21 525 aa12.9□□□□□ -0.34
CAPN1-225ENST00000533704 MCOLN1Q9GZU1 580 aa12.9□□□□□ -0.34
CAPN1-225ENST00000533704 ELP3Q9H9T3 547 aa12.9□□□□□ -0.34
CAPN1-225ENST00000533704 ABCF2Q9UG63 623 aa12.9□□□□□ -0.34
CAPN1-225ENST00000533704 DAGLAQ9Y4D2 1042 aa12.9□□□□□ -0.34
CAPN1-225ENST00000533704 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-225ENST00000533704 CCDC85CA6NKD9 419 aa12.89□□□□□ -0.35
CAPN1-225ENST00000533704 RASGRF1Q13972 1273 aa12.89□□□□□ -0.35
CAPN1-225ENST00000533704 DZIP1Q86YF9 867 aaKnown RBP12.89□□□□□ -0.35
CAPN1-225ENST00000533704 MRIQ9BWK5 157 aa12.89□□□□□ -0.35
CAPN1-225ENST00000533704 LAMB1P07942 1786 aa12.89□□□□□ -0.35
CAPN1-225ENST00000533704 DOCK2Q92608 1830 aa12.88□□□□□ -0.35
CAPN1-225ENST00000533704 MANSC4A6NHS7 340 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-225ENST00000533704 SURF6O75683 361 aaKnown RBP12.88□□□□□ -0.35
CAPN1-225ENST00000533704 TM4SF4P48230 202 aa12.88□□□□□ -0.35
CAPN1-225ENST00000533704 ATP8B2P98198 1209 aa12.88□□□□□ -0.35
CAPN1-225ENST00000533704 TCP10Q12799 353 aa12.88□□□□□ -0.35
CAPN1-225ENST00000533704 CDC42EP5Q6NZY7 148 aa12.88□□□□□ -0.35
CAPN1-225ENST00000533704 ZGPATQ8N5A5 531 aaKnown RBP12.88□□□□□ -0.35
CAPN1-225ENST00000533704 USP40Q9NVE5 1235 aa12.88□□□□□ -0.35
CAPN1-225ENST00000533704 CSADQ9Y600 493 aa12.88□□□□□ -0.35
CAPN1-225ENST00000533704 MYO5AQ9Y4I1 1855 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms