RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 UBE2Q2LH0YL09 131 aa37.52■■■■□ 3.6
SSSCA1-207ENST00000533115 SLC10A3P09131 477 aa37.52■■■■□ 3.6
SSSCA1-207ENST00000533115 ADORA1P30542 326 aa37.52■■■■□ 3.6
SSSCA1-207ENST00000533115 TIMM10P62072 90 aa37.52■■■■□ 3.6
SSSCA1-207ENST00000533115 SPDYE2Q495Y8 402 aa37.52■■■■□ 3.6
SSSCA1-207ENST00000533115 TDRD3Q9H7E2 651 aaKnown RBP37.52■■■■□ 3.6
SSSCA1-207ENST00000533115 ZNF70Q9UC06 446 aaPredicted RBP37.52■■■■□ 3.6
SSSCA1-207ENST00000533115 PHKA1P46020 1223 aa37.51■■■■□ 3.6
SSSCA1-207ENST00000533115 ATP8B2P98198 1209 aa37.51■■■■□ 3.6
SSSCA1-207ENST00000533115 TEKT1Q969V4 418 aa37.51■■■■□ 3.6
SSSCA1-207ENST00000533115 MRIQ9BWK5 157 aa37.51■■■■□ 3.6
SSSCA1-207ENST00000533115 C1orf115Q9H7X2 142 aa37.51■■■■□ 3.6
SSSCA1-207ENST00000533115 PRDM10Q9NQV6 1147 aa37.51■■■■□ 3.6
SSSCA1-207ENST00000533115 MAST3O60307 1309 aa37.51■■■■□ 3.6
SSSCA1-207ENST00000533115 HSPA8P11142 646 aaKnown RBP37.5■■■■□ 3.59
SSSCA1-207ENST00000533115 G3BP1Q13283 466 aaKnown RBP eCLIP37.5■■■■□ 3.59
SSSCA1-207ENST00000533115 POLA2Q14181 598 aa37.5■■■■□ 3.59
SSSCA1-207ENST00000533115 PANK1Q8TE04 598 aa37.5■■■■□ 3.59
SSSCA1-207ENST00000533115 A0A1B0GUL7 405 aa37.49■■■■□ 3.59
SSSCA1-207ENST00000533115 SEMA3EO15041 775 aa37.49■■■■□ 3.59
SSSCA1-207ENST00000533115 LBX1P52954 281 aa37.49■■■■□ 3.59
SSSCA1-207ENST00000533115 CCDC102BQ68D86 513 aa37.49■■■■□ 3.59
SSSCA1-207ENST00000533115 DENND2AQ9ULE3 1009 aa37.49■■■■□ 3.59
SSSCA1-207ENST00000533115 ZBTB22O15209 634 aa37.48■■■■□ 3.59
SSSCA1-207ENST00000533115 MS4A1P11836 297 aa37.48■■■■□ 3.59
SSSCA1-207ENST00000533115 IFFO2Q5TF58 517 aa37.48■■■■□ 3.59
SSSCA1-207ENST00000533115 ARMC9Q7Z3E5 817 aa37.48■■■■□ 3.59
SSSCA1-207ENST00000533115 RASAL3Q86YV0 1011 aa37.48■■■■□ 3.59
SSSCA1-207ENST00000533115 SSH3Q8TE77 659 aa37.48■■■■□ 3.59
SSSCA1-207ENST00000533115 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP37.48■■■■□ 3.59
SSSCA1-207ENST00000533115 TNFAIP1Q13829 316 aa37.47■■■■□ 3.59
SSSCA1-207ENST00000533115 PRKG1Q13976 671 aa37.47■■■■□ 3.59
SSSCA1-207ENST00000533115 RASA3Q14644 834 aa37.47■■■■□ 3.59
SSSCA1-207ENST00000533115 KIF23Q02241 960 aaPredicted RBP37.46■■■■□ 3.59
SSSCA1-207ENST00000533115 XAGE2Q96GT9 111 aa37.46■■■■□ 3.59
SSSCA1-207ENST00000533115 ZDHHC15Q96MV8 337 aa37.46■■■■□ 3.59
SSSCA1-207ENST00000533115 SUPT20HL1Q3ZLR7 823 aa37.45■■■■□ 3.59
SSSCA1-207ENST00000533115 RCAN3Q9UKA8 241 aa37.45■■■■□ 3.59
SSSCA1-207ENST00000533115 CA12O43570 354 aa37.44■■■■□ 3.58
SSSCA1-207ENST00000533115 HHIPL2Q6UWX4 724 aa37.44■■■■□ 3.58
SSSCA1-207ENST00000533115 NEUROD6Q96NK8 337 aa37.44■■■■□ 3.58
SSSCA1-207ENST00000533115 SSC5DA1L4H1 1573 aa37.43■■■■□ 3.58
SSSCA1-207ENST00000533115 SALL1Q9NSC2 1324 aa37.43■■■■□ 3.58
SSSCA1-207ENST00000533115 MVPQ14764 893 aaKnown RBP37.43■■■■□ 3.58
SSSCA1-207ENST00000533115 NBPF12Q5TAG4 269 aaPredicted RBP37.43■■■■□ 3.58
SSSCA1-207ENST00000533115 ANGEL1Q9UNK9 670 aaKnown RBP37.43■■■■□ 3.58
SSSCA1-207ENST00000533115 TNS4Q8IZW8 715 aa37.42■■■■□ 3.58
SSSCA1-207ENST00000533115 TCP10L2B9ZVM9 353 aa37.41■■■■□ 3.58
SSSCA1-207ENST00000533115 PRDX5P30044 214 aa37.41■■■■□ 3.58
SSSCA1-207ENST00000533115 APOBEC3HQ6NTF7 200 aaKnown RBP37.41■■■■□ 3.58
SSSCA1-207ENST00000533115 FZD1Q9UP38 647 aa37.41■■■■□ 3.58
SSSCA1-207ENST00000533115 PPP1R12BO60237 982 aaPredicted RBP37.4■■■■□ 3.58
SSSCA1-207ENST00000533115 LDHBP07195 334 aaKnown RBP37.4■■■■□ 3.58
SSSCA1-207ENST00000533115 TNNI2P48788 182 aa37.4■■■■□ 3.58
SSSCA1-207ENST00000533115 RASGRF1Q13972 1273 aa37.4■■■■□ 3.58
SSSCA1-207ENST00000533115 MAP3K11Q16584 847 aa37.4■■■■□ 3.58
SSSCA1-207ENST00000533115 LDLRAD1Q5T700 205 aa37.4■■■■□ 3.58
SSSCA1-207ENST00000533115 PDS5AQ29RF7 1337 aaKnown RBP37.39■■■■□ 3.58
SSSCA1-207ENST00000533115 TSKSQ9UJT2 592 aa37.39■■■■□ 3.58
SSSCA1-207ENST00000533115 SURF6O75683 361 aaKnown RBP37.38■■■■□ 3.57
SSSCA1-207ENST00000533115 OS9Q13438 667 aaPredicted RBP37.38■■■■□ 3.57
SSSCA1-207ENST00000533115 CSRNP1Q96S65 589 aa37.38■■■■□ 3.57
SSSCA1-207ENST00000533115 GORABQ5T7V8 394 aa37.37■■■■□ 3.57
SSSCA1-207ENST00000533115 CEP85Q6P2H3 762 aa37.37■■■■□ 3.57
SSSCA1-207ENST00000533115 REM2Q8IYK8 340 aaPredicted RBP37.37■■■■□ 3.57
SSSCA1-207ENST00000533115 ZGPATQ8N5A5 531 aaKnown RBP37.37■■■■□ 3.57
SSSCA1-207ENST00000533115 TMOD2Q9NZR1 351 aa37.37■■■■□ 3.57
SSSCA1-207ENST00000533115 CACNB3P54284 484 aa37.36■■■■□ 3.57
SSSCA1-207ENST00000533115 DIXDC1Q155Q3 683 aa37.36■■■■□ 3.57
SSSCA1-207ENST00000533115 TEPSINQ96N21 525 aa37.36■■■■□ 3.57
SSSCA1-207ENST00000533115 TMEM39BQ9GZU3 492 aa37.36■■■■□ 3.57
SSSCA1-207ENST00000533115 NOP58Q9Y2X3 529 aaKnown RBP37.36■■■■□ 3.57
SSSCA1-207ENST00000533115 GPR108Q9NPR9 543 aa37.35■■■■□ 3.57
SSSCA1-207ENST00000533115 DAGLAQ9Y4D2 1042 aa37.35■■■■□ 3.57
SSSCA1-207ENST00000533115 IREB2P48200 963 aaKnown RBP37.33■■■■□ 3.57
SSSCA1-207ENST00000533115 FKBP1CQ5VVH2 108 aa37.33■■■■□ 3.57
SSSCA1-207ENST00000533115 CDAN1Q8IWY9 1227 aa37.33■■■■□ 3.57
SSSCA1-207ENST00000533115 DDX19BQ9UMR2 479 aa37.33■■■■□ 3.57
SSSCA1-207ENST00000533115 COG6Q9Y2V7 657 aa37.33■■■■□ 3.57
SSSCA1-207ENST00000533115 UNCXA6NJT0 531 aa37.32■■■■□ 3.56
SSSCA1-207ENST00000533115 USP2O75604 605 aaPredicted RBP37.32■■■■□ 3.56
SSSCA1-207ENST00000533115 TNNI3KQ59H18 835 aa37.32■■■■□ 3.56
SSSCA1-207ENST00000533115 SAGE1Q9NXZ1 904 aa37.32■■■■□ 3.56
SSSCA1-207ENST00000533115 FPGT-TNNI3KV9GXZ4 949 aa37.32■■■■□ 3.56
SSSCA1-207ENST00000533115 FAM83AQ86UY5 434 aa37.31■■■■□ 3.56
SSSCA1-207ENST00000533115 ABCF2Q9UG63 623 aa37.31■■■■□ 3.56
SSSCA1-207ENST00000533115 ARID4AP29374 1257 aaPredicted RBP37.3■■■■□ 3.56
SSSCA1-207ENST00000533115 SPTY2D1Q68D10 685 aaPredicted RBP37.3■■■■□ 3.56
SSSCA1-207ENST00000533115 SLC10A4Q96EP9 437 aa37.3■■■■□ 3.56
SSSCA1-207ENST00000533115 RNF186Q9NXI6 227 aa37.3■■■■□ 3.56
SSSCA1-207ENST00000533115 HMG20BQ9P0W2 317 aa37.3■■■■□ 3.56
SSSCA1-207ENST00000533115 MKRN3Q13064 507 aaKnown RBP37.29■■■■□ 3.56
SSSCA1-207ENST00000533115 SPATA5Q8NB90 893 aa37.29■■■■□ 3.56
SSSCA1-207ENST00000533115 CLMNQ96JQ2 1002 aa37.29■■■■□ 3.56
SSSCA1-207ENST00000533115 AKAP11Q9UKA4 1901 aa37.29■■■■□ 3.56
SSSCA1-207ENST00000533115 SPRYD7Q5W111 196 aa37.28■■■■□ 3.56
SSSCA1-207ENST00000533115 TRPA1O75762 1119 aa37.27■■■■□ 3.56
SSSCA1-207ENST00000533115 UQCRFS1P1P0C7P4 283 aa37.27■■■■□ 3.56
SSSCA1-207ENST00000533115 CDC42EP5Q6NZY7 148 aa37.27■■■■□ 3.56
SSSCA1-207ENST00000533115 DZIP1Q86YF9 867 aaKnown RBP37.27■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms