RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 IQUBQ8NA54 791 aa19.96■□□□□ 0.79
PHRF1-205ENST00000533464 EAF2Q96CJ1 260 aaPredicted RBP19.96■□□□□ 0.79
PHRF1-205ENST00000533464 ZFYVE16Q7Z3T8 1539 aa19.96■□□□□ 0.79
PHRF1-205ENST00000533464 ZAP70P43403 619 aa19.96■□□□□ 0.79
PHRF1-205ENST00000533464 LPIN2Q92539 896 aa19.96■□□□□ 0.79
PHRF1-205ENST00000533464 MYO5CQ9NQX4 1742 aa19.96■□□□□ 0.79
PHRF1-205ENST00000533464 PRDM1O75626 825 aa19.96■□□□□ 0.79
PHRF1-205ENST00000533464 GNA11P29992 359 aa19.96■□□□□ 0.79
PHRF1-205ENST00000533464 HIBADHP31937 336 aaKnown RBP19.96■□□□□ 0.79
PHRF1-205ENST00000533464 BEND3Q5T5X7 828 aa19.96■□□□□ 0.79
PHRF1-205ENST00000533464 KRT79Q5XKE5 535 aa19.96■□□□□ 0.79
PHRF1-205ENST00000533464 NAA15Q9BXJ9 866 aaKnown RBP19.96■□□□□ 0.79
PHRF1-205ENST00000533464 MMRN2Q9H8L6 949 aa19.96■□□□□ 0.79
PHRF1-205ENST00000533464 TRAPPC3LQ5T215 181 aa19.96■□□□□ 0.79
PHRF1-205ENST00000533464 DTHD1Q6ZMT9 781 aa19.96■□□□□ 0.79
PHRF1-205ENST00000533464 PRPF4BQ13523 1007 aaKnown RBP19.95■□□□□ 0.78
PHRF1-205ENST00000533464 FAM135BQ49AJ0 1406 aa19.95■□□□□ 0.78
PHRF1-205ENST00000533464 CCDC113Q9H0I3 377 aa19.95■□□□□ 0.78
PHRF1-205ENST00000533464 RBM28Q9NW13 759 aaKnown RBP19.95■□□□□ 0.78
PHRF1-205ENST00000533464 SPDYE4A6NLX3 237 aa19.95■□□□□ 0.78
PHRF1-205ENST00000533464 PHKG2P15735 406 aa19.95■□□□□ 0.78
PHRF1-205ENST00000533464 RILPL1Q5EBL4 403 aa19.95■□□□□ 0.78
PHRF1-205ENST00000533464 AATKQ6ZMQ8 1374 aa19.95■□□□□ 0.78
PHRF1-205ENST00000533464 ANO1Q5XXA6 986 aa19.95■□□□□ 0.78
PHRF1-205ENST00000533464 SMARCC2Q8TAQ2 1214 aa19.95■□□□□ 0.78
PHRF1-205ENST00000533464 SLAIN2Q9P270 581 aa19.95■□□□□ 0.78
PHRF1-205ENST00000533464 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.95■□□□□ 0.78
PHRF1-205ENST00000533464 IFFO1Q0D2I5 559 aa19.95■□□□□ 0.78
PHRF1-205ENST00000533464 CTNNBL1Q8WYA6 563 aaPredicted RBP19.95■□□□□ 0.78
PHRF1-205ENST00000533464 ZNF174Q15697 407 aa19.94■□□□□ 0.78
PHRF1-205ENST00000533464 RNF216Q9NWF9 866 aaPredicted RBP19.94■□□□□ 0.78
PHRF1-205ENST00000533464 HDAC9Q9UKV0 1011 aa19.94■□□□□ 0.78
PHRF1-205ENST00000533464 ELP1O95163 1332 aa19.94■□□□□ 0.78
PHRF1-205ENST00000533464 VWA3AA6NCI4 1184 aa19.94■□□□□ 0.78
PHRF1-205ENST00000533464 PLIN2Q99541 437 aa19.94■□□□□ 0.78
PHRF1-205ENST00000533464 TM6SF1Q9BZW5 370 aa19.94■□□□□ 0.78
PHRF1-205ENST00000533464 CNBD1Q8NA66 436 aa19.94■□□□□ 0.78
PHRF1-205ENST00000533464 JAK2O60674 1132 aa19.94■□□□□ 0.78
PHRF1-205ENST00000533464 GOPCQ9HD26 462 aa19.94■□□□□ 0.78
PHRF1-205ENST00000533464 CCDC87Q9NVE4 849 aa19.94■□□□□ 0.78
PHRF1-205ENST00000533464 GSTTP1A0A1W2PQM5 241 aa19.93■□□□□ 0.78
PHRF1-205ENST00000533464 GADD45BO75293 160 aaPredicted RBP19.93■□□□□ 0.78
PHRF1-205ENST00000533464 DEXIO95424 95 aa19.93■□□□□ 0.78
PHRF1-205ENST00000533464 TCIRG1Q13488 830 aa19.93■□□□□ 0.78
PHRF1-205ENST00000533464 LMBRD1Q9NUN5 540 aa19.93■□□□□ 0.78
PHRF1-205ENST00000533464 GOLGA6L7A0A1B0GV03 622 aa19.93■□□□□ 0.78
PHRF1-205ENST00000533464 LEO1Q8WVC0 666 aaPredicted RBP19.93■□□□□ 0.78
PHRF1-205ENST00000533464 BMS1Q14692 1282 aaKnown RBP19.93■□□□□ 0.78
PHRF1-205ENST00000533464 CDC37L1Q7L3B6 337 aa19.93■□□□□ 0.78
PHRF1-205ENST00000533464 CCNL1Q9UK58 526 aaPredicted RBP19.93■□□□□ 0.78
PHRF1-205ENST00000533464 ERVV-2B6SEH9 535 aa19.93■□□□□ 0.78
PHRF1-205ENST00000533464 CCDC175P0C221 793 aa19.93■□□□□ 0.78
PHRF1-205ENST00000533464 MYL5Q02045 173 aa19.93■□□□□ 0.78
PHRF1-205ENST00000533464 PALD1Q9ULE6 856 aa19.93■□□□□ 0.78
PHRF1-205ENST00000533464 V9GY48 417 aaPredicted RBP19.93■□□□□ 0.78
PHRF1-205ENST00000533464 TEX11Q8IYF3 940 aa19.92■□□□□ 0.78
PHRF1-205ENST00000533464 LMTK3Q96Q04 1460 aa19.92■□□□□ 0.78
PHRF1-205ENST00000533464 GBP2P32456 591 aaPredicted RBP19.92■□□□□ 0.78
PHRF1-205ENST00000533464 SPECC1Q5M775 1068 aa19.92■□□□□ 0.78
PHRF1-205ENST00000533464 MYL10Q9BUA6 226 aa19.92■□□□□ 0.78
PHRF1-205ENST00000533464 SPDYE3A6NKU9 549 aa19.92■□□□□ 0.78
PHRF1-205ENST00000533464 DIS3L2Q8IYB7 885 aaKnown RBP19.92■□□□□ 0.78
PHRF1-205ENST00000533464 SAP30BPQ9UHR5 308 aaKnown RBP19.92■□□□□ 0.78
PHRF1-205ENST00000533464 BRD1O95696 1058 aa19.91■□□□□ 0.78
PHRF1-205ENST00000533464 TTC6Q86TZ1 520 aa19.91■□□□□ 0.78
PHRF1-205ENST00000533464 DYDC1Q8WWB3 177 aa19.91■□□□□ 0.78
PHRF1-205ENST00000533464 ZNF532Q9HCE3 1301 aa19.91■□□□□ 0.78
PHRF1-205ENST00000533464 KDRP35968 1356 aa19.91■□□□□ 0.78
PHRF1-205ENST00000533464 MYOM2P54296 1465 aa19.91■□□□□ 0.78
PHRF1-205ENST00000533464 PTH1RQ03431 593 aa19.91■□□□□ 0.78
PHRF1-205ENST00000533464 DRC1Q96MC2 740 aa19.91■□□□□ 0.78
PHRF1-205ENST00000533464 SHTN1A0MZ66 631 aa19.91■□□□□ 0.78
PHRF1-205ENST00000533464 TTLL7Q6ZT98 887 aa19.91■□□□□ 0.78
PHRF1-205ENST00000533464 A0A0D9SFI3 127 aa19.91■□□□□ 0.78
PHRF1-205ENST00000533464 ZNF445P59923 1031 aa19.91■□□□□ 0.78
PHRF1-205ENST00000533464 ME3Q16798 604 aa19.91■□□□□ 0.78
PHRF1-205ENST00000533464 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.91■□□□□ 0.78
PHRF1-205ENST00000533464 V9GYY5 206 aaPredicted RBP19.91■□□□□ 0.78
PHRF1-205ENST00000533464 IBTKQ9P2D0 1353 aaPredicted RBP19.91■□□□□ 0.78
PHRF1-205ENST00000533464 PARP1P09874 1014 aaKnown RBP19.9■□□□□ 0.78
PHRF1-205ENST00000533464 CCDC174Q6PII3 467 aa19.9■□□□□ 0.78
PHRF1-205ENST00000533464 SPATA5Q8NB90 893 aa19.9■□□□□ 0.78
PHRF1-205ENST00000533464 CLSTN2Q9H4D0 955 aa19.9■□□□□ 0.78
PHRF1-205ENST00000533464 KCNH3Q9ULD8 1083 aa19.9■□□□□ 0.78
PHRF1-205ENST00000533464 UFL1O94874 794 aa19.9■□□□□ 0.78
PHRF1-205ENST00000533464 VEZTQ9HBM0 779 aa19.9■□□□□ 0.78
PHRF1-205ENST00000533464 BCCIPQ9P287 314 aaKnown RBP eCLIP19.9■□□□□ 0.78
PHRF1-205ENST00000533464 CTAGE15A4D2H0 777 aa19.9■□□□□ 0.78
PHRF1-205ENST00000533464 CTAGE8P0CG41 777 aa19.9■□□□□ 0.78
PHRF1-205ENST00000533464 CTAGE6Q86UF2 777 aa19.9■□□□□ 0.78
PHRF1-205ENST00000533464 CTAGE4Q8IX94 777 aa19.9■□□□□ 0.78
PHRF1-205ENST00000533464 PHKBQ93100 1093 aa19.9■□□□□ 0.78
PHRF1-205ENST00000533464 E7EWF7 191 aa19.9■□□□□ 0.78
PHRF1-205ENST00000533464 UBXN1Q04323 297 aa19.9■□□□□ 0.78
PHRF1-205ENST00000533464 CTDSPL2Q05D32 466 aa19.89■□□□□ 0.78
PHRF1-205ENST00000533464 LETM2Q2VYF4 491 aa19.89■□□□□ 0.78
PHRF1-205ENST00000533464 DSCC1Q9BVC3 393 aa19.89■□□□□ 0.78
PHRF1-205ENST00000533464 PARP3Q9Y6F1 533 aa19.89■□□□□ 0.78
PHRF1-205ENST00000533464 ZRSR2Q15696 482 aaKnown RBP19.89■□□□□ 0.77
PHRF1-205ENST00000533464 CCDC24Q8N4L8 307 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms