RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 ARHGAP45Q92619 1136 aa14.14□□□□□ -0.15
CLCF1-202ENST00000533438 VEZTQ9HBM0 779 aa14.14□□□□□ -0.15
CLCF1-202ENST00000533438 ZNF70Q9UC06 446 aaPredicted RBP14.14□□□□□ -0.15
CLCF1-202ENST00000533438 FBXO3Q9UK99 471 aa14.14□□□□□ -0.15
CLCF1-202ENST00000533438 ZBED9Q6R2W3 1325 aa14.14□□□□□ -0.15
CLCF1-202ENST00000533438 UNCXA6NJT0 531 aa14.13□□□□□ -0.15
CLCF1-202ENST00000533438 CRKP46108 304 aa14.13□□□□□ -0.15
CLCF1-202ENST00000533438 HDLBPQ00341 1268 aaKnown RBP14.13□□□□□ -0.15
CLCF1-202ENST00000533438 CHAF1AQ13111 956 aaPredicted RBP14.13□□□□□ -0.15
CLCF1-202ENST00000533438 RASA3Q14644 834 aa14.13□□□□□ -0.15
CLCF1-202ENST00000533438 SUPT20HL1Q3ZLR7 823 aa14.13□□□□□ -0.15
CLCF1-202ENST00000533438 NBPF12Q5TAG4 269 aaPredicted RBP14.13□□□□□ -0.15
CLCF1-202ENST00000533438 TDRD3Q9H7E2 651 aaKnown RBP14.13□□□□□ -0.15
CLCF1-202ENST00000533438 FRAT2O75474 233 aaPredicted RBP14.12□□□□□ -0.15
CLCF1-202ENST00000533438 CIAO1O76071 339 aa14.12□□□□□ -0.15
CLCF1-202ENST00000533438 TNFAIP1Q13829 316 aa14.12□□□□□ -0.15
CLCF1-202ENST00000533438 PRPF38BQ5VTL8 546 aaKnown RBP14.12□□□□□ -0.15
CLCF1-202ENST00000533438 SPRYD7Q5W111 196 aa14.12□□□□□ -0.15
CLCF1-202ENST00000533438 INTS3Q68E01 1043 aaKnown RBP14.12□□□□□ -0.15
CLCF1-202ENST00000533438 LPIN2Q92539 896 aa14.12□□□□□ -0.15
CLCF1-202ENST00000533438 MEIS3Q99687 375 aa14.12□□□□□ -0.15
CLCF1-202ENST00000533438 MRIQ9BWK5 157 aa14.12□□□□□ -0.15
CLCF1-202ENST00000533438 LRRFIP2Q9Y608 721 aaKnown RBP14.12□□□□□ -0.15
CLCF1-202ENST00000533438 PPP1R12BO60237 982 aaPredicted RBP14.11□□□□□ -0.15
CLCF1-202ENST00000533438 USP2O75604 605 aaPredicted RBP14.11□□□□□ -0.15
CLCF1-202ENST00000533438 SLC5A1P13866 664 aa14.11□□□□□ -0.15
CLCF1-202ENST00000533438 SREBF2Q12772 1141 aa14.11□□□□□ -0.15
CLCF1-202ENST00000533438 MKRN3Q13064 507 aaKnown RBP14.11□□□□□ -0.15
CLCF1-202ENST00000533438 CLMNQ96JQ2 1002 aa14.11□□□□□ -0.15
CLCF1-202ENST00000533438 TEPSINQ96N21 525 aa14.11□□□□□ -0.15
CLCF1-202ENST00000533438 HPS5Q9UPZ3 1129 aa14.11□□□□□ -0.15
CLCF1-202ENST00000533438 HDAC5Q9UQL6 1122 aa14.11□□□□□ -0.15
CLCF1-202ENST00000533438 SUGT1Q9Y2Z0 365 aa14.11□□□□□ -0.15
CLCF1-202ENST00000533438 ZBTB48P10074 688 aaPredicted RBP14.1□□□□□ -0.15
CLCF1-202ENST00000533438 SOX10P56693 466 aa14.1□□□□□ -0.15
CLCF1-202ENST00000533438 SLC10A4Q96EP9 437 aa14.1□□□□□ -0.15
CLCF1-202ENST00000533438 ZDHHC15Q96MV8 337 aa14.1□□□□□ -0.15
CLCF1-202ENST00000533438 SIL1Q9H173 461 aa14.1□□□□□ -0.15
CLCF1-202ENST00000533438 TCP10L2B9ZVM9 353 aa14.09□□□□□ -0.15
CLCF1-202ENST00000533438 TBC1D8O95759 1140 aa14.09□□□□□ -0.15
CLCF1-202ENST00000533438 IREB2P48200 963 aaKnown RBP14.09□□□□□ -0.15
CLCF1-202ENST00000533438 CDAN1Q8IWY9 1227 aa14.09□□□□□ -0.15
CLCF1-202ENST00000533438 ZNF296Q8WUU4 475 aaPredicted RBP14.09□□□□□ -0.15
CLCF1-202ENST00000533438 TEKT1Q969V4 418 aa14.09□□□□□ -0.15
CLCF1-202ENST00000533438 WNK4Q96J92 1243 aa14.09□□□□□ -0.15
CLCF1-202ENST00000533438 COPRSQ9NQ92 184 aa14.09□□□□□ -0.15
CLCF1-202ENST00000533438 CEP126Q9P2H0 1117 aa14.09□□□□□ -0.15
CLCF1-202ENST00000533438 PA2G4Q9UQ80 394 aaKnown RBP14.09□□□□□ -0.15
CLCF1-202ENST00000533438 PDE4DIPQ5VU43 2346 aa14.09□□□□□ -0.15
CLCF1-202ENST00000533438 MAST3O60307 1309 aa14.09□□□□□ -0.15
CLCF1-202ENST00000533438 MANSC4A6NHS7 340 aaPredicted RBP14.08□□□□□ -0.16
CLCF1-202ENST00000533438 GPR25O00155 361 aa14.08□□□□□ -0.16
CLCF1-202ENST00000533438 ZBTB22O15209 634 aa14.08□□□□□ -0.16
CLCF1-202ENST00000533438 TRIM27P14373 513 aa14.08□□□□□ -0.16
CLCF1-202ENST00000533438 IL15P40933 162 aaPredicted RBP14.08□□□□□ -0.16
CLCF1-202ENST00000533438 TNNI2P48788 182 aa14.08□□□□□ -0.16
CLCF1-202ENST00000533438 MTX1Q13505 466 aa14.08□□□□□ -0.16
CLCF1-202ENST00000533438 ATP2B3Q16720 1220 aa14.08□□□□□ -0.16
CLCF1-202ENST00000533438 APOBEC3HQ6NTF7 200 aaKnown RBP14.08□□□□□ -0.16
CLCF1-202ENST00000533438 ANKRD13AQ8IZ07 590 aa14.08□□□□□ -0.16
CLCF1-202ENST00000533438 WDR66Q8TBY9 1149 aa14.08□□□□□ -0.16
CLCF1-202ENST00000533438 TMEM39BQ9GZU3 492 aa14.08□□□□□ -0.16
CLCF1-202ENST00000533438 BCAR3O75815 825 aa14.07□□□□□ -0.16
CLCF1-202ENST00000533438 GNAI3P08754 354 aa14.07□□□□□ -0.16
CLCF1-202ENST00000533438 GJA5P36382 358 aa14.07□□□□□ -0.16
CLCF1-202ENST00000533438 INHBEP58166 350 aa14.07□□□□□ -0.16
CLCF1-202ENST00000533438 FBXO46Q6PJ61 603 aaPredicted RBP14.07□□□□□ -0.16
CLCF1-202ENST00000533438 HHIPL2Q6UWX4 724 aa14.07□□□□□ -0.16
CLCF1-202ENST00000533438 TNNQ9UQP3 1299 aa14.07□□□□□ -0.16
CLCF1-202ENST00000533438 MYH2Q9UKX2 1941 aa14.06□□□□□ -0.16
CLCF1-202ENST00000533438 IPO8O15397 1037 aaKnown RBP14.06□□□□□ -0.16
CLCF1-202ENST00000533438 ALDH1A1P00352 501 aa14.06□□□□□ -0.16
CLCF1-202ENST00000533438 CACNB3P54284 484 aa14.06□□□□□ -0.16
CLCF1-202ENST00000533438 FKBP1CQ5VVH2 108 aa14.06□□□□□ -0.16
CLCF1-202ENST00000533438 ATF7IPQ6VMQ6 1270 aa14.06□□□□□ -0.16
CLCF1-202ENST00000533438 FAM83AQ86UY5 434 aa14.06□□□□□ -0.16
CLCF1-202ENST00000533438 IFNL1Q8IU54 200 aa14.06□□□□□ -0.16
CLCF1-202ENST00000533438 R3HDMLQ9H3Y0 253 aa14.06□□□□□ -0.16
CLCF1-202ENST00000533438 RPAP1Q9BWH6 1393 aaPredicted RBP14.06□□□□□ -0.16
CLCF1-202ENST00000533438 HTTP42858 3142 aa14.06□□□□□ -0.16
CLCF1-202ENST00000533438 IGF2BP3O00425 579 aaKnown RBP eCLIP14.05□□□□□ -0.16
CLCF1-202ENST00000533438 PRDX5P30044 214 aa14.05□□□□□ -0.16
CLCF1-202ENST00000533438 PHKA1P46020 1223 aa14.05□□□□□ -0.16
CLCF1-202ENST00000533438 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.05□□□□□ -0.16
CLCF1-202ENST00000533438 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.05□□□□□ -0.16
CLCF1-202ENST00000533438 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.05□□□□□ -0.16
CLCF1-202ENST00000533438 SALL1Q9NSC2 1324 aa14.05□□□□□ -0.16
CLCF1-202ENST00000533438 TESPA1A2RU30 521 aaPredicted RBP14.04□□□□□ -0.16
CLCF1-202ENST00000533438 SEMA3EO15041 775 aa14.04□□□□□ -0.16
CLCF1-202ENST00000533438 SRGAP3O43295 1099 aa14.04□□□□□ -0.16
CLCF1-202ENST00000533438 ADORA1P30542 326 aa14.04□□□□□ -0.16
CLCF1-202ENST00000533438 CCDC102BQ68D86 513 aa14.04□□□□□ -0.16
CLCF1-202ENST00000533438 FRAT1Q92837 279 aaPredicted RBP14.04□□□□□ -0.16
CLCF1-202ENST00000533438 ELP3Q9H9T3 547 aa14.04□□□□□ -0.16
CLCF1-202ENST00000533438 GNL3LQ9NVN8 582 aaKnown RBP14.04□□□□□ -0.16
CLCF1-202ENST00000533438 TMOD2Q9NZR1 351 aa14.04□□□□□ -0.16
CLCF1-202ENST00000533438 DENND2AQ9ULE3 1009 aa14.04□□□□□ -0.16
CLCF1-202ENST00000533438 DAGLAQ9Y4D2 1042 aa14.04□□□□□ -0.16
CLCF1-202ENST00000533438 FKTNO75072 461 aa14.03□□□□□ -0.16
CLCF1-202ENST00000533438 TIMM10P62072 90 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms