RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 PCDHAC2Q9Y5I4 1007 aa27.64■■■□□ 2.02
BEST1-207ENST00000533521 LBX1P52954 281 aa27.63■■■□□ 2.01
BEST1-207ENST00000533521 MAP3K11Q16584 847 aa27.63■■■□□ 2.01
BEST1-207ENST00000533521 SUPT20HL1Q3ZLR7 823 aa27.63■■■□□ 2.01
BEST1-207ENST00000533521 ARMC9Q7Z3E5 817 aa27.63■■■□□ 2.01
BEST1-207ENST00000533521 LDLRAD1Q5T700 205 aa27.62■■■□□ 2.01
BEST1-207ENST00000533521 TEKT1Q969V4 418 aa27.62■■■□□ 2.01
BEST1-207ENST00000533521 ZDHHC15Q96MV8 337 aa27.62■■■□□ 2.01
BEST1-207ENST00000533521 SALL1Q9NSC2 1324 aa27.62■■■□□ 2.01
BEST1-207ENST00000533521 HHIPL2Q6UWX4 724 aa27.61■■■□□ 2.01
BEST1-207ENST00000533521 RASAL3Q86YV0 1011 aa27.61■■■□□ 2.01
BEST1-207ENST00000533521 TNS4Q8IZW8 715 aa27.61■■■□□ 2.01
BEST1-207ENST00000533521 ZNF70Q9UC06 446 aaPredicted RBP27.61■■■□□ 2.01
BEST1-207ENST00000533521 DENND2AQ9ULE3 1009 aa27.61■■■□□ 2.01
BEST1-207ENST00000533521 PDS5AQ29RF7 1337 aaKnown RBP27.61■■■□□ 2.01
BEST1-207ENST00000533521 CLRN2A0PK11 232 aa27.6■■■□□ 2.01
BEST1-207ENST00000533521 UBE2Q2LH0YL09 131 aa27.6■■■□□ 2.01
BEST1-207ENST00000533521 ZBTB7BO15156 539 aaPredicted RBP27.6■■■□□ 2.01
BEST1-207ENST00000533521 MS4A1P11836 297 aa27.6■■■□□ 2.01
BEST1-207ENST00000533521 KIF23Q02241 960 aaPredicted RBP27.6■■■□□ 2.01
BEST1-207ENST00000533521 GRIK5Q16478 980 aa27.6■■■□□ 2.01
BEST1-207ENST00000533521 SAGE1Q9NXZ1 904 aa27.6■■■□□ 2.01
BEST1-207ENST00000533521 AKAP11Q9UKA4 1901 aa27.59■■■□□ 2.01
BEST1-207ENST00000533521 PNMA6EA0A0J9YXQ4 647 aa27.59■■■□□ 2.01
BEST1-207ENST00000533521 PPP1R12BO60237 982 aaPredicted RBP27.59■■■□□ 2.01
BEST1-207ENST00000533521 POLA2Q14181 598 aa27.59■■■□□ 2.01
BEST1-207ENST00000533521 FKBP1CQ5VVH2 108 aa27.59■■■□□ 2.01
BEST1-207ENST00000533521 ZIC5Q96T25 663 aa27.59■■■□□ 2.01
BEST1-207ENST00000533521 VEZTQ9HBM0 779 aa27.59■■■□□ 2.01
BEST1-207ENST00000533521 TTLL12Q14166 644 aaPredicted RBP27.58■■■□□ 2.01
BEST1-207ENST00000533521 RASA3Q14644 834 aa27.58■■■□□ 2.01
BEST1-207ENST00000533521 MOB2Q70IA6 237 aa27.58■■■□□ 2.01
BEST1-207ENST00000533521 SSH3Q8TE77 659 aa27.58■■■□□ 2.01
BEST1-207ENST00000533521 TDRD3Q9H7E2 651 aaKnown RBP27.58■■■□□ 2.01
BEST1-207ENST00000533521 AOX1Q06278 1338 aa27.58■■■□□ 2.01
BEST1-207ENST00000533521 RLBP1P12271 317 aa27.57■■■□□ 2
BEST1-207ENST00000533521 TNNI2P48788 182 aa27.57■■■□□ 2
BEST1-207ENST00000533521 ATP8B2P98198 1209 aa27.57■■■□□ 2
BEST1-207ENST00000533521 CCDC102BQ68D86 513 aa27.57■■■□□ 2
BEST1-207ENST00000533521 A0A1B0GUL7 405 aa27.56■■■□□ 2
BEST1-207ENST00000533521 PHKA1P46020 1223 aa27.56■■■□□ 2
BEST1-207ENST00000533521 TFCP2Q12800 502 aa27.56■■■□□ 2
BEST1-207ENST00000533521 G3BP1Q13283 466 aaKnown RBP eCLIP27.56■■■□□ 2
BEST1-207ENST00000533521 MVPQ14764 893 aaKnown RBP27.56■■■□□ 2
BEST1-207ENST00000533521 ZGPATQ8N5A5 531 aaKnown RBP27.56■■■□□ 2
BEST1-207ENST00000533521 CSRNP1Q96S65 589 aa27.56■■■□□ 2
BEST1-207ENST00000533521 SSC5DA1L4H1 1573 aa27.56■■■□□ 2
BEST1-207ENST00000533521 TIMM10P62072 90 aa27.55■■■□□ 2
BEST1-207ENST00000533521 APOBEC3HQ6NTF7 200 aaKnown RBP27.55■■■□□ 2
BEST1-207ENST00000533521 ITPRIPQ8IWB1 547 aa27.55■■■□□ 2
BEST1-207ENST00000533521 ANGEL1Q9UNK9 670 aaKnown RBP27.55■■■□□ 2
BEST1-207ENST00000533521 FAM83AQ86UY5 434 aa27.54■■■□□ 2
BEST1-207ENST00000533521 GPR108Q9NPR9 543 aa27.54■■■□□ 2
BEST1-207ENST00000533521 ADORA1P30542 326 aa27.53■■■□□ 2
BEST1-207ENST00000533521 NBPF12Q5TAG4 269 aaPredicted RBP27.53■■■□□ 2
BEST1-207ENST00000533521 XAGE2Q96GT9 111 aa27.53■■■□□ 2
BEST1-207ENST00000533521 TEPSINQ96N21 525 aa27.53■■■□□ 2
BEST1-207ENST00000533521 LDHBP07195 334 aaKnown RBP27.52■■■□□ 2
BEST1-207ENST00000533521 TMOD2Q9NZR1 351 aa27.52■■■□□ 2
BEST1-207ENST00000533521 NOP58Q9Y2X3 529 aaKnown RBP27.52■■■□□ 2
BEST1-207ENST00000533521 LAMB1P07942 1786 aa27.52■■■□□ 2
BEST1-207ENST00000533521 IREB2P48200 963 aaKnown RBP27.51■■□□□ 1.99
BEST1-207ENST00000533521 TM4SF4P48230 202 aa27.51■■□□□ 1.99
BEST1-207ENST00000533521 RASGRF1Q13972 1273 aa27.5■■□□□ 1.99
BEST1-207ENST00000533521 USP2O75604 605 aaPredicted RBP27.49■■□□□ 1.99
BEST1-207ENST00000533521 PRDX5P30044 214 aa27.49■■□□□ 1.99
BEST1-207ENST00000533521 SPRYD7Q5W111 196 aa27.49■■□□□ 1.99
BEST1-207ENST00000533521 SPTY2D1Q68D10 685 aaPredicted RBP27.49■■□□□ 1.99
BEST1-207ENST00000533521 HOOK2Q96ED9 719 aa27.49■■□□□ 1.99
BEST1-207ENST00000533521 SLC10A4Q96EP9 437 aa27.49■■□□□ 1.99
BEST1-207ENST00000533521 RNF186Q9NXI6 227 aa27.49■■□□□ 1.99
BEST1-207ENST00000533521 RPAP1Q9BWH6 1393 aaPredicted RBP27.48■■□□□ 1.99
BEST1-207ENST00000533521 TCP10L2B9ZVM9 353 aa27.48■■□□□ 1.99
BEST1-207ENST00000533521 ZBTB48P10074 688 aaPredicted RBP27.48■■□□□ 1.99
BEST1-207ENST00000533521 INHBEP58166 350 aa27.48■■□□□ 1.99
BEST1-207ENST00000533521 PRKG1Q13976 671 aa27.48■■□□□ 1.99
BEST1-207ENST00000533521 ANKRD13AQ8IZ07 590 aa27.48■■□□□ 1.99
BEST1-207ENST00000533521 FAM163AQ96GL9 167 aaPredicted RBP27.48■■□□□ 1.99
BEST1-207ENST00000533521 RCAN3Q9UKA8 241 aa27.48■■□□□ 1.99
BEST1-207ENST00000533521 SREBF2Q12772 1141 aa27.47■■□□□ 1.99
BEST1-207ENST00000533521 SLF2Q8IX21 1173 aa27.47■■□□□ 1.99
BEST1-207ENST00000533521 NEUROD6Q96NK8 337 aa27.47■■□□□ 1.99
BEST1-207ENST00000533521 DAGLAQ9Y4D2 1042 aa27.47■■□□□ 1.99
BEST1-207ENST00000533521 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.47■■□□□ 1.99
BEST1-207ENST00000533521 MYH2Q9UKX2 1941 aa27.46■■□□□ 1.99
BEST1-207ENST00000533521 ARID4AP29374 1257 aaPredicted RBP27.46■■□□□ 1.99
BEST1-207ENST00000533521 PANK1Q8TE04 598 aa27.46■■□□□ 1.99
BEST1-207ENST00000533521 TMEM39BQ9GZU3 492 aa27.46■■□□□ 1.99
BEST1-207ENST00000533521 CHMP4BQ9H444 224 aaKnown RBP27.46■■□□□ 1.99
BEST1-207ENST00000533521 SURF6O75683 361 aaKnown RBP27.45■■□□□ 1.98
BEST1-207ENST00000533521 UQCRFS1P1P0C7P4 283 aa27.45■■□□□ 1.98
BEST1-207ENST00000533521 GORABQ5T7V8 394 aa27.45■■□□□ 1.98
BEST1-207ENST00000533521 TSKSQ9UJT2 592 aa27.45■■□□□ 1.98
BEST1-207ENST00000533521 CASP8AP2Q9UKL3 1982 aa27.45■■□□□ 1.98
BEST1-207ENST00000533521 GAKO14976 1311 aa27.44■■□□□ 1.98
BEST1-207ENST00000533521 MANSC4A6NHS7 340 aaPredicted RBP27.44■■□□□ 1.98
BEST1-207ENST00000533521 IGSF3O75054 1194 aa27.44■■□□□ 1.98
BEST1-207ENST00000533521 TRPA1O75762 1119 aa27.44■■□□□ 1.98
BEST1-207ENST00000533521 NOM1Q5C9Z4 860 aaKnown RBP27.44■■□□□ 1.98
BEST1-207ENST00000533521 CEP85Q6P2H3 762 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms